Warning: Permanently added '172.25.95.191' (ECDSA) to the list of known hosts. Running: /usr/bin/copr-rpmbuild --verbose --drop-resultdir --build-id 829473 --chroot epel-7-x86_64 --detached default Version: 0.22 Task: {'build_id': 829473, 'buildroot_pkgs': [], 'chroot': 'epel-7-x86_64', 'enable_net': False, 'fetch_sources_only': True, 'git_hash': 'eeeeea7e749f22cfbc766278af9ece494b6e098a', 'git_repo': '@scitech/openmpi4.0/lammps', 'memory_reqs': 2048, 'package_name': 'lammps', 'package_version': '20180822-3.fc30', 'project_dirname': 'openmpi4.0', 'project_name': 'openmpi4.0', 'project_owner': '@scitech', 'repos': [{'id': 'copr_base', 'name': 'Copr repository', 'url': 'https://copr-be.cloud.fedoraproject.org/results/@scitech/openmpi4.0/epel-7-x86_64/'}], 'source_json': {'clone_url': 'https://copr-dist-git.fedorainfracloud.org/git/@scitech/openmpi4.0/lammps.git', 'committish': 'eeeeea7e749f22cfbc766278af9ece494b6e098a'}, 'source_type': 8, 'submitter': 'orion', 'task_id': '829473-epel-7-x86_64', 'timeout': 64800, 'use_bootstrap_container': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/@scitech/openmpi4.0/lammps.git /tmp/tmpao0ym_q1/lammps --depth 500 --no-single-branch cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/@scitech/openmpi4.0/lammps.git', '/tmp/tmpao0ym_q1/lammps', '--depth', '500', '--no-single-branch'] cwd: . rc: 0 stdout: stderr: Cloning into '/tmp/tmpao0ym_q1/lammps'... Running: git checkout eeeeea7e749f22cfbc766278af9ece494b6e098a cmd: ['git', 'checkout', 'eeeeea7e749f22cfbc766278af9ece494b6e098a'] cwd: /tmp/tmpao0ym_q1/lammps rc: 0 stdout: stderr: Note: checking out 'eeeeea7e749f22cfbc766278af9ece494b6e098a'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by performing another checkout. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -b with the checkout command again. Example: git checkout -b HEAD is now at eeeeea7 automatic import of lammps 20180822-3.fc30 Running: cp -r . /tmp/tmpcy_i267q cmd: ['cp', '-r', '.', '/tmp/tmpcy_i267q'] cwd: /tmp/tmpao0ym_q1/lammps rc: 0 stdout: stderr: Generated rpkg config: [rpkg] preprocess_spec = True # auto-packing is deprecated: auto_pack = True [git] lookaside = https://copr-dist-git.fedorainfracloud.org/repo/pkgs/%(ns2)s/%(ns1)s/%(name)s/%(filename)s/%(hashtype)s/%(hash)s/%(filename)s anongiturl = https://copr-dist-git.fedorainfracloud.org/git/%(module)s Writing config into /tmp/tmpao0ym_q1/.config/rpkg.conf Running: rpkg -C /tmp/tmpao0ym_q1/.config/rpkg.conf sources --outdir /tmp/tmpcy_i267q cmd: ['rpkg', '-C', '/tmp/tmpao0ym_q1/.config/rpkg.conf', 'sources', '--outdir', '/tmp/tmpcy_i267q'] cwd: /tmp/tmpao0ym_q1/lammps rc: 0 stdout: Downloading lammps-stable_22Aug2018.tar.gz from lookaside cache at copr-dist-git.fedorainfracloud.org stderr: /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running: unbuffer /usr/bin/mock --buildsrpm --spec /tmp/tmpcy_i267q/lammps.spec --sources /tmp/tmpcy_i267q --configdir /var/lib/copr-rpmbuild/results/configs --resultdir /var/lib/copr-rpmbuild/results --define %_disable_source_fetch 0 --uniqueext 1543211100.717137 -r child WARNING: Could not find required logging config file: /var/lib/copr-rpmbuild/results/configs/logging.ini. Using default... INFO: mock.py version 1.4.13 starting (python version = 3.6.5)... Start: init plugins INFO: tmpfs initialized INFO: selinux disabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins Start: run INFO: Start(/tmp/tmpcy_i267q/lammps.spec) Config(829473-epel-7-x86_64) Start: clean chroot Finish: clean chroot Start: chroot init INFO: mounting tmpfs at /var/lib/mock/829473-epel-7-x86_64-1543211100.717137/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled HW Info plugin Mock Version: 1.4.13 INFO: Mock Version: 1.4.13 Start: yum install Yum command has been deprecated, use dnf instead. See 'man dnf' and 'man yum2dnf' for more information. copr_base | 3.5 kB 00:00 base | 3.6 kB 00:00 epel | 3.2 kB 00:00 extras | 3.4 kB 00:00 sclo | 2.9 kB 00:00 sclo-rh | 3.0 kB 00:00 updates | 3.4 kB 00:00 (1/7): copr_base/primary_db | 43 kB 00:00 (2/7): epel/primary | 3.6 MB 00:00 (3/7): extras/primary_db | 205 kB 00:00 (4/7): updates/primary_db | 6.0 MB 00:00 (5/7): sclo/primary_db | 294 kB 00:01 (6/7): base/primary_db | 5.9 MB 00:01 (7/7): sclo-rh/primary_db | 3.7 MB 00:01 epel 12719/12719 base/group_gz | 166 kB 00:00 epel/group_gz | 88 kB 00:00 Resolving Dependencies --> Running transaction check ---> Package bash.x86_64 0:4.2.46-30.el7 will be installed --> Processing Dependency: rtld(GNU_HASH) for package: bash-4.2.46-30.el7.x86_64 --> Processing Dependency: libdl.so.2(GLIBC_2.2.5)(64bit) for package: bash-4.2.46-30.el7.x86_64 --> Processing Dependency: libc.so.6(GLIBC_2.15)(64bit) for package: bash-4.2.46-30.el7.x86_64 --> Processing Dependency: libtinfo.so.5()(64bit) for package: bash-4.2.46-30.el7.x86_64 --> Processing Dependency: libdl.so.2()(64bit) for package: bash-4.2.46-30.el7.x86_64 ---> Package bzip2.x86_64 0:1.0.6-13.el7 will be installed --> Processing Dependency: bzip2-libs = 1.0.6-13.el7 for package: bzip2-1.0.6-13.el7.x86_64 --> Processing Dependency: libbz2.so.1()(64bit) for package: bzip2-1.0.6-13.el7.x86_64 ---> Package coreutils.x86_64 0:8.22-21.el7 will be installed --> Processing Dependency: ncurses for package: coreutils-8.22-21.el7.x86_64 --> Processing Dependency: libcrypto.so.10(libcrypto.so.10)(64bit) for package: coreutils-8.22-21.el7.x86_64 --> Processing Dependency: libattr.so.1(ATTR_1.1)(64bit) for package: coreutils-8.22-21.el7.x86_64 --> Processing Dependency: libacl.so.1(ACL_1.0)(64bit) for package: coreutils-8.22-21.el7.x86_64 --> Processing Dependency: gmp for package: coreutils-8.22-21.el7.x86_64 --> Processing Dependency: libselinux.so.1()(64bit) for package: coreutils-8.22-21.el7.x86_64 --> Processing Dependency: libgmp.so.10()(64bit) for package: coreutils-8.22-21.el7.x86_64 --> Processing Dependency: libcrypto.so.10()(64bit) for package: coreutils-8.22-21.el7.x86_64 --> Processing Dependency: libcap.so.2()(64bit) for package: coreutils-8.22-21.el7.x86_64 --> Processing Dependency: libattr.so.1()(64bit) for package: coreutils-8.22-21.el7.x86_64 --> Processing Dependency: libacl.so.1()(64bit) for package: coreutils-8.22-21.el7.x86_64 ---> Package cpio.x86_64 0:2.11-27.el7 will be installed ---> Package diffutils.x86_64 0:3.3-4.el7 will be installed ---> Package epel-release.noarch 0:7-11 will be installed --> Processing Dependency: redhat-release >= 7 for package: epel-release-7-11.noarch ---> Package epel-rpm-macros.noarch 0:7-19 will be installed --> Processing Dependency: python2-rpm-macros for package: epel-rpm-macros-7-19.noarch --> Processing Dependency: python-srpm-macros for package: epel-rpm-macros-7-19.noarch --> Processing Dependency: python-rpm-macros for package: epel-rpm-macros-7-19.noarch ---> Package findutils.x86_64 1:4.5.11-5.el7 will be installed ---> Package gawk.x86_64 0:4.0.2-4.el7_3.1 will be installed ---> Package gcc.x86_64 0:4.8.5-28.el7_5.1 will be installed --> Processing Dependency: libgomp = 4.8.5-28.el7_5.1 for package: gcc-4.8.5-28.el7_5.1.x86_64 --> Processing Dependency: cpp = 4.8.5-28.el7_5.1 for package: gcc-4.8.5-28.el7_5.1.x86_64 --> Processing Dependency: libgcc >= 4.8.5-28.el7_5.1 for package: gcc-4.8.5-28.el7_5.1.x86_64 --> Processing Dependency: glibc-devel >= 2.2.90-12 for package: gcc-4.8.5-28.el7_5.1.x86_64 --> Processing Dependency: binutils >= 2.20.51.0.2-12 for package: gcc-4.8.5-28.el7_5.1.x86_64 --> Processing Dependency: libz.so.1()(64bit) for package: gcc-4.8.5-28.el7_5.1.x86_64 --> Processing Dependency: libmpfr.so.4()(64bit) for package: gcc-4.8.5-28.el7_5.1.x86_64 --> Processing Dependency: libmpc.so.3()(64bit) for package: gcc-4.8.5-28.el7_5.1.x86_64 --> Processing Dependency: libgomp.so.1()(64bit) for package: gcc-4.8.5-28.el7_5.1.x86_64 --> Processing Dependency: libgcc_s.so.1()(64bit) for package: gcc-4.8.5-28.el7_5.1.x86_64 ---> Package gcc-c++.x86_64 0:4.8.5-28.el7_5.1 will be installed --> Processing Dependency: libstdc++-devel = 4.8.5-28.el7_5.1 for package: gcc-c++-4.8.5-28.el7_5.1.x86_64 --> Processing Dependency: libstdc++ = 4.8.5-28.el7_5.1 for package: gcc-c++-4.8.5-28.el7_5.1.x86_64 --> Processing Dependency: libstdc++.so.6()(64bit) for package: gcc-c++-4.8.5-28.el7_5.1.x86_64 ---> Package grep.x86_64 0:2.20-3.el7 will be installed --> Processing Dependency: libpcre.so.1()(64bit) for package: grep-2.20-3.el7.x86_64 ---> Package gzip.x86_64 0:1.5-10.el7 will be installed ---> Package info.x86_64 0:5.1-5.el7 will be installed ---> Package make.x86_64 1:3.82-23.el7 will be installed ---> Package patch.x86_64 0:2.7.1-10.el7_5 will be installed ---> Package redhat-rpm-config.noarch 0:9.1.0-80.el7.centos will be installed --> Processing Dependency: rpm >= 4.9.0 for package: redhat-rpm-config-9.1.0-80.el7.centos.noarch --> Processing Dependency: dwz >= 0.4 for package: redhat-rpm-config-9.1.0-80.el7.centos.noarch --> Processing Dependency: zip for package: redhat-rpm-config-9.1.0-80.el7.centos.noarch --> Processing Dependency: perl-srpm-macros for package: redhat-rpm-config-9.1.0-80.el7.centos.noarch --> Processing Dependency: perl(Getopt::Long) for package: redhat-rpm-config-9.1.0-80.el7.centos.noarch --> Processing Dependency: /usr/bin/perl for package: redhat-rpm-config-9.1.0-80.el7.centos.noarch ---> Package rpm-build.x86_64 0:4.11.3-32.el7 will be installed --> Processing Dependency: pkgconfig >= 1:0.24 for package: rpm-build-4.11.3-32.el7.x86_64 --> Processing Dependency: elfutils >= 0.128 for package: rpm-build-4.11.3-32.el7.x86_64 --> Processing Dependency: perl(threads) for package: rpm-build-4.11.3-32.el7.x86_64 --> Processing Dependency: perl(Thread::Queue) for package: rpm-build-4.11.3-32.el7.x86_64 --> Processing Dependency: perl(File::Temp) for package: rpm-build-4.11.3-32.el7.x86_64 --> Processing Dependency: libpopt.so.0(LIBPOPT_0)(64bit) for package: rpm-build-4.11.3-32.el7.x86_64 --> Processing Dependency: libelf.so.1(ELFUTILS_1.0)(64bit) for package: rpm-build-4.11.3-32.el7.x86_64 --> Processing Dependency: file for package: rpm-build-4.11.3-32.el7.x86_64 --> Processing Dependency: /usr/bin/gdb-add-index for package: rpm-build-4.11.3-32.el7.x86_64 --> Processing Dependency: librpmio.so.3()(64bit) for package: rpm-build-4.11.3-32.el7.x86_64 --> Processing Dependency: librpmbuild.so.3()(64bit) for package: rpm-build-4.11.3-32.el7.x86_64 --> Processing Dependency: librpm.so.3()(64bit) for package: rpm-build-4.11.3-32.el7.x86_64 --> Processing Dependency: libpopt.so.0()(64bit) for package: rpm-build-4.11.3-32.el7.x86_64 --> Processing Dependency: libnss3.so()(64bit) for package: rpm-build-4.11.3-32.el7.x86_64 --> Processing Dependency: libmagic.so.1()(64bit) for package: rpm-build-4.11.3-32.el7.x86_64 --> Processing Dependency: liblzma.so.5()(64bit) for package: rpm-build-4.11.3-32.el7.x86_64 --> Processing Dependency: liblua-5.1.so()(64bit) for package: rpm-build-4.11.3-32.el7.x86_64 --> Processing Dependency: libelf.so.1()(64bit) for package: rpm-build-4.11.3-32.el7.x86_64 --> Processing Dependency: libdb-5.3.so()(64bit) for package: rpm-build-4.11.3-32.el7.x86_64 ---> Package sed.x86_64 0:4.2.2-5.el7 will be installed ---> Package shadow-utils.x86_64 2:4.1.5.1-24.el7 will be installed --> Processing Dependency: audit-libs >= 1.6.5 for package: 2:shadow-utils-4.1.5.1-24.el7.x86_64 --> Processing Dependency: setup for package: 2:shadow-utils-4.1.5.1-24.el7.x86_64 --> Processing Dependency: libsemanage.so.1(LIBSEMANAGE_1.0)(64bit) for package: 2:shadow-utils-4.1.5.1-24.el7.x86_64 --> Processing Dependency: libsemanage.so.1()(64bit) for package: 2:shadow-utils-4.1.5.1-24.el7.x86_64 --> Processing Dependency: libaudit.so.1()(64bit) for package: 2:shadow-utils-4.1.5.1-24.el7.x86_64 ---> Package tar.x86_64 2:1.26-34.el7 will be installed ---> Package unzip.x86_64 0:6.0-19.el7 will be installed ---> Package util-linux.x86_64 0:2.23.2-52.el7_5.1 will be installed --> Processing Dependency: libuuid = 2.23.2-52.el7_5.1 for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libmount = 2.23.2-52.el7_5.1 for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libblkid = 2.23.2-52.el7_5.1 for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: pam >= 1.1.3-7 for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libuuid.so.1(UUID_1.0)(64bit) for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libutempter.so.0(UTEMPTER_1.1)(64bit) for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libudev.so.1(LIBUDEV_183)(64bit) for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libsystemd.so.0(LIBSYSTEMD_209)(64bit) for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libpam_misc.so.0(LIBPAM_MISC_1.0)(64bit) for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libpam.so.0(LIBPAM_1.0)(64bit) for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libmount.so.1(MOUNT_2.25)(64bit) for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libmount.so.1(MOUNT_2.23)(64bit) for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libmount.so.1(MOUNT_2.22)(64bit) for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libmount.so.1(MOUNT_2.21)(64bit) for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libmount.so.1(MOUNT_2.20)(64bit) for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libmount.so.1(MOUNT_2.19)(64bit) for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libblkid.so.1(BLKID_2.21)(64bit) for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libblkid.so.1(BLKID_2.20)(64bit) for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libblkid.so.1(BLKID_2.18)(64bit) for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libblkid.so.1(BLKID_2.17)(64bit) for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libblkid.so.1(BLKID_2.15)(64bit) for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libblkid.so.1(BLKID_1.0)(64bit) for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: /etc/pam.d/system-auth for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libuuid.so.1()(64bit) for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libutempter.so.0()(64bit) for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libuser.so.1()(64bit) for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libudev.so.1()(64bit) for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libsystemd.so.0()(64bit) for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libpam_misc.so.0()(64bit) for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libpam.so.0()(64bit) for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libmount.so.1()(64bit) for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libcap-ng.so.0()(64bit) for package: util-linux-2.23.2-52.el7_5.1.x86_64 --> Processing Dependency: libblkid.so.1()(64bit) for package: util-linux-2.23.2-52.el7_5.1.x86_64 ---> Package which.x86_64 0:2.20-7.el7 will be installed ---> Package xz.x86_64 0:5.2.2-1.el7 will be installed --> Running transaction check ---> Package audit-libs.x86_64 0:2.8.1-3.el7_5.1 will be installed ---> Package binutils.x86_64 0:2.27-28.base.el7_5.1 will be installed --> Processing Dependency: /usr/sbin/alternatives for package: binutils-2.27-28.base.el7_5.1.x86_64 --> Processing Dependency: /usr/sbin/alternatives for package: binutils-2.27-28.base.el7_5.1.x86_64 ---> Package bzip2-libs.x86_64 0:1.0.6-13.el7 will be installed ---> Package centos-release.x86_64 0:7-5.1804.5.el7.centos will be installed ---> Package cpp.x86_64 0:4.8.5-28.el7_5.1 will be installed --> Processing Dependency: filesystem >= 3 for package: cpp-4.8.5-28.el7_5.1.x86_64 ---> Package dwz.x86_64 0:0.11-3.el7 will be installed ---> Package elfutils.x86_64 0:0.170-4.el7 will be installed --> Processing Dependency: elfutils-libs(x86-64) = 0.170-4.el7 for package: elfutils-0.170-4.el7.x86_64 --> Processing Dependency: libdw.so.1(ELFUTILS_0.167)(64bit) for package: elfutils-0.170-4.el7.x86_64 --> Processing Dependency: libdw.so.1(ELFUTILS_0.165)(64bit) for package: elfutils-0.170-4.el7.x86_64 --> Processing Dependency: libdw.so.1(ELFUTILS_0.158)(64bit) for package: elfutils-0.170-4.el7.x86_64 --> Processing Dependency: libdw.so.1(ELFUTILS_0.149)(64bit) for package: elfutils-0.170-4.el7.x86_64 --> Processing Dependency: libdw.so.1(ELFUTILS_0.148)(64bit) for package: elfutils-0.170-4.el7.x86_64 --> Processing Dependency: libdw.so.1(ELFUTILS_0.138)(64bit) for package: elfutils-0.170-4.el7.x86_64 --> Processing Dependency: libdw.so.1(ELFUTILS_0.130)(64bit) for package: elfutils-0.170-4.el7.x86_64 --> Processing Dependency: libdw.so.1(ELFUTILS_0.127)(64bit) for package: elfutils-0.170-4.el7.x86_64 --> Processing Dependency: libdw.so.1(ELFUTILS_0.126)(64bit) for package: elfutils-0.170-4.el7.x86_64 --> Processing Dependency: libdw.so.1(ELFUTILS_0.122)(64bit) for package: elfutils-0.170-4.el7.x86_64 --> Processing Dependency: libasm.so.1(ELFUTILS_1.0)(64bit) for package: elfutils-0.170-4.el7.x86_64 --> Processing Dependency: libdw.so.1()(64bit) for package: elfutils-0.170-4.el7.x86_64 --> Processing Dependency: libasm.so.1()(64bit) for package: elfutils-0.170-4.el7.x86_64 ---> Package elfutils-libelf.x86_64 0:0.170-4.el7 will be installed ---> Package file.x86_64 0:5.11-33.el7 will be installed ---> Package file-libs.x86_64 0:5.11-33.el7 will be installed ---> Package gdb.x86_64 0:7.6.1-110.el7 will be installed --> Processing Dependency: libreadline.so.6()(64bit) for package: gdb-7.6.1-110.el7.x86_64 --> Processing Dependency: libpython2.7.so.1.0()(64bit) for package: gdb-7.6.1-110.el7.x86_64 --> Processing Dependency: libexpat.so.1()(64bit) for package: gdb-7.6.1-110.el7.x86_64 ---> Package glibc.x86_64 0:2.17-222.el7 will be installed --> Processing Dependency: glibc-common = 2.17-222.el7 for package: glibc-2.17-222.el7.x86_64 --> Processing Dependency: libfreebl3.so(NSSRAWHASH_3.12.3)(64bit) for package: glibc-2.17-222.el7.x86_64 --> Processing Dependency: basesystem for package: glibc-2.17-222.el7.x86_64 --> Processing Dependency: libfreebl3.so()(64bit) for package: glibc-2.17-222.el7.x86_64 ---> Package glibc-devel.x86_64 0:2.17-222.el7 will be installed --> Processing Dependency: glibc-headers = 2.17-222.el7 for package: glibc-devel-2.17-222.el7.x86_64 --> Processing Dependency: glibc-headers for package: glibc-devel-2.17-222.el7.x86_64 ---> Package gmp.x86_64 1:6.0.0-15.el7 will be installed ---> Package libacl.x86_64 0:2.2.51-14.el7 will be installed ---> Package libattr.x86_64 0:2.4.46-13.el7 will be installed ---> Package libblkid.x86_64 0:2.23.2-52.el7_5.1 will be installed ---> Package libcap.x86_64 0:2.22-9.el7 will be installed ---> Package libcap-ng.x86_64 0:0.7.5-4.el7 will be installed ---> Package libdb.x86_64 0:5.3.21-24.el7 will be installed ---> Package libgcc.x86_64 0:4.8.5-28.el7_5.1 will be installed ---> Package libgomp.x86_64 0:4.8.5-28.el7_5.1 will be installed ---> Package libmount.x86_64 0:2.23.2-52.el7_5.1 will be installed ---> Package libmpc.x86_64 0:1.0.1-3.el7 will be installed ---> Package libselinux.x86_64 0:2.5-12.el7 will be installed --> Processing Dependency: libsepol(x86-64) >= 2.5-6 for package: libselinux-2.5-12.el7.x86_64 --> Processing Dependency: libsepol.so.1(LIBSEPOL_1.0)(64bit) for package: libselinux-2.5-12.el7.x86_64 --> Processing Dependency: libsepol.so.1()(64bit) for package: libselinux-2.5-12.el7.x86_64 ---> Package libsemanage.x86_64 0:2.5-11.el7 will be installed --> Processing Dependency: libustr-1.0.so.1(USTR_1.0.1)(64bit) for package: libsemanage-2.5-11.el7.x86_64 --> Processing Dependency: libustr-1.0.so.1(USTR_1.0)(64bit) for package: libsemanage-2.5-11.el7.x86_64 --> Processing Dependency: libustr-1.0.so.1()(64bit) for package: libsemanage-2.5-11.el7.x86_64 ---> Package libstdc++.x86_64 0:4.8.5-28.el7_5.1 will be installed ---> Package libstdc++-devel.x86_64 0:4.8.5-28.el7_5.1 will be installed ---> Package libuser.x86_64 0:0.60-9.el7 will be installed --> Processing Dependency: libldap-2.4.so.2()(64bit) for package: libuser-0.60-9.el7.x86_64 --> Processing Dependency: libgobject-2.0.so.0()(64bit) for package: libuser-0.60-9.el7.x86_64 --> Processing Dependency: libgmodule-2.0.so.0()(64bit) for package: libuser-0.60-9.el7.x86_64 --> Processing Dependency: libglib-2.0.so.0()(64bit) for package: libuser-0.60-9.el7.x86_64 ---> Package libutempter.x86_64 0:1.1.6-4.el7 will be installed ---> Package libuuid.x86_64 0:2.23.2-52.el7_5.1 will be installed ---> Package lua.x86_64 0:5.1.4-15.el7 will be installed ---> Package mpfr.x86_64 0:3.1.1-4.el7 will be installed ---> Package ncurses.x86_64 0:5.9-14.20130511.el7_4 will be installed ---> Package ncurses-libs.x86_64 0:5.9-14.20130511.el7_4 will be installed --> Processing Dependency: ncurses-base = 5.9-14.20130511.el7_4 for package: ncurses-libs-5.9-14.20130511.el7_4.x86_64 ---> Package nss.x86_64 0:3.36.0-7.el7_5 will be installed --> Processing Dependency: nss-util >= 3.36.0-1 for package: nss-3.36.0-7.el7_5.x86_64 --> Processing Dependency: nss-softokn(x86-64) >= 3.36.0-1 for package: nss-3.36.0-7.el7_5.x86_64 --> Processing Dependency: nspr >= 4.19.0 for package: nss-3.36.0-7.el7_5.x86_64 --> Processing Dependency: nss-system-init for package: nss-3.36.0-7.el7_5.x86_64 --> Processing Dependency: nss-pem(x86-64) for package: nss-3.36.0-7.el7_5.x86_64 --> Processing Dependency: libnssutil3.so(NSSUTIL_3.31)(64bit) for package: nss-3.36.0-7.el7_5.x86_64 --> Processing Dependency: libnssutil3.so(NSSUTIL_3.24)(64bit) for package: nss-3.36.0-7.el7_5.x86_64 --> Processing Dependency: libnssutil3.so(NSSUTIL_3.21)(64bit) for package: nss-3.36.0-7.el7_5.x86_64 --> Processing Dependency: libnssutil3.so(NSSUTIL_3.17.1)(64bit) for package: nss-3.36.0-7.el7_5.x86_64 --> Processing Dependency: libnssutil3.so(NSSUTIL_3.15)(64bit) for package: nss-3.36.0-7.el7_5.x86_64 --> Processing Dependency: libnssutil3.so(NSSUTIL_3.14)(64bit) for package: nss-3.36.0-7.el7_5.x86_64 --> Processing Dependency: libnssutil3.so(NSSUTIL_3.13)(64bit) for package: nss-3.36.0-7.el7_5.x86_64 --> Processing Dependency: libnssutil3.so(NSSUTIL_3.12.5)(64bit) for package: nss-3.36.0-7.el7_5.x86_64 --> Processing Dependency: libnssutil3.so(NSSUTIL_3.12.3)(64bit) for package: nss-3.36.0-7.el7_5.x86_64 --> Processing Dependency: libnssutil3.so(NSSUTIL_3.12)(64bit) for package: nss-3.36.0-7.el7_5.x86_64 --> Processing Dependency: libplds4.so()(64bit) for package: nss-3.36.0-7.el7_5.x86_64 --> Processing Dependency: libplc4.so()(64bit) for package: nss-3.36.0-7.el7_5.x86_64 --> Processing Dependency: libnssutil3.so()(64bit) for package: nss-3.36.0-7.el7_5.x86_64 --> Processing Dependency: libnspr4.so()(64bit) for package: nss-3.36.0-7.el7_5.x86_64 ---> Package openssl-libs.x86_64 1:1.0.2k-12.el7 will be installed --> Processing Dependency: ca-certificates >= 2008-5 for package: 1:openssl-libs-1.0.2k-12.el7.x86_64 --> Processing Dependency: libkrb5.so.3(krb5_3_MIT)(64bit) for package: 1:openssl-libs-1.0.2k-12.el7.x86_64 --> Processing Dependency: libk5crypto.so.3(k5crypto_3_MIT)(64bit) for package: 1:openssl-libs-1.0.2k-12.el7.x86_64 --> Processing Dependency: libkrb5.so.3()(64bit) for package: 1:openssl-libs-1.0.2k-12.el7.x86_64 --> Processing Dependency: libk5crypto.so.3()(64bit) for package: 1:openssl-libs-1.0.2k-12.el7.x86_64 --> Processing Dependency: libgssapi_krb5.so.2()(64bit) for package: 1:openssl-libs-1.0.2k-12.el7.x86_64 --> Processing Dependency: libcom_err.so.2()(64bit) for package: 1:openssl-libs-1.0.2k-12.el7.x86_64 ---> Package pam.x86_64 0:1.1.8-22.el7 will be installed --> Processing Dependency: libpwquality >= 0.9.9 for package: pam-1.1.8-22.el7.x86_64 --> Processing Dependency: cracklib-dicts >= 2.8 for package: pam-1.1.8-22.el7.x86_64 --> Processing Dependency: libcrack.so.2()(64bit) for package: pam-1.1.8-22.el7.x86_64 ---> Package pcre.x86_64 0:8.32-17.el7 will be installed ---> Package perl.x86_64 4:5.16.3-292.el7 will be installed --> Processing Dependency: perl-libs = 4:5.16.3-292.el7 for package: 4:perl-5.16.3-292.el7.x86_64 --> Processing Dependency: perl(Socket) >= 1.3 for package: 4:perl-5.16.3-292.el7.x86_64 --> Processing Dependency: perl(Scalar::Util) >= 1.10 for package: 4:perl-5.16.3-292.el7.x86_64 --> Processing Dependency: perl-macros for package: 4:perl-5.16.3-292.el7.x86_64 --> Processing Dependency: perl-libs for package: 4:perl-5.16.3-292.el7.x86_64 --> Processing Dependency: perl(threads::shared) for package: 4:perl-5.16.3-292.el7.x86_64 --> Processing Dependency: perl(constant) for package: 4:perl-5.16.3-292.el7.x86_64 --> Processing Dependency: perl(Time::Local) for package: 4:perl-5.16.3-292.el7.x86_64 --> Processing Dependency: perl(Time::HiRes) for package: 4:perl-5.16.3-292.el7.x86_64 --> Processing Dependency: perl(Storable) for package: 4:perl-5.16.3-292.el7.x86_64 --> Processing Dependency: perl(Socket) for package: 4:perl-5.16.3-292.el7.x86_64 --> Processing Dependency: perl(Scalar::Util) for package: 4:perl-5.16.3-292.el7.x86_64 --> Processing Dependency: perl(Pod::Simple::XHTML) for package: 4:perl-5.16.3-292.el7.x86_64 --> Processing Dependency: perl(Pod::Simple::Search) for package: 4:perl-5.16.3-292.el7.x86_64 --> Processing Dependency: perl(Filter::Util::Call) for package: 4:perl-5.16.3-292.el7.x86_64 --> Processing Dependency: perl(File::Spec::Unix) for package: 4:perl-5.16.3-292.el7.x86_64 --> Processing Dependency: perl(File::Spec::Functions) for package: 4:perl-5.16.3-292.el7.x86_64 --> Processing Dependency: perl(File::Spec) for package: 4:perl-5.16.3-292.el7.x86_64 --> Processing Dependency: perl(File::Path) for package: 4:perl-5.16.3-292.el7.x86_64 --> Processing Dependency: perl(Exporter) for package: 4:perl-5.16.3-292.el7.x86_64 --> Processing Dependency: perl(Cwd) for package: 4:perl-5.16.3-292.el7.x86_64 --> Processing Dependency: perl(Carp) for package: 4:perl-5.16.3-292.el7.x86_64 --> Processing Dependency: libperl.so()(64bit) for package: 4:perl-5.16.3-292.el7.x86_64 --> Processing Dependency: libgdbm_compat.so.4()(64bit) for package: 4:perl-5.16.3-292.el7.x86_64 --> Processing Dependency: libgdbm.so.4()(64bit) for package: 4:perl-5.16.3-292.el7.x86_64 ---> Package perl-File-Temp.noarch 0:0.23.01-3.el7 will be installed ---> Package perl-Getopt-Long.noarch 0:2.40-3.el7 will be installed --> Processing Dependency: perl(Pod::Usage) >= 1.14 for package: perl-Getopt-Long-2.40-3.el7.noarch --> Processing Dependency: perl(Text::ParseWords) for package: perl-Getopt-Long-2.40-3.el7.noarch ---> Package perl-Thread-Queue.noarch 0:3.02-2.el7 will be installed ---> Package perl-srpm-macros.noarch 0:1-8.el7 will be installed ---> Package perl-threads.x86_64 0:1.87-4.el7 will be installed ---> Package pkgconfig.x86_64 1:0.27.1-4.el7 will be installed ---> Package popt.x86_64 0:1.13-16.el7 will be installed ---> Package python-rpm-macros.noarch 0:3-22.el7 will be installed ---> Package python-srpm-macros.noarch 0:3-22.el7 will be installed ---> Package python2-rpm-macros.noarch 0:3-22.el7 will be installed ---> Package rpm.x86_64 0:4.11.3-32.el7 will be installed --> Processing Dependency: curl for package: rpm-4.11.3-32.el7.x86_64 --> Processing Dependency: /usr/bin/db_stat for package: rpm-4.11.3-32.el7.x86_64 ---> Package rpm-build-libs.x86_64 0:4.11.3-32.el7 will be installed --> Processing Dependency: /usr/bin/gpg2 for package: rpm-build-libs-4.11.3-32.el7.x86_64 ---> Package rpm-libs.x86_64 0:4.11.3-32.el7 will be installed ---> Package setup.noarch 0:2.8.71-9.el7 will be installed ---> Package systemd-libs.x86_64 0:219-57.el7_5.3 will be installed --> Processing Dependency: libgcrypt.so.11(GCRYPT_1.2)(64bit) for package: systemd-libs-219-57.el7_5.3.x86_64 --> Processing Dependency: liblz4.so.1()(64bit) for package: systemd-libs-219-57.el7_5.3.x86_64 --> Processing Dependency: libgpg-error.so.0()(64bit) for package: systemd-libs-219-57.el7_5.3.x86_64 --> Processing Dependency: libgcrypt.so.11()(64bit) for package: systemd-libs-219-57.el7_5.3.x86_64 ---> Package xz-libs.x86_64 0:5.2.2-1.el7 will be installed ---> Package zip.x86_64 0:3.0-11.el7 will be installed ---> Package zlib.x86_64 0:1.2.7-17.el7 will be installed --> Running transaction check ---> Package basesystem.noarch 0:10.0-7.el7.centos will be installed ---> Package ca-certificates.noarch 0:2018.2.22-70.0.el7_5 will be installed --> Processing Dependency: p11-kit-trust >= 0.23.5 for package: ca-certificates-2018.2.22-70.0.el7_5.noarch --> Processing Dependency: p11-kit >= 0.23.5 for package: ca-certificates-2018.2.22-70.0.el7_5.noarch ---> Package chkconfig.x86_64 0:1.7.4-1.el7 will be installed ---> Package cracklib.x86_64 0:2.9.0-11.el7 will be installed ---> Package cracklib-dicts.x86_64 0:2.9.0-11.el7 will be installed ---> Package curl.x86_64 0:7.29.0-46.el7 will be installed --> Processing Dependency: libcurl = 7.29.0-46.el7 for package: curl-7.29.0-46.el7.x86_64 --> Processing Dependency: libcurl.so.4()(64bit) for package: curl-7.29.0-46.el7.x86_64 ---> Package elfutils-libs.x86_64 0:0.170-4.el7 will be installed --> Processing Dependency: default-yama-scope for package: elfutils-libs-0.170-4.el7.x86_64 ---> Package expat.x86_64 0:2.1.0-10.el7_3 will be installed ---> Package filesystem.x86_64 0:3.2-25.el7 will be installed ---> Package gdbm.x86_64 0:1.10-8.el7 will be installed ---> Package glib2.x86_64 0:2.54.2-2.el7 will be installed --> Processing Dependency: shared-mime-info for package: glib2-2.54.2-2.el7.x86_64 --> Processing Dependency: libffi.so.6()(64bit) for package: glib2-2.54.2-2.el7.x86_64 ---> Package glibc-common.x86_64 0:2.17-222.el7 will be installed --> Processing Dependency: tzdata >= 2003a for package: glibc-common-2.17-222.el7.x86_64 ---> Package glibc-headers.x86_64 0:2.17-222.el7 will be installed --> Processing Dependency: kernel-headers >= 2.2.1 for package: glibc-headers-2.17-222.el7.x86_64 --> Processing Dependency: kernel-headers for package: glibc-headers-2.17-222.el7.x86_64 ---> Package gnupg2.x86_64 0:2.0.22-5.el7_5 will be installed --> Processing Dependency: pinentry for package: gnupg2-2.0.22-5.el7_5.x86_64 --> Processing Dependency: libassuan.so.0(LIBASSUAN_1.0)(64bit) for package: gnupg2-2.0.22-5.el7_5.x86_64 --> Processing Dependency: libpth.so.20()(64bit) for package: gnupg2-2.0.22-5.el7_5.x86_64 --> Processing Dependency: libassuan.so.0()(64bit) for package: gnupg2-2.0.22-5.el7_5.x86_64 ---> Package krb5-libs.x86_64 0:1.15.1-19.el7 will be installed --> Processing Dependency: keyutils-libs >= 1.5.8 for package: krb5-libs-1.15.1-19.el7.x86_64 --> Processing Dependency: libkeyutils.so.1(KEYUTILS_1.5)(64bit) for package: krb5-libs-1.15.1-19.el7.x86_64 --> Processing Dependency: libkeyutils.so.1(KEYUTILS_1.0)(64bit) for package: krb5-libs-1.15.1-19.el7.x86_64 --> Processing Dependency: libkeyutils.so.1(KEYUTILS_0.3)(64bit) for package: krb5-libs-1.15.1-19.el7.x86_64 --> Processing Dependency: libverto.so.1()(64bit) for package: krb5-libs-1.15.1-19.el7.x86_64 --> Processing Dependency: libkeyutils.so.1()(64bit) for package: krb5-libs-1.15.1-19.el7.x86_64 ---> Package libcom_err.x86_64 0:1.42.9-12.el7_5 will be installed ---> Package libdb-utils.x86_64 0:5.3.21-24.el7 will be installed ---> Package libgcrypt.x86_64 0:1.5.3-14.el7 will be installed ---> Package libgpg-error.x86_64 0:1.12-3.el7 will be installed ---> Package libpwquality.x86_64 0:1.2.3-5.el7 will be installed ---> Package libsepol.x86_64 0:2.5-8.1.el7 will be installed ---> Package lz4.x86_64 0:1.7.5-2.el7 will be installed ---> Package ncurses-base.noarch 0:5.9-14.20130511.el7_4 will be installed ---> Package nspr.x86_64 0:4.19.0-1.el7_5 will be installed ---> Package nss-pem.x86_64 0:1.0.3-4.el7 will be installed ---> Package nss-softokn.x86_64 0:3.36.0-5.el7_5 will be installed --> Processing Dependency: libsqlite3.so.0()(64bit) for package: nss-softokn-3.36.0-5.el7_5.x86_64 ---> Package nss-softokn-freebl.x86_64 0:3.36.0-5.el7_5 will be installed ---> Package nss-sysinit.x86_64 0:3.36.0-7.el7_5 will be installed ---> Package nss-util.x86_64 0:3.36.0-1.el7_5 will be installed ---> Package openldap.x86_64 0:2.4.44-15.el7_5 will be installed --> Processing Dependency: nss-tools for package: openldap-2.4.44-15.el7_5.x86_64 --> Processing Dependency: libsasl2.so.3()(64bit) for package: openldap-2.4.44-15.el7_5.x86_64 ---> Package perl-Carp.noarch 0:1.26-244.el7 will be installed ---> Package perl-Exporter.noarch 0:5.68-3.el7 will be installed ---> Package perl-File-Path.noarch 0:2.09-2.el7 will be installed ---> Package perl-Filter.x86_64 0:1.49-3.el7 will be installed ---> Package perl-PathTools.x86_64 0:3.40-5.el7 will be installed ---> Package perl-Pod-Simple.noarch 1:3.28-4.el7 will be installed --> Processing Dependency: perl(Pod::Escapes) >= 1.04 for package: 1:perl-Pod-Simple-3.28-4.el7.noarch --> Processing Dependency: perl(Encode) for package: 1:perl-Pod-Simple-3.28-4.el7.noarch ---> Package perl-Pod-Usage.noarch 0:1.63-3.el7 will be installed --> Processing Dependency: perl(Pod::Text) >= 3.15 for package: perl-Pod-Usage-1.63-3.el7.noarch --> Processing Dependency: perl-Pod-Perldoc for package: perl-Pod-Usage-1.63-3.el7.noarch ---> Package perl-Scalar-List-Utils.x86_64 0:1.27-248.el7 will be installed ---> Package perl-Socket.x86_64 0:2.010-4.el7 will be installed ---> Package perl-Storable.x86_64 0:2.45-3.el7 will be installed ---> Package perl-Text-ParseWords.noarch 0:3.29-4.el7 will be installed ---> Package perl-Time-HiRes.x86_64 4:1.9725-3.el7 will be installed ---> Package perl-Time-Local.noarch 0:1.2300-2.el7 will be installed ---> Package perl-constant.noarch 0:1.27-2.el7 will be installed ---> Package perl-libs.x86_64 4:5.16.3-292.el7 will be installed ---> Package perl-macros.x86_64 4:5.16.3-292.el7 will be installed ---> Package perl-threads-shared.x86_64 0:1.43-6.el7 will be installed ---> Package python-libs.x86_64 0:2.7.5-69.el7_5 will be installed ---> Package readline.x86_64 0:6.2-10.el7 will be installed ---> Package ustr.x86_64 0:1.0.4-16.el7 will be installed --> Running transaction check ---> Package cyrus-sasl-lib.x86_64 0:2.1.26-23.el7 will be installed ---> Package elfutils-default-yama-scope.noarch 0:0.170-4.el7 will be installed --> Processing Dependency: systemd for package: elfutils-default-yama-scope-0.170-4.el7.noarch --> Processing Dependency: systemd for package: elfutils-default-yama-scope-0.170-4.el7.noarch ---> Package kernel-headers.x86_64 0:3.10.0-862.14.4.el7 will be installed ---> Package keyutils-libs.x86_64 0:1.5.8-3.el7 will be installed ---> Package libassuan.x86_64 0:2.1.0-3.el7 will be installed ---> Package libcurl.x86_64 0:7.29.0-46.el7 will be installed --> Processing Dependency: libssh2(x86-64) >= 1.4.3 for package: libcurl-7.29.0-46.el7.x86_64 --> Processing Dependency: libidn.so.11(LIBIDN_1.0)(64bit) for package: libcurl-7.29.0-46.el7.x86_64 --> Processing Dependency: libssh2.so.1()(64bit) for package: libcurl-7.29.0-46.el7.x86_64 --> Processing Dependency: libidn.so.11()(64bit) for package: libcurl-7.29.0-46.el7.x86_64 ---> Package libffi.x86_64 0:3.0.13-18.el7 will be installed ---> Package libverto.x86_64 0:0.2.5-4.el7 will be installed ---> Package nss-tools.x86_64 0:3.36.0-7.el7_5 will be installed ---> Package p11-kit.x86_64 0:0.23.5-3.el7 will be installed ---> Package p11-kit-trust.x86_64 0:0.23.5-3.el7 will be installed --> Processing Dependency: libtasn1.so.6(LIBTASN1_0_3)(64bit) for package: p11-kit-trust-0.23.5-3.el7.x86_64 --> Processing Dependency: libtasn1.so.6()(64bit) for package: p11-kit-trust-0.23.5-3.el7.x86_64 ---> Package perl-Encode.x86_64 0:2.51-7.el7 will be installed ---> Package perl-Pod-Escapes.noarch 1:1.04-292.el7 will be installed ---> Package perl-Pod-Perldoc.noarch 0:3.20-4.el7 will be installed --> Processing Dependency: perl(parent) for package: perl-Pod-Perldoc-3.20-4.el7.noarch --> Processing Dependency: perl(HTTP::Tiny) for package: perl-Pod-Perldoc-3.20-4.el7.noarch --> Processing Dependency: groff-base for package: perl-Pod-Perldoc-3.20-4.el7.noarch ---> Package perl-podlators.noarch 0:2.5.1-3.el7 will be installed ---> Package pinentry.x86_64 0:0.8.1-17.el7 will be installed ---> Package pth.x86_64 0:2.0.7-23.el7 will be installed ---> Package shared-mime-info.x86_64 0:1.8-4.el7 will be installed --> Processing Dependency: libxml2.so.2(LIBXML2_2.4.30)(64bit) for package: shared-mime-info-1.8-4.el7.x86_64 --> Processing Dependency: libxml2.so.2()(64bit) for package: shared-mime-info-1.8-4.el7.x86_64 ---> Package sqlite.x86_64 0:3.7.17-8.el7 will be installed ---> Package tzdata.noarch 0:2018f-2.el7 will be installed --> Running transaction check ---> Package groff-base.x86_64 0:1.22.2-8.el7 will be installed ---> Package libidn.x86_64 0:1.28-4.el7 will be installed ---> Package libssh2.x86_64 0:1.4.3-10.el7_2.1 will be installed ---> Package libtasn1.x86_64 0:4.10-1.el7 will be installed ---> Package libxml2.x86_64 0:2.9.1-6.el7_2.3 will be installed ---> Package perl-HTTP-Tiny.noarch 0:0.033-3.el7 will be installed ---> Package perl-parent.noarch 1:0.225-244.el7 will be installed ---> Package systemd.x86_64 0:219-57.el7_5.3 will be installed --> Processing Dependency: kmod >= 18-4 for package: systemd-219-57.el7_5.3.x86_64 --> Processing Dependency: libkmod.so.2(LIBKMOD_5)(64bit) for package: systemd-219-57.el7_5.3.x86_64 --> Processing Dependency: libcryptsetup.so.4(CRYPTSETUP_1.0)(64bit) for package: systemd-219-57.el7_5.3.x86_64 --> Processing Dependency: dbus for package: systemd-219-57.el7_5.3.x86_64 --> Processing Dependency: acl for package: systemd-219-57.el7_5.3.x86_64 --> Processing Dependency: libqrencode.so.3()(64bit) for package: systemd-219-57.el7_5.3.x86_64 --> Processing Dependency: libkmod.so.2()(64bit) for package: systemd-219-57.el7_5.3.x86_64 --> Processing Dependency: libcryptsetup.so.4()(64bit) for package: systemd-219-57.el7_5.3.x86_64 --> Running transaction check ---> Package acl.x86_64 0:2.2.51-14.el7 will be installed ---> Package cryptsetup-libs.x86_64 0:1.7.4-4.el7 will be installed --> Processing Dependency: libdevmapper.so.1.02(DM_1_02_97)(64bit) for package: cryptsetup-libs-1.7.4-4.el7.x86_64 --> Processing Dependency: libdevmapper.so.1.02(Base)(64bit) for package: cryptsetup-libs-1.7.4-4.el7.x86_64 --> Processing Dependency: libdevmapper.so.1.02()(64bit) for package: cryptsetup-libs-1.7.4-4.el7.x86_64 ---> Package dbus.x86_64 1:1.10.24-7.el7 will be installed --> Processing Dependency: dbus-libs(x86-64) = 1:1.10.24-7.el7 for package: 1:dbus-1.10.24-7.el7.x86_64 --> Processing Dependency: libdbus-1.so.3(LIBDBUS_PRIVATE_1.10.24)(64bit) for package: 1:dbus-1.10.24-7.el7.x86_64 --> Processing Dependency: libdbus-1.so.3(LIBDBUS_1_3)(64bit) for package: 1:dbus-1.10.24-7.el7.x86_64 --> Processing Dependency: libdbus-1.so.3()(64bit) for package: 1:dbus-1.10.24-7.el7.x86_64 ---> Package kmod.x86_64 0:20-21.el7 will be installed --> Processing Dependency: dracut for package: kmod-20-21.el7.x86_64 ---> Package kmod-libs.x86_64 0:20-21.el7 will be installed ---> Package qrencode-libs.x86_64 0:3.4.1-3.el7 will be installed --> Running transaction check ---> Package dbus-libs.x86_64 1:1.10.24-7.el7 will be installed ---> Package device-mapper-libs.x86_64 7:1.02.146-4.el7 will be installed --> Processing Dependency: device-mapper = 7:1.02.146-4.el7 for package: 7:device-mapper-libs-1.02.146-4.el7.x86_64 ---> Package dracut.x86_64 0:033-535.el7_5.1 will be installed --> Processing Dependency: procps-ng for package: dracut-033-535.el7_5.1.x86_64 --> Processing Dependency: kpartx for package: dracut-033-535.el7_5.1.x86_64 --> Processing Dependency: hardlink for package: dracut-033-535.el7_5.1.x86_64 --> Running transaction check ---> Package device-mapper.x86_64 7:1.02.146-4.el7 will be installed ---> Package hardlink.x86_64 1:1.0-19.el7 will be installed ---> Package kpartx.x86_64 0:0.4.9-119.el7_5.1 will be installed ---> Package procps-ng.x86_64 0:3.3.10-17.el7_5.2 will be installed --> Finished Dependency Resolution Dependencies Resolved ================================================================================ Package Arch Version Repository Size ================================================================================ Installing for group install "Buildsystem building group": bash x86_64 4.2.46-30.el7 base 1.0 M bzip2 x86_64 1.0.6-13.el7 base 52 k coreutils x86_64 8.22-21.el7 base 3.3 M cpio x86_64 2.11-27.el7 base 211 k diffutils x86_64 3.3-4.el7 base 322 k epel-release noarch 7-11 epel 15 k epel-rpm-macros noarch 7-19 epel 13 k findutils x86_64 1:4.5.11-5.el7 base 559 k gawk x86_64 4.0.2-4.el7_3.1 base 874 k gcc x86_64 4.8.5-28.el7_5.1 updates 16 M gcc-c++ x86_64 4.8.5-28.el7_5.1 updates 7.2 M grep x86_64 2.20-3.el7 base 344 k gzip x86_64 1.5-10.el7 base 130 k info x86_64 5.1-5.el7 base 233 k make x86_64 1:3.82-23.el7 base 420 k patch x86_64 2.7.1-10.el7_5 updates 110 k redhat-rpm-config noarch 9.1.0-80.el7.centos base 79 k rpm-build x86_64 4.11.3-32.el7 base 147 k sed x86_64 4.2.2-5.el7 base 231 k shadow-utils x86_64 2:4.1.5.1-24.el7 base 1.1 M tar x86_64 2:1.26-34.el7 base 845 k unzip x86_64 6.0-19.el7 base 170 k util-linux x86_64 2.23.2-52.el7_5.1 updates 2.0 M which x86_64 2.20-7.el7 base 41 k xz x86_64 5.2.2-1.el7 base 229 k Installing for dependencies: acl x86_64 2.2.51-14.el7 base 81 k audit-libs x86_64 2.8.1-3.el7_5.1 updates 99 k basesystem noarch 10.0-7.el7.centos base 5.0 k binutils x86_64 2.27-28.base.el7_5.1 updates 5.9 M bzip2-libs x86_64 1.0.6-13.el7 base 40 k ca-certificates noarch 2018.2.22-70.0.el7_5 updates 392 k centos-release x86_64 7-5.1804.5.el7.centos updates 25 k chkconfig x86_64 1.7.4-1.el7 base 181 k cpp x86_64 4.8.5-28.el7_5.1 updates 5.9 M cracklib x86_64 2.9.0-11.el7 base 80 k cracklib-dicts x86_64 2.9.0-11.el7 base 3.6 M cryptsetup-libs x86_64 1.7.4-4.el7 base 223 k curl x86_64 7.29.0-46.el7 base 268 k cyrus-sasl-lib x86_64 2.1.26-23.el7 base 155 k dbus x86_64 1:1.10.24-7.el7 base 245 k dbus-libs x86_64 1:1.10.24-7.el7 base 169 k device-mapper x86_64 7:1.02.146-4.el7 base 289 k device-mapper-libs x86_64 7:1.02.146-4.el7 base 316 k dracut x86_64 033-535.el7_5.1 updates 325 k dwz x86_64 0.11-3.el7 base 99 k elfutils x86_64 0.170-4.el7 base 282 k elfutils-default-yama-scope noarch 0.170-4.el7 base 31 k elfutils-libelf x86_64 0.170-4.el7 base 195 k elfutils-libs x86_64 0.170-4.el7 base 267 k expat x86_64 2.1.0-10.el7_3 base 81 k file x86_64 5.11-33.el7 base 57 k file-libs x86_64 5.11-33.el7 base 340 k filesystem x86_64 3.2-25.el7 base 1.0 M gdb x86_64 7.6.1-110.el7 base 2.4 M gdbm x86_64 1.10-8.el7 base 70 k glib2 x86_64 2.54.2-2.el7 base 2.4 M glibc x86_64 2.17-222.el7 base 3.6 M glibc-common x86_64 2.17-222.el7 base 11 M glibc-devel x86_64 2.17-222.el7 base 1.1 M glibc-headers x86_64 2.17-222.el7 base 678 k gmp x86_64 1:6.0.0-15.el7 base 281 k gnupg2 x86_64 2.0.22-5.el7_5 updates 1.5 M groff-base x86_64 1.22.2-8.el7 base 942 k hardlink x86_64 1:1.0-19.el7 base 14 k kernel-headers x86_64 3.10.0-862.14.4.el7 updates 7.1 M keyutils-libs x86_64 1.5.8-3.el7 base 25 k kmod x86_64 20-21.el7 base 121 k kmod-libs x86_64 20-21.el7 base 50 k kpartx x86_64 0.4.9-119.el7_5.1 updates 76 k krb5-libs x86_64 1.15.1-19.el7 updates 747 k libacl x86_64 2.2.51-14.el7 base 27 k libassuan x86_64 2.1.0-3.el7 base 63 k libattr x86_64 2.4.46-13.el7 base 18 k libblkid x86_64 2.23.2-52.el7_5.1 updates 178 k libcap x86_64 2.22-9.el7 base 47 k libcap-ng x86_64 0.7.5-4.el7 base 25 k libcom_err x86_64 1.42.9-12.el7_5 updates 41 k libcurl x86_64 7.29.0-46.el7 base 220 k libdb x86_64 5.3.21-24.el7 base 720 k libdb-utils x86_64 5.3.21-24.el7 base 132 k libffi x86_64 3.0.13-18.el7 base 30 k libgcc x86_64 4.8.5-28.el7_5.1 updates 101 k libgcrypt x86_64 1.5.3-14.el7 base 263 k libgomp x86_64 4.8.5-28.el7_5.1 updates 156 k libgpg-error x86_64 1.12-3.el7 base 87 k libidn x86_64 1.28-4.el7 base 209 k libmount x86_64 2.23.2-52.el7_5.1 updates 180 k libmpc x86_64 1.0.1-3.el7 base 51 k libpwquality x86_64 1.2.3-5.el7 base 85 k libselinux x86_64 2.5-12.el7 base 162 k libsemanage x86_64 2.5-11.el7 base 150 k libsepol x86_64 2.5-8.1.el7 base 297 k libssh2 x86_64 1.4.3-10.el7_2.1 base 134 k libstdc++ x86_64 4.8.5-28.el7_5.1 updates 303 k libstdc++-devel x86_64 4.8.5-28.el7_5.1 updates 1.5 M libtasn1 x86_64 4.10-1.el7 base 320 k libuser x86_64 0.60-9.el7 base 400 k libutempter x86_64 1.1.6-4.el7 base 25 k libuuid x86_64 2.23.2-52.el7_5.1 updates 81 k libverto x86_64 0.2.5-4.el7 base 16 k libxml2 x86_64 2.9.1-6.el7_2.3 base 668 k lua x86_64 5.1.4-15.el7 base 201 k lz4 x86_64 1.7.5-2.el7 base 98 k mpfr x86_64 3.1.1-4.el7 base 203 k ncurses x86_64 5.9-14.20130511.el7_4 base 304 k ncurses-base noarch 5.9-14.20130511.el7_4 base 68 k ncurses-libs x86_64 5.9-14.20130511.el7_4 base 316 k nspr x86_64 4.19.0-1.el7_5 updates 127 k nss x86_64 3.36.0-7.el7_5 updates 835 k nss-pem x86_64 1.0.3-4.el7 base 73 k nss-softokn x86_64 3.36.0-5.el7_5 updates 315 k nss-softokn-freebl x86_64 3.36.0-5.el7_5 updates 222 k nss-sysinit x86_64 3.36.0-7.el7_5 updates 62 k nss-tools x86_64 3.36.0-7.el7_5 updates 515 k nss-util x86_64 3.36.0-1.el7_5 updates 78 k openldap x86_64 2.4.44-15.el7_5 updates 355 k openssl-libs x86_64 1:1.0.2k-12.el7 base 1.2 M p11-kit x86_64 0.23.5-3.el7 base 252 k p11-kit-trust x86_64 0.23.5-3.el7 base 129 k pam x86_64 1.1.8-22.el7 base 720 k pcre x86_64 8.32-17.el7 base 422 k perl x86_64 4:5.16.3-292.el7 base 8.0 M perl-Carp noarch 1.26-244.el7 base 19 k perl-Encode x86_64 2.51-7.el7 base 1.5 M perl-Exporter noarch 5.68-3.el7 base 28 k perl-File-Path noarch 2.09-2.el7 base 26 k perl-File-Temp noarch 0.23.01-3.el7 base 56 k perl-Filter x86_64 1.49-3.el7 base 76 k perl-Getopt-Long noarch 2.40-3.el7 base 56 k perl-HTTP-Tiny noarch 0.033-3.el7 base 38 k perl-PathTools x86_64 3.40-5.el7 base 82 k perl-Pod-Escapes noarch 1:1.04-292.el7 base 51 k perl-Pod-Perldoc noarch 3.20-4.el7 base 87 k perl-Pod-Simple noarch 1:3.28-4.el7 base 216 k perl-Pod-Usage noarch 1.63-3.el7 base 27 k perl-Scalar-List-Utils x86_64 1.27-248.el7 base 36 k perl-Socket x86_64 2.010-4.el7 base 49 k perl-Storable x86_64 2.45-3.el7 base 77 k perl-Text-ParseWords noarch 3.29-4.el7 base 14 k perl-Thread-Queue noarch 3.02-2.el7 base 17 k perl-Time-HiRes x86_64 4:1.9725-3.el7 base 45 k perl-Time-Local noarch 1.2300-2.el7 base 24 k perl-constant noarch 1.27-2.el7 base 19 k perl-libs x86_64 4:5.16.3-292.el7 base 688 k perl-macros x86_64 4:5.16.3-292.el7 base 43 k perl-parent noarch 1:0.225-244.el7 base 12 k perl-podlators noarch 2.5.1-3.el7 base 112 k perl-srpm-macros noarch 1-8.el7 base 4.6 k perl-threads x86_64 1.87-4.el7 base 49 k perl-threads-shared x86_64 1.43-6.el7 base 39 k pinentry x86_64 0.8.1-17.el7 base 73 k pkgconfig x86_64 1:0.27.1-4.el7 base 54 k popt x86_64 1.13-16.el7 base 42 k procps-ng x86_64 3.3.10-17.el7_5.2 updates 290 k pth x86_64 2.0.7-23.el7 base 89 k python-libs x86_64 2.7.5-69.el7_5 updates 5.6 M python-rpm-macros noarch 3-22.el7 epel 7.5 k python-srpm-macros noarch 3-22.el7 epel 7.0 k python2-rpm-macros noarch 3-22.el7 epel 6.3 k qrencode-libs x86_64 3.4.1-3.el7 base 50 k readline x86_64 6.2-10.el7 base 193 k rpm x86_64 4.11.3-32.el7 base 1.2 M rpm-build-libs x86_64 4.11.3-32.el7 base 105 k rpm-libs x86_64 4.11.3-32.el7 base 276 k setup noarch 2.8.71-9.el7 base 166 k shared-mime-info x86_64 1.8-4.el7 base 312 k sqlite x86_64 3.7.17-8.el7 base 393 k systemd x86_64 219-57.el7_5.3 updates 5.0 M systemd-libs x86_64 219-57.el7_5.3 updates 402 k tzdata noarch 2018f-2.el7 updates 484 k ustr x86_64 1.0.4-16.el7 base 92 k xz-libs x86_64 5.2.2-1.el7 base 103 k zip x86_64 3.0-11.el7 base 260 k zlib x86_64 1.2.7-17.el7 base 90 k Transaction Summary ================================================================================ Install 25 Packages (+149 Dependent packages) Total download size: 128 M Installed size: 460 M Downloading packages: warning: /var/lib/mock/829473-epel-7-x86_64-1543211100.717137/root/var/cache/yum/updates/packages/audit-libs-2.8.1-3.el7_5.1.x86_64.rpm: Header V3 RSA/SHA256 Signature, key ID f4a80eb5: NOKEY Public key for audit-libs-2.8.1-3.el7_5.1.x86_64.rpm is not installed (1/174): audit-libs-2.8.1-3.el7_5.1.x86_64.rpm | 99 kB 00:00 Public key for basesystem-10.0-7.el7.centos.noarch.rpm is not installed (2/174): basesystem-10.0-7.el7.centos.noarch.rpm | 5.0 kB 00:00 (3/174): acl-2.2.51-14.el7.x86_64.rpm | 81 kB 00:00 (4/174): bzip2-1.0.6-13.el7.x86_64.rpm | 52 kB 00:00 (5/174): bzip2-libs-1.0.6-13.el7.x86_64.rpm | 40 kB 00:00 (6/174): binutils-2.27-28.base.el7_5.1.x86_64.rpm | 5.9 MB 00:00 (7/174): centos-release-7-5.1804.5.el7.centos.x86_64.rpm | 25 kB 00:00 (8/174): ca-certificates-2018.2.22-70.0.el7_5.noarch.rpm | 392 kB 00:00 (9/174): chkconfig-1.7.4-1.el7.x86_64.rpm | 181 kB 00:00 (10/174): bash-4.2.46-30.el7.x86_64.rpm | 1.0 MB 00:00 (11/174): cpio-2.11-27.el7.x86_64.rpm | 211 kB 00:00 (12/174): cracklib-2.9.0-11.el7.x86_64.rpm | 80 kB 00:00 (13/174): cpp-4.8.5-28.el7_5.1.x86_64.rpm | 5.9 MB 00:00 (14/174): coreutils-8.22-21.el7.x86_64.rpm | 3.3 MB 00:00 (15/174): cryptsetup-libs-1.7.4-4.el7.x86_64.rpm | 223 kB 00:00 (16/174): cracklib-dicts-2.9.0-11.el7.x86_64.rpm | 3.6 MB 00:00 (17/174): curl-7.29.0-46.el7.x86_64.rpm | 268 kB 00:00 (18/174): cyrus-sasl-lib-2.1.26-23.el7.x86_64.rpm | 155 kB 00:00 (19/174): dbus-1.10.24-7.el7.x86_64.rpm | 245 kB 00:00 (20/174): dbus-libs-1.10.24-7.el7.x86_64.rpm | 169 kB 00:00 (21/174): device-mapper-1.02.146-4.el7.x86_64.rpm | 289 kB 00:00 (22/174): dracut-033-535.el7_5.1.x86_64.rpm | 325 kB 00:00 (23/174): device-mapper-libs-1.02.146-4.el7.x86_64.rpm | 316 kB 00:00 (24/174): diffutils-3.3-4.el7.x86_64.rpm | 322 kB 00:00 (25/174): dwz-0.11-3.el7.x86_64.rpm | 99 kB 00:00 (26/174): elfutils-0.170-4.el7.x86_64.rpm | 282 kB 00:00 (27/174): elfutils-default-yama-scope-0.170-4.el7.noarch.rp | 31 kB 00:00 (28/174): elfutils-libelf-0.170-4.el7.x86_64.rpm | 195 kB 00:00 (29/174): elfutils-libs-0.170-4.el7.x86_64.rpm | 267 kB 00:00 warning: /var/lib/mock/829473-epel-7-x86_64-1543211100.717137/root/var/cache/yum/epel/packages/epel-release-7-11.noarch.rpm: Header V3 RSA/SHA256 Signature, key ID 352c64e5: NOKEY Public key for epel-release-7-11.noarch.rpm is not installed (30/174): epel-release-7-11.noarch.rpm | 15 kB 00:00 (31/174): epel-rpm-macros-7-19.noarch.rpm | 13 kB 00:00 (32/174): expat-2.1.0-10.el7_3.x86_64.rpm | 81 kB 00:00 (33/174): file-5.11-33.el7.x86_64.rpm | 57 kB 00:00 (34/174): file-libs-5.11-33.el7.x86_64.rpm | 340 kB 00:00 (35/174): filesystem-3.2-25.el7.x86_64.rpm | 1.0 MB 00:00 (36/174): gawk-4.0.2-4.el7_3.1.x86_64.rpm | 874 kB 00:00 (37/174): findutils-4.5.11-5.el7.x86_64.rpm | 559 kB 00:01 (38/174): gcc-c++-4.8.5-28.el7_5.1.x86_64.rpm | 7.2 MB 00:00 (39/174): gdbm-1.10-8.el7.x86_64.rpm | 70 kB 00:00 (40/174): gdb-7.6.1-110.el7.x86_64.rpm | 2.4 MB 00:00 (41/174): gcc-4.8.5-28.el7_5.1.x86_64.rpm | 16 MB 00:00 (42/174): glib2-2.54.2-2.el7.x86_64.rpm | 2.4 MB 00:00 (43/174): glibc-2.17-222.el7.x86_64.rpm | 3.6 MB 00:00 (44/174): glibc-devel-2.17-222.el7.x86_64.rpm | 1.1 MB 00:00 (45/174): glibc-headers-2.17-222.el7.x86_64.rpm | 678 kB 00:00 (46/174): gmp-6.0.0-15.el7.x86_64.rpm | 281 kB 00:00 (47/174): gnupg2-2.0.22-5.el7_5.x86_64.rpm | 1.5 MB 00:00 (48/174): grep-2.20-3.el7.x86_64.rpm | 344 kB 00:00 (49/174): groff-base-1.22.2-8.el7.x86_64.rpm | 942 kB 00:00 (50/174): gzip-1.5-10.el7.x86_64.rpm | 130 kB 00:00 (51/174): hardlink-1.0-19.el7.x86_64.rpm | 14 kB 00:00 (52/174): info-5.1-5.el7.x86_64.rpm | 233 kB 00:00 (53/174): keyutils-libs-1.5.8-3.el7.x86_64.rpm | 25 kB 00:00 (54/174): kmod-20-21.el7.x86_64.rpm | 121 kB 00:00 (55/174): kmod-libs-20-21.el7.x86_64.rpm | 50 kB 00:00 (56/174): kernel-headers-3.10.0-862.14.4.el7.x86_64.rpm | 7.1 MB 00:00 (57/174): krb5-libs-1.15.1-19.el7.x86_64.rpm | 747 kB 00:00 (58/174): kpartx-0.4.9-119.el7_5.1.x86_64.rpm | 76 kB 00:00 (59/174): libacl-2.2.51-14.el7.x86_64.rpm | 27 kB 00:00 (60/174): libassuan-2.1.0-3.el7.x86_64.rpm | 63 kB 00:00 (61/174): libblkid-2.23.2-52.el7_5.1.x86_64.rpm | 178 kB 00:00 (62/174): libattr-2.4.46-13.el7.x86_64.rpm | 18 kB 00:00 (63/174): libcap-2.22-9.el7.x86_64.rpm | 47 kB 00:00 (64/174): libcom_err-1.42.9-12.el7_5.x86_64.rpm | 41 kB 00:00 (65/174): libcap-ng-0.7.5-4.el7.x86_64.rpm | 25 kB 00:00 (66/174): libcurl-7.29.0-46.el7.x86_64.rpm | 220 kB 00:00 (67/174): libdb-5.3.21-24.el7.x86_64.rpm | 720 kB 00:00 (68/174): glibc-common-2.17-222.el7.x86_64.rpm | 11 MB 00:02 (69/174): libdb-utils-5.3.21-24.el7.x86_64.rpm | 132 kB 00:00 (70/174): libgcc-4.8.5-28.el7_5.1.x86_64.rpm | 101 kB 00:00 (71/174): libffi-3.0.13-18.el7.x86_64.rpm | 30 kB 00:00 (72/174): libgcrypt-1.5.3-14.el7.x86_64.rpm | 263 kB 00:00 (73/174): libmount-2.23.2-52.el7_5.1.x86_64.rpm | 180 kB 00:00 (74/174): libgpg-error-1.12-3.el7.x86_64.rpm | 87 kB 00:00 (75/174): libidn-1.28-4.el7.x86_64.rpm | 209 kB 00:00 (76/174): libmpc-1.0.1-3.el7.x86_64.rpm | 51 kB 00:00 (77/174): libgomp-4.8.5-28.el7_5.1.x86_64.rpm | 156 kB 00:00 (78/174): libpwquality-1.2.3-5.el7.x86_64.rpm | 85 kB 00:00 (79/174): libselinux-2.5-12.el7.x86_64.rpm | 162 kB 00:00 (80/174): libsemanage-2.5-11.el7.x86_64.rpm | 150 kB 00:00 (81/174): libstdc++-4.8.5-28.el7_5.1.x86_64.rpm | 303 kB 00:00 (82/174): libsepol-2.5-8.1.el7.x86_64.rpm | 297 kB 00:00 (83/174): libssh2-1.4.3-10.el7_2.1.x86_64.rpm | 134 kB 00:00 (84/174): libtasn1-4.10-1.el7.x86_64.rpm | 320 kB 00:00 (85/174): libuuid-2.23.2-52.el7_5.1.x86_64.rpm | 81 kB 00:00 (86/174): libuser-0.60-9.el7.x86_64.rpm | 400 kB 00:00 (87/174): libutempter-1.1.6-4.el7.x86_64.rpm | 25 kB 00:00 (88/174): libverto-0.2.5-4.el7.x86_64.rpm | 16 kB 00:00 (89/174): libstdc++-devel-4.8.5-28.el7_5.1.x86_64.rpm | 1.5 MB 00:00 (90/174): lua-5.1.4-15.el7.x86_64.rpm | 201 kB 00:00 (91/174): libxml2-2.9.1-6.el7_2.3.x86_64.rpm | 668 kB 00:00 (92/174): lz4-1.7.5-2.el7.x86_64.rpm | 98 kB 00:00 (93/174): mpfr-3.1.1-4.el7.x86_64.rpm | 203 kB 00:00 (94/174): make-3.82-23.el7.x86_64.rpm | 420 kB 00:00 (95/174): ncurses-5.9-14.20130511.el7_4.x86_64.rpm | 304 kB 00:00 (96/174): ncurses-base-5.9-14.20130511.el7_4.noarch.rpm | 68 kB 00:00 (97/174): nspr-4.19.0-1.el7_5.x86_64.rpm | 127 kB 00:00 (98/174): nss-softokn-3.36.0-5.el7_5.x86_64.rpm | 315 kB 00:00 (99/174): nss-softokn-freebl-3.36.0-5.el7_5.x86_64.rpm | 222 kB 00:00 (100/174): nss-pem-1.0.3-4.el7.x86_64.rpm | 73 kB 00:00 (101/174): ncurses-libs-5.9-14.20130511.el7_4.x86_64.rpm | 316 kB 00:00 (102/174): nss-sysinit-3.36.0-7.el7_5.x86_64.rpm | 62 kB 00:00 (103/174): nss-tools-3.36.0-7.el7_5.x86_64.rpm | 515 kB 00:00 (104/174): nss-util-3.36.0-1.el7_5.x86_64.rpm | 78 kB 00:00 (105/174): openldap-2.4.44-15.el7_5.x86_64.rpm | 355 kB 00:00 (106/174): nss-3.36.0-7.el7_5.x86_64.rpm | 835 kB 00:00 (107/174): openssl-libs-1.0.2k-12.el7.x86_64.rpm | 1.2 MB 00:00 (108/174): p11-kit-trust-0.23.5-3.el7.x86_64.rpm | 129 kB 00:00 (109/174): patch-2.7.1-10.el7_5.x86_64.rpm | 110 kB 00:00 (110/174): p11-kit-0.23.5-3.el7.x86_64.rpm | 252 kB 00:00 (111/174): pam-1.1.8-22.el7.x86_64.rpm | 720 kB 00:00 (112/174): pcre-8.32-17.el7.x86_64.rpm | 422 kB 00:00 (113/174): perl-Carp-1.26-244.el7.noarch.rpm | 19 kB 00:00 (114/174): perl-Encode-2.51-7.el7.x86_64.rpm | 1.5 MB 00:00 (115/174): perl-Exporter-5.68-3.el7.noarch.rpm | 28 kB 00:00 (116/174): perl-File-Path-2.09-2.el7.noarch.rpm | 26 kB 00:00 (117/174): perl-File-Temp-0.23.01-3.el7.noarch.rpm | 56 kB 00:00 (118/174): perl-Filter-1.49-3.el7.x86_64.rpm | 76 kB 00:00 (119/174): perl-Getopt-Long-2.40-3.el7.noarch.rpm | 56 kB 00:00 (120/174): perl-HTTP-Tiny-0.033-3.el7.noarch.rpm | 38 kB 00:00 (121/174): perl-PathTools-3.40-5.el7.x86_64.rpm | 82 kB 00:00 (122/174): perl-Pod-Escapes-1.04-292.el7.noarch.rpm | 51 kB 00:00 (123/174): perl-5.16.3-292.el7.x86_64.rpm | 8.0 MB 00:01 (124/174): perl-Pod-Perldoc-3.20-4.el7.noarch.rpm | 87 kB 00:00 (125/174): perl-Pod-Usage-1.63-3.el7.noarch.rpm | 27 kB 00:00 (126/174): perl-Pod-Simple-3.28-4.el7.noarch.rpm | 216 kB 00:00 (127/174): perl-Scalar-List-Utils-1.27-248.el7.x86_64.rpm | 36 kB 00:00 (128/174): perl-Storable-2.45-3.el7.x86_64.rpm | 77 kB 00:00 (129/174): perl-Text-ParseWords-3.29-4.el7.noarch.rpm | 14 kB 00:00 (130/174): perl-Thread-Queue-3.02-2.el7.noarch.rpm | 17 kB 00:00 (131/174): perl-Time-HiRes-1.9725-3.el7.x86_64.rpm | 45 kB 00:00 (132/174): perl-Socket-2.010-4.el7.x86_64.rpm | 49 kB 00:00 (133/174): perl-Time-Local-1.2300-2.el7.noarch.rpm | 24 kB 00:00 (134/174): perl-constant-1.27-2.el7.noarch.rpm | 19 kB 00:00 (135/174): perl-macros-5.16.3-292.el7.x86_64.rpm | 43 kB 00:00 (136/174): perl-libs-5.16.3-292.el7.x86_64.rpm | 688 kB 00:00 (137/174): perl-parent-0.225-244.el7.noarch.rpm | 12 kB 00:00 (138/174): perl-podlators-2.5.1-3.el7.noarch.rpm | 112 kB 00:00 (139/174): perl-srpm-macros-1-8.el7.noarch.rpm | 4.6 kB 00:00 (140/174): perl-threads-1.87-4.el7.x86_64.rpm | 49 kB 00:00 (141/174): perl-threads-shared-1.43-6.el7.x86_64.rpm | 39 kB 00:00 (142/174): pinentry-0.8.1-17.el7.x86_64.rpm | 73 kB 00:00 (143/174): pkgconfig-0.27.1-4.el7.x86_64.rpm | 54 kB 00:00 (144/174): python-rpm-macros-3-22.el7.noarch.rpm | 7.5 kB 00:00 (145/174): python-srpm-macros-3-22.el7.noarch.rpm | 7.0 kB 00:00 (146/174): python2-rpm-macros-3-22.el7.noarch.rpm | 6.3 kB 00:00 (147/174): popt-1.13-16.el7.x86_64.rpm | 42 kB 00:00 (148/174): pth-2.0.7-23.el7.x86_64.rpm | 89 kB 00:00 (149/174): procps-ng-3.3.10-17.el7_5.2.x86_64.rpm | 290 kB 00:00 (150/174): qrencode-libs-3.4.1-3.el7.x86_64.rpm | 50 kB 00:00 (151/174): redhat-rpm-config-9.1.0-80.el7.centos.noarch.rpm | 79 kB 00:00 (152/174): readline-6.2-10.el7.x86_64.rpm | 193 kB 00:00 (153/174): rpm-build-4.11.3-32.el7.x86_64.rpm | 147 kB 00:00 (154/174): python-libs-2.7.5-69.el7_5.x86_64.rpm | 5.6 MB 00:00 (155/174): rpm-build-libs-4.11.3-32.el7.x86_64.rpm | 105 kB 00:00 (156/174): rpm-4.11.3-32.el7.x86_64.rpm | 1.2 MB 00:00 (157/174): sed-4.2.2-5.el7.x86_64.rpm | 231 kB 00:00 (158/174): rpm-libs-4.11.3-32.el7.x86_64.rpm | 276 kB 00:00 (159/174): setup-2.8.71-9.el7.noarch.rpm | 166 kB 00:00 (160/174): shared-mime-info-1.8-4.el7.x86_64.rpm | 312 kB 00:00 (161/174): sqlite-3.7.17-8.el7.x86_64.rpm | 393 kB 00:00 (162/174): systemd-219-57.el7_5.3.x86_64.rpm | 5.0 MB 00:00 (163/174): tzdata-2018f-2.el7.noarch.rpm | 484 kB 00:00 (164/174): shadow-utils-4.1.5.1-24.el7.x86_64.rpm | 1.1 MB 00:00 (165/174): systemd-libs-219-57.el7_5.3.x86_64.rpm | 402 kB 00:00 (166/174): tar-1.26-34.el7.x86_64.rpm | 845 kB 00:00 (167/174): unzip-6.0-19.el7.x86_64.rpm | 170 kB 00:00 (168/174): util-linux-2.23.2-52.el7_5.1.x86_64.rpm | 2.0 MB 00:00 (169/174): ustr-1.0.4-16.el7.x86_64.rpm | 92 kB 00:00 (170/174): which-2.20-7.el7.x86_64.rpm | 41 kB 00:00 (171/174): xz-5.2.2-1.el7.x86_64.rpm | 229 kB 00:00 (172/174): xz-libs-5.2.2-1.el7.x86_64.rpm | 103 kB 00:00 (173/174): zip-3.0-11.el7.x86_64.rpm | 260 kB 00:00 (174/174): zlib-1.2.7-17.el7.x86_64.rpm | 90 kB 00:00 -------------------------------------------------------------------------------- Total 10 MB/s | 128 MB 00:12 Retrieving key from file:///usr/share/distribution-gpg-keys/centos/RPM-GPG-KEY-CentOS-7 Importing GPG key 0xF4A80EB5: Userid : "CentOS-7 Key (CentOS 7 Official Signing Key) " Fingerprint: 6341 ab27 53d7 8a78 a7c2 7bb1 24c6 a8a7 f4a8 0eb5 From : /usr/share/distribution-gpg-keys/centos/RPM-GPG-KEY-CentOS-7 Retrieving key from file:///usr/share/distribution-gpg-keys/epel/RPM-GPG-KEY-EPEL-7 Importing GPG key 0x352C64E5: Userid : "Fedora EPEL (7) " Fingerprint: 91e9 7d7c 4a5e 96f1 7f3e 888f 6a2f aea2 352c 64e5 From : /usr/share/distribution-gpg-keys/epel/RPM-GPG-KEY-EPEL-7 Running transaction check Running transaction test Transaction test succeeded Running transaction Installing : libgcc-4.8.5-28.el7_5.1.x86_64 1/174 Installing : python-srpm-macros-3-22.el7.noarch 2/174 Installing : python-rpm-macros-3-22.el7.noarch 3/174 Installing : python2-rpm-macros-3-22.el7.noarch 4/174 Installing : tzdata-2018f-2.el7.noarch 5/174 Installing : ncurses-base-5.9-14.20130511.el7_4.noarch 6/174 Installing : chkconfig-1.7.4-1.el7.x86_64 7/174 Installing : glibc-common-2.17-222.el7.x86_64 8/174 Installing : nss-softokn-freebl-3.36.0-5.el7_5.x86_64 9/174 Installing : bash-4.2.46-30.el7.x86_64 10/174 Installing : ncurses-5.9-14.20130511.el7_4.x86_64 11/174 Installing : setup-2.8.71-9.el7.noarch 12/174 warning: /etc/hosts created as /etc/hosts.rpmnew Installing : filesystem-3.2-25.el7.x86_64 13/174 Installing : basesystem-10.0-7.el7.centos.noarch 14/174 Installing : glibc-2.17-222.el7.x86_64 15/174 Installing : zlib-1.2.7-17.el7.x86_64 16/174 Installing : nspr-4.19.0-1.el7_5.x86_64 17/174 Installing : nss-util-3.36.0-1.el7_5.x86_64 18/174 Installing : libstdc++-4.8.5-28.el7_5.1.x86_64 19/174 Installing : ncurses-libs-5.9-14.20130511.el7_4.x86_64 20/174 Installing : info-5.1-5.el7.x86_64 21/174 Installing : 1:gmp-6.0.0-15.el7.x86_64 22/174 Installing : popt-1.13-16.el7.x86_64 23/174 Installing : libattr-2.4.46-13.el7.x86_64 24/174 Installing : libacl-2.2.51-14.el7.x86_64 25/174 Installing : libcap-2.22-9.el7.x86_64 26/174 Installing : libcom_err-1.42.9-12.el7_5.x86_64 27/174 Installing : libffi-3.0.13-18.el7.x86_64 28/174 Installing : libsepol-2.5-8.1.el7.x86_64 29/174 Installing : gawk-4.0.2-4.el7_3.1.x86_64 30/174 Installing : pcre-8.32-17.el7.x86_64 31/174 Installing : libselinux-2.5-12.el7.x86_64 32/174 Installing : sed-4.2.2-5.el7.x86_64 33/174 Installing : grep-2.20-3.el7.x86_64 34/174 Installing : p11-kit-0.23.5-3.el7.x86_64 35/174 Installing : libverto-0.2.5-4.el7.x86_64 36/174 Installing : libtasn1-4.10-1.el7.x86_64 37/174 Installing : p11-kit-trust-0.23.5-3.el7.x86_64 38/174 Installing : ca-certificates-2018.2.22-70.0.el7_5.noarch 39/174 Installing : keyutils-libs-1.5.8-3.el7.x86_64 40/174 Installing : centos-release-7-5.1804.5.el7.centos.x86_64 41/174 Installing : coreutils-8.22-21.el7.x86_64 42/174 Installing : 1:openssl-libs-1.0.2k-12.el7.x86_64 43/174 Installing : krb5-libs-1.15.1-19.el7.x86_64 44/174 Installing : bzip2-libs-1.0.6-13.el7.x86_64 45/174 Installing : xz-libs-5.2.2-1.el7.x86_64 46/174 Installing : elfutils-libelf-0.170-4.el7.x86_64 47/174 Installing : libdb-5.3.21-24.el7.x86_64 48/174 Installing : readline-6.2-10.el7.x86_64 49/174 Installing : libgpg-error-1.12-3.el7.x86_64 50/174 Installing : libgcrypt-1.5.3-14.el7.x86_64 51/174 Installing : lua-5.1.4-15.el7.x86_64 52/174 Installing : gzip-1.5-10.el7.x86_64 53/174 Installing : mpfr-3.1.1-4.el7.x86_64 54/174 Installing : libuuid-2.23.2-52.el7_5.1.x86_64 55/174 Installing : libblkid-2.23.2-52.el7_5.1.x86_64 56/174 Installing : libmount-2.23.2-52.el7_5.1.x86_64 57/174 Installing : libmpc-1.0.1-3.el7.x86_64 58/174 Installing : cracklib-2.9.0-11.el7.x86_64 59/174 Installing : xz-5.2.2-1.el7.x86_64 60/174 Installing : binutils-2.27-28.base.el7_5.1.x86_64 61/174 Installing : 1:findutils-4.5.11-5.el7.x86_64 62/174 Installing : cpio-2.11-27.el7.x86_64 63/174 Installing : diffutils-3.3-4.el7.x86_64 64/174 Installing : file-libs-5.11-33.el7.x86_64 65/174 Installing : expat-2.1.0-10.el7_3.x86_64 66/174 Installing : libcap-ng-0.7.5-4.el7.x86_64 67/174 Installing : audit-libs-2.8.1-3.el7_5.1.x86_64 68/174 Installing : cracklib-dicts-2.9.0-11.el7.x86_64 69/174 Installing : libpwquality-1.2.3-5.el7.x86_64 70/174 Installing : pam-1.1.8-22.el7.x86_64 71/174 Installing : sqlite-3.7.17-8.el7.x86_64 72/174 Installing : nss-softokn-3.36.0-5.el7_5.x86_64 73/174 Installing : nss-pem-1.0.3-4.el7.x86_64 74/174 Installing : nss-sysinit-3.36.0-7.el7_5.x86_64 75/174 Installing : nss-3.36.0-7.el7_5.x86_64 76/174 Installing : 2:tar-1.26-34.el7.x86_64 77/174 Installing : lz4-1.7.5-2.el7.x86_64 78/174 Installing : gdbm-1.10-8.el7.x86_64 79/174 Installing : python-libs-2.7.5-69.el7_5.x86_64 80/174 Installing : gdb-7.6.1-110.el7.x86_64 81/174 Installing : nss-tools-3.36.0-7.el7_5.x86_64 82/174 Installing : file-5.11-33.el7.x86_64 83/174 Installing : cpp-4.8.5-28.el7_5.1.x86_64 84/174 Installing : libassuan-2.1.0-3.el7.x86_64 85/174 Installing : libdb-utils-5.3.21-24.el7.x86_64 86/174 Installing : cyrus-sasl-lib-2.1.26-23.el7.x86_64 87/174 Installing : dwz-0.11-3.el7.x86_64 88/174 Installing : libxml2-2.9.1-6.el7_2.3.x86_64 89/174 Installing : glib2-2.54.2-2.el7.x86_64 90/174 Installing : shared-mime-info-1.8-4.el7.x86_64 91/174 Installing : 1:pkgconfig-0.27.1-4.el7.x86_64 92/174 Installing : kmod-libs-20-21.el7.x86_64 93/174 Installing : bzip2-1.0.6-13.el7.x86_64 94/174 Installing : unzip-6.0-19.el7.x86_64 95/174 Installing : zip-3.0-11.el7.x86_64 96/174 Installing : libssh2-1.4.3-10.el7_2.1.x86_64 97/174 Installing : groff-base-1.22.2-8.el7.x86_64 98/174 Installing : 1:perl-parent-0.225-244.el7.noarch 99/174 Installing : perl-HTTP-Tiny-0.033-3.el7.noarch 100/174 Installing : perl-podlators-2.5.1-3.el7.noarch 101/174 Installing : perl-Pod-Perldoc-3.20-4.el7.noarch 102/174 Installing : 1:perl-Pod-Escapes-1.04-292.el7.noarch 103/174 Installing : perl-Text-ParseWords-3.29-4.el7.noarch 104/174 Installing : perl-Encode-2.51-7.el7.x86_64 105/174 Installing : perl-Pod-Usage-1.63-3.el7.noarch 106/174 Installing : 4:perl-libs-5.16.3-292.el7.x86_64 107/174 Installing : 4:perl-macros-5.16.3-292.el7.x86_64 108/174 Installing : perl-Socket-2.010-4.el7.x86_64 109/174 Installing : 4:perl-Time-HiRes-1.9725-3.el7.x86_64 110/174 Installing : perl-threads-1.87-4.el7.x86_64 111/174 Installing : perl-Storable-2.45-3.el7.x86_64 112/174 Installing : perl-Carp-1.26-244.el7.noarch 113/174 Installing : perl-Filter-1.49-3.el7.x86_64 114/174 Installing : perl-Exporter-5.68-3.el7.noarch 115/174 Installing : perl-constant-1.27-2.el7.noarch 116/174 Installing : perl-Time-Local-1.2300-2.el7.noarch 117/174 Installing : perl-threads-shared-1.43-6.el7.x86_64 118/174 Installing : perl-File-Temp-0.23.01-3.el7.noarch 119/174 Installing : perl-File-Path-2.09-2.el7.noarch 120/174 Installing : perl-PathTools-3.40-5.el7.x86_64 121/174 Installing : perl-Scalar-List-Utils-1.27-248.el7.x86_64 122/174 Installing : 1:perl-Pod-Simple-3.28-4.el7.noarch 123/174 Installing : perl-Getopt-Long-2.40-3.el7.noarch 124/174 Installing : 4:perl-5.16.3-292.el7.x86_64 125/174 Installing : perl-Thread-Queue-3.02-2.el7.noarch 126/174 Installing : patch-2.7.1-10.el7_5.x86_64 127/174 Installing : acl-2.2.51-14.el7.x86_64 128/174 Installing : libgomp-4.8.5-28.el7_5.1.x86_64 129/174 Installing : libidn-1.28-4.el7.x86_64 130/174 Installing : libcurl-7.29.0-46.el7.x86_64 131/174 Installing : curl-7.29.0-46.el7.x86_64 132/174 Installing : rpm-libs-4.11.3-32.el7.x86_64 133/174 Installing : rpm-4.11.3-32.el7.x86_64 134/174 Installing : openldap-2.4.44-15.el7_5.x86_64 135/174 Installing : libuser-0.60-9.el7.x86_64 136/174 Installing : pinentry-0.8.1-17.el7.x86_64 137/174 Installing : libstdc++-devel-4.8.5-28.el7_5.1.x86_64 138/174 Installing : pth-2.0.7-23.el7.x86_64 139/174 Installing : gnupg2-2.0.22-5.el7_5.x86_64 140/174 Installing : rpm-build-libs-4.11.3-32.el7.x86_64 141/174 Installing : ustr-1.0.4-16.el7.x86_64 142/174 Installing : libsemanage-2.5-11.el7.x86_64 143/174 Installing : 2:shadow-utils-4.1.5.1-24.el7.x86_64 144/174 Installing : libutempter-1.1.6-4.el7.x86_64 145/174 Installing : 1:hardlink-1.0-19.el7.x86_64 146/174 Installing : qrencode-libs-3.4.1-3.el7.x86_64 147/174 Installing : kpartx-0.4.9-119.el7_5.1.x86_64 148/174 Installing : 7:device-mapper-1.02.146-4.el7.x86_64 149/174 Installing : util-linux-2.23.2-52.el7_5.1.x86_64 150/174 Installing : procps-ng-3.3.10-17.el7_5.2.x86_64 151/174 Installing : 7:device-mapper-libs-1.02.146-4.el7.x86_64 152/174 Installing : cryptsetup-libs-1.7.4-4.el7.x86_64 153/174 Installing : dracut-033-535.el7_5.1.x86_64 154/174 Installing : kmod-20-21.el7.x86_64 155/174 Installing : elfutils-libs-0.170-4.el7.x86_64 156/174 Installing : systemd-libs-219-57.el7_5.3.x86_64 157/174 Installing : 1:dbus-libs-1.10.24-7.el7.x86_64 158/174 Installing : systemd-219-57.el7_5.3.x86_64 159/174 Running in chroot, ignoring request. Installing : 1:dbus-1.10.24-7.el7.x86_64 160/174 Installing : elfutils-default-yama-scope-0.170-4.el7.noarch 161/174 Installing : elfutils-0.170-4.el7.x86_64 162/174 Installing : perl-srpm-macros-1-8.el7.noarch 163/174 Installing : redhat-rpm-config-9.1.0-80.el7.centos.noarch 164/174 Installing : kernel-headers-3.10.0-862.14.4.el7.x86_64 165/174 Installing : glibc-headers-2.17-222.el7.x86_64 166/174 Installing : glibc-devel-2.17-222.el7.x86_64 167/174 Installing : gcc-4.8.5-28.el7_5.1.x86_64 168/174 Installing : gcc-c++-4.8.5-28.el7_5.1.x86_64 169/174 Installing : rpm-build-4.11.3-32.el7.x86_64 170/174 Installing : epel-release-7-11.noarch 171/174 Installing : epel-rpm-macros-7-19.noarch 172/174 Installing : which-2.20-7.el7.x86_64 173/174 Installing : 1:make-3.82-23.el7.x86_64 174/174 Verifying : perl-HTTP-Tiny-0.033-3.el7.noarch 1/174 Verifying : 1:pkgconfig-0.27.1-4.el7.x86_64 2/174 Verifying : glibc-devel-2.17-222.el7.x86_64 3/174 Verifying : pcre-8.32-17.el7.x86_64 4/174 Verifying : nss-tools-3.36.0-7.el7_5.x86_64 5/174 Verifying : libsemanage-2.5-11.el7.x86_64 6/174 Verifying : acl-2.2.51-14.el7.x86_64 7/174 Verifying : pth-2.0.7-23.el7.x86_64 8/174 Verifying : libgomp-4.8.5-28.el7_5.1.x86_64 9/174 Verifying : epel-release-7-11.noarch 10/174 Verifying : which-2.20-7.el7.x86_64 11/174 Verifying : gcc-4.8.5-28.el7_5.1.x86_64 12/174 Verifying : groff-base-1.22.2-8.el7.x86_64 13/174 Verifying : perl-File-Temp-0.23.01-3.el7.noarch 14/174 Verifying : python-rpm-macros-3-22.el7.noarch 15/174 Verifying : nss-pem-1.0.3-4.el7.x86_64 16/174 Verifying : file-libs-5.11-33.el7.x86_64 17/174 Verifying : perl-Socket-2.010-4.el7.x86_64 18/174 Verifying : p11-kit-0.23.5-3.el7.x86_64 19/174 Verifying : dracut-033-535.el7_5.1.x86_64 20/174 Verifying : 1:make-3.82-23.el7.x86_64 21/174 Verifying : 1:perl-Pod-Escapes-1.04-292.el7.noarch 22/174 Verifying : kernel-headers-3.10.0-862.14.4.el7.x86_64 23/174 Verifying : systemd-libs-219-57.el7_5.3.x86_64 24/174 Verifying : libcom_err-1.42.9-12.el7_5.x86_64 25/174 Verifying : nss-sysinit-3.36.0-7.el7_5.x86_64 26/174 Verifying : cracklib-dicts-2.9.0-11.el7.x86_64 27/174 Verifying : 7:device-mapper-1.02.146-4.el7.x86_64 28/174 Verifying : perl-File-Path-2.09-2.el7.noarch 29/174 Verifying : libselinux-2.5-12.el7.x86_64 30/174 Verifying : libassuan-2.1.0-3.el7.x86_64 31/174 Verifying : gdb-7.6.1-110.el7.x86_64 32/174 Verifying : perl-Text-ParseWords-3.29-4.el7.noarch 33/174 Verifying : chkconfig-1.7.4-1.el7.x86_64 34/174 Verifying : ustr-1.0.4-16.el7.x86_64 35/174 Verifying : lua-5.1.4-15.el7.x86_64 36/174 Verifying : centos-release-7-5.1804.5.el7.centos.x86_64 37/174 Verifying : openldap-2.4.44-15.el7_5.x86_64 38/174 Verifying : libutempter-1.1.6-4.el7.x86_64 39/174 Verifying : 7:device-mapper-libs-1.02.146-4.el7.x86_64 40/174 Verifying : util-linux-2.23.2-52.el7_5.1.x86_64 41/174 Verifying : libffi-3.0.13-18.el7.x86_64 42/174 Verifying : setup-2.8.71-9.el7.noarch 43/174 Verifying : 4:perl-Time-HiRes-1.9725-3.el7.x86_64 44/174 Verifying : ncurses-libs-5.9-14.20130511.el7_4.x86_64 45/174 Verifying : 1:openssl-libs-1.0.2k-12.el7.x86_64 46/174 Verifying : kpartx-0.4.9-119.el7_5.1.x86_64 47/174 Verifying : nss-util-3.36.0-1.el7_5.x86_64 48/174 Verifying : bzip2-1.0.6-13.el7.x86_64 49/174 Verifying : python-srpm-macros-3-22.el7.noarch 50/174 Verifying : basesystem-10.0-7.el7.centos.noarch 51/174 Verifying : libverto-0.2.5-4.el7.x86_64 52/174 Verifying : readline-6.2-10.el7.x86_64 53/174 Verifying : 4:perl-libs-5.16.3-292.el7.x86_64 54/174 Verifying : glibc-2.17-222.el7.x86_64 55/174 Verifying : info-5.1-5.el7.x86_64 56/174 Verifying : libcurl-7.29.0-46.el7.x86_64 57/174 Verifying : unzip-6.0-19.el7.x86_64 58/174 Verifying : libuuid-2.23.2-52.el7_5.1.x86_64 59/174 Verifying : libgcc-4.8.5-28.el7_5.1.x86_64 60/174 Verifying : rpm-build-4.11.3-32.el7.x86_64 61/174 Verifying : bzip2-libs-1.0.6-13.el7.x86_64 62/174 Verifying : lz4-1.7.5-2.el7.x86_64 63/174 Verifying : bash-4.2.46-30.el7.x86_64 64/174 Verifying : 2:shadow-utils-4.1.5.1-24.el7.x86_64 65/174 Verifying : libmpc-1.0.1-3.el7.x86_64 66/174 Verifying : coreutils-8.22-21.el7.x86_64 67/174 Verifying : libsepol-2.5-8.1.el7.x86_64 68/174 Verifying : perl-Pod-Usage-1.63-3.el7.noarch 69/174 Verifying : gcc-c++-4.8.5-28.el7_5.1.x86_64 70/174 Verifying : 4:perl-5.16.3-292.el7.x86_64 71/174 Verifying : perl-Encode-2.51-7.el7.x86_64 72/174 Verifying : nss-softokn-3.36.0-5.el7_5.x86_64 73/174 Verifying : ca-certificates-2018.2.22-70.0.el7_5.noarch 74/174 Verifying : sqlite-3.7.17-8.el7.x86_64 75/174 Verifying : libuser-0.60-9.el7.x86_64 76/174 Verifying : rpm-build-libs-4.11.3-32.el7.x86_64 77/174 Verifying : perl-threads-1.87-4.el7.x86_64 78/174 Verifying : 1:hardlink-1.0-19.el7.x86_64 79/174 Verifying : cracklib-2.9.0-11.el7.x86_64 80/174 Verifying : libgpg-error-1.12-3.el7.x86_64 81/174 Verifying : perl-Getopt-Long-2.40-3.el7.noarch 82/174 Verifying : rpm-4.11.3-32.el7.x86_64 83/174 Verifying : gnupg2-2.0.22-5.el7_5.x86_64 84/174 Verifying : file-5.11-33.el7.x86_64 85/174 Verifying : popt-1.13-16.el7.x86_64 86/174 Verifying : gzip-1.5-10.el7.x86_64 87/174 Verifying : libdb-utils-5.3.21-24.el7.x86_64 88/174 Verifying : curl-7.29.0-46.el7.x86_64 89/174 Verifying : perl-threads-shared-1.43-6.el7.x86_64 90/174 Verifying : perl-Storable-2.45-3.el7.x86_64 91/174 Verifying : qrencode-libs-3.4.1-3.el7.x86_64 92/174 Verifying : 4:perl-macros-5.16.3-292.el7.x86_64 93/174 Verifying : cpio-2.11-27.el7.x86_64 94/174 Verifying : libattr-2.4.46-13.el7.x86_64 95/174 Verifying : libidn-1.28-4.el7.x86_64 96/174 Verifying : gawk-4.0.2-4.el7_3.1.x86_64 97/174 Verifying : 1:perl-parent-0.225-244.el7.noarch 98/174 Verifying : perl-srpm-macros-1-8.el7.noarch 99/174 Verifying : kmod-20-21.el7.x86_64 100/174 Verifying : python-libs-2.7.5-69.el7_5.x86_64 101/174 Verifying : elfutils-0.170-4.el7.x86_64 102/174 Verifying : elfutils-libs-0.170-4.el7.x86_64 103/174 Verifying : redhat-rpm-config-9.1.0-80.el7.centos.noarch 104/174 Verifying : grep-2.20-3.el7.x86_64 105/174 Verifying : libdb-5.3.21-24.el7.x86_64 106/174 Verifying : filesystem-3.2-25.el7.x86_64 107/174 Verifying : perl-Carp-1.26-244.el7.noarch 108/174 Verifying : libssh2-1.4.3-10.el7_2.1.x86_64 109/174 Verifying : 1:dbus-libs-1.10.24-7.el7.x86_64 110/174 Verifying : gdbm-1.10-8.el7.x86_64 111/174 Verifying : cpp-4.8.5-28.el7_5.1.x86_64 112/174 Verifying : systemd-219-57.el7_5.3.x86_64 113/174 Verifying : patch-2.7.1-10.el7_5.x86_64 114/174 Verifying : glibc-common-2.17-222.el7.x86_64 115/174 Verifying : xz-libs-5.2.2-1.el7.x86_64 116/174 Verifying : binutils-2.27-28.base.el7_5.1.x86_64 117/174 Verifying : procps-ng-3.3.10-17.el7_5.2.x86_64 118/174 Verifying : perl-podlators-2.5.1-3.el7.noarch 119/174 Verifying : pam-1.1.8-22.el7.x86_64 120/174 Verifying : audit-libs-2.8.1-3.el7_5.1.x86_64 121/174 Verifying : nss-softokn-freebl-3.36.0-5.el7_5.x86_64 122/174 Verifying : libblkid-2.23.2-52.el7_5.1.x86_64 123/174 Verifying : nspr-4.19.0-1.el7_5.x86_64 124/174 Verifying : mpfr-3.1.1-4.el7.x86_64 125/174 Verifying : perl-Filter-1.49-3.el7.x86_64 126/174 Verifying : dwz-0.11-3.el7.x86_64 127/174 Verifying : ncurses-5.9-14.20130511.el7_4.x86_64 128/174 Verifying : ncurses-base-5.9-14.20130511.el7_4.noarch 129/174 Verifying : expat-2.1.0-10.el7_3.x86_64 130/174 Verifying : elfutils-libelf-0.170-4.el7.x86_64 131/174 Verifying : epel-rpm-macros-7-19.noarch 132/174 Verifying : libtasn1-4.10-1.el7.x86_64 133/174 Verifying : perl-Exporter-5.68-3.el7.noarch 134/174 Verifying : perl-constant-1.27-2.el7.noarch 135/174 Verifying : perl-PathTools-3.40-5.el7.x86_64 136/174 Verifying : glibc-headers-2.17-222.el7.x86_64 137/174 Verifying : keyutils-libs-1.5.8-3.el7.x86_64 138/174 Verifying : pinentry-0.8.1-17.el7.x86_64 139/174 Verifying : nss-3.36.0-7.el7_5.x86_64 140/174 Verifying : cryptsetup-libs-1.7.4-4.el7.x86_64 141/174 Verifying : 1:dbus-1.10.24-7.el7.x86_64 142/174 Verifying : shared-mime-info-1.8-4.el7.x86_64 143/174 Verifying : libstdc++-devel-4.8.5-28.el7_5.1.x86_64 144/174 Verifying : perl-Thread-Queue-3.02-2.el7.noarch 145/174 Verifying : 1:perl-Pod-Simple-3.28-4.el7.noarch 146/174 Verifying : perl-Time-Local-1.2300-2.el7.noarch 147/174 Verifying : zlib-1.2.7-17.el7.x86_64 148/174 Verifying : perl-Pod-Perldoc-3.20-4.el7.noarch 149/174 Verifying : libmount-2.23.2-52.el7_5.1.x86_64 150/174 Verifying : libxml2-2.9.1-6.el7_2.3.x86_64 151/174 Verifying : kmod-libs-20-21.el7.x86_64 152/174 Verifying : cyrus-sasl-lib-2.1.26-23.el7.x86_64 153/174 Verifying : libcap-2.22-9.el7.x86_64 154/174 Verifying : xz-5.2.2-1.el7.x86_64 155/174 Verifying : libcap-ng-0.7.5-4.el7.x86_64 156/174 Verifying : 1:gmp-6.0.0-15.el7.x86_64 157/174 Verifying : libacl-2.2.51-14.el7.x86_64 158/174 Verifying : perl-Scalar-List-Utils-1.27-248.el7.x86_64 159/174 Verifying : p11-kit-trust-0.23.5-3.el7.x86_64 160/174 Verifying : krb5-libs-1.15.1-19.el7.x86_64 161/174 Verifying : libgcrypt-1.5.3-14.el7.x86_64 162/174 Verifying : tzdata-2018f-2.el7.noarch 163/174 Verifying : python2-rpm-macros-3-22.el7.noarch 164/174 Verifying : sed-4.2.2-5.el7.x86_64 165/174 Verifying : elfutils-default-yama-scope-0.170-4.el7.noarch 166/174 Verifying : 1:findutils-4.5.11-5.el7.x86_64 167/174 Verifying : glib2-2.54.2-2.el7.x86_64 168/174 Verifying : 2:tar-1.26-34.el7.x86_64 169/174 Verifying : zip-3.0-11.el7.x86_64 170/174 Verifying : libpwquality-1.2.3-5.el7.x86_64 171/174 Verifying : rpm-libs-4.11.3-32.el7.x86_64 172/174 Verifying : libstdc++-4.8.5-28.el7_5.1.x86_64 173/174 Verifying : diffutils-3.3-4.el7.x86_64 174/174 Installed: bash.x86_64 0:4.2.46-30.el7 bzip2.x86_64 0:1.0.6-13.el7 coreutils.x86_64 0:8.22-21.el7 cpio.x86_64 0:2.11-27.el7 diffutils.x86_64 0:3.3-4.el7 epel-release.noarch 0:7-11 epel-rpm-macros.noarch 0:7-19 findutils.x86_64 1:4.5.11-5.el7 gawk.x86_64 0:4.0.2-4.el7_3.1 gcc.x86_64 0:4.8.5-28.el7_5.1 gcc-c++.x86_64 0:4.8.5-28.el7_5.1 grep.x86_64 0:2.20-3.el7 gzip.x86_64 0:1.5-10.el7 info.x86_64 0:5.1-5.el7 make.x86_64 1:3.82-23.el7 patch.x86_64 0:2.7.1-10.el7_5 redhat-rpm-config.noarch 0:9.1.0-80.el7.centos rpm-build.x86_64 0:4.11.3-32.el7 sed.x86_64 0:4.2.2-5.el7 shadow-utils.x86_64 2:4.1.5.1-24.el7 tar.x86_64 2:1.26-34.el7 unzip.x86_64 0:6.0-19.el7 util-linux.x86_64 0:2.23.2-52.el7_5.1 which.x86_64 0:2.20-7.el7 xz.x86_64 0:5.2.2-1.el7 Dependency Installed: acl.x86_64 0:2.2.51-14.el7 audit-libs.x86_64 0:2.8.1-3.el7_5.1 basesystem.noarch 0:10.0-7.el7.centos binutils.x86_64 0:2.27-28.base.el7_5.1 bzip2-libs.x86_64 0:1.0.6-13.el7 ca-certificates.noarch 0:2018.2.22-70.0.el7_5 centos-release.x86_64 0:7-5.1804.5.el7.centos chkconfig.x86_64 0:1.7.4-1.el7 cpp.x86_64 0:4.8.5-28.el7_5.1 cracklib.x86_64 0:2.9.0-11.el7 cracklib-dicts.x86_64 0:2.9.0-11.el7 cryptsetup-libs.x86_64 0:1.7.4-4.el7 curl.x86_64 0:7.29.0-46.el7 cyrus-sasl-lib.x86_64 0:2.1.26-23.el7 dbus.x86_64 1:1.10.24-7.el7 dbus-libs.x86_64 1:1.10.24-7.el7 device-mapper.x86_64 7:1.02.146-4.el7 device-mapper-libs.x86_64 7:1.02.146-4.el7 dracut.x86_64 0:033-535.el7_5.1 dwz.x86_64 0:0.11-3.el7 elfutils.x86_64 0:0.170-4.el7 elfutils-default-yama-scope.noarch 0:0.170-4.el7 elfutils-libelf.x86_64 0:0.170-4.el7 elfutils-libs.x86_64 0:0.170-4.el7 expat.x86_64 0:2.1.0-10.el7_3 file.x86_64 0:5.11-33.el7 file-libs.x86_64 0:5.11-33.el7 filesystem.x86_64 0:3.2-25.el7 gdb.x86_64 0:7.6.1-110.el7 gdbm.x86_64 0:1.10-8.el7 glib2.x86_64 0:2.54.2-2.el7 glibc.x86_64 0:2.17-222.el7 glibc-common.x86_64 0:2.17-222.el7 glibc-devel.x86_64 0:2.17-222.el7 glibc-headers.x86_64 0:2.17-222.el7 gmp.x86_64 1:6.0.0-15.el7 gnupg2.x86_64 0:2.0.22-5.el7_5 groff-base.x86_64 0:1.22.2-8.el7 hardlink.x86_64 1:1.0-19.el7 kernel-headers.x86_64 0:3.10.0-862.14.4.el7 keyutils-libs.x86_64 0:1.5.8-3.el7 kmod.x86_64 0:20-21.el7 kmod-libs.x86_64 0:20-21.el7 kpartx.x86_64 0:0.4.9-119.el7_5.1 krb5-libs.x86_64 0:1.15.1-19.el7 libacl.x86_64 0:2.2.51-14.el7 libassuan.x86_64 0:2.1.0-3.el7 libattr.x86_64 0:2.4.46-13.el7 libblkid.x86_64 0:2.23.2-52.el7_5.1 libcap.x86_64 0:2.22-9.el7 libcap-ng.x86_64 0:0.7.5-4.el7 libcom_err.x86_64 0:1.42.9-12.el7_5 libcurl.x86_64 0:7.29.0-46.el7 libdb.x86_64 0:5.3.21-24.el7 libdb-utils.x86_64 0:5.3.21-24.el7 libffi.x86_64 0:3.0.13-18.el7 libgcc.x86_64 0:4.8.5-28.el7_5.1 libgcrypt.x86_64 0:1.5.3-14.el7 libgomp.x86_64 0:4.8.5-28.el7_5.1 libgpg-error.x86_64 0:1.12-3.el7 libidn.x86_64 0:1.28-4.el7 libmount.x86_64 0:2.23.2-52.el7_5.1 libmpc.x86_64 0:1.0.1-3.el7 libpwquality.x86_64 0:1.2.3-5.el7 libselinux.x86_64 0:2.5-12.el7 libsemanage.x86_64 0:2.5-11.el7 libsepol.x86_64 0:2.5-8.1.el7 libssh2.x86_64 0:1.4.3-10.el7_2.1 libstdc++.x86_64 0:4.8.5-28.el7_5.1 libstdc++-devel.x86_64 0:4.8.5-28.el7_5.1 libtasn1.x86_64 0:4.10-1.el7 libuser.x86_64 0:0.60-9.el7 libutempter.x86_64 0:1.1.6-4.el7 libuuid.x86_64 0:2.23.2-52.el7_5.1 libverto.x86_64 0:0.2.5-4.el7 libxml2.x86_64 0:2.9.1-6.el7_2.3 lua.x86_64 0:5.1.4-15.el7 lz4.x86_64 0:1.7.5-2.el7 mpfr.x86_64 0:3.1.1-4.el7 ncurses.x86_64 0:5.9-14.20130511.el7_4 ncurses-base.noarch 0:5.9-14.20130511.el7_4 ncurses-libs.x86_64 0:5.9-14.20130511.el7_4 nspr.x86_64 0:4.19.0-1.el7_5 nss.x86_64 0:3.36.0-7.el7_5 nss-pem.x86_64 0:1.0.3-4.el7 nss-softokn.x86_64 0:3.36.0-5.el7_5 nss-softokn-freebl.x86_64 0:3.36.0-5.el7_5 nss-sysinit.x86_64 0:3.36.0-7.el7_5 nss-tools.x86_64 0:3.36.0-7.el7_5 nss-util.x86_64 0:3.36.0-1.el7_5 openldap.x86_64 0:2.4.44-15.el7_5 openssl-libs.x86_64 1:1.0.2k-12.el7 p11-kit.x86_64 0:0.23.5-3.el7 p11-kit-trust.x86_64 0:0.23.5-3.el7 pam.x86_64 0:1.1.8-22.el7 pcre.x86_64 0:8.32-17.el7 perl.x86_64 4:5.16.3-292.el7 perl-Carp.noarch 0:1.26-244.el7 perl-Encode.x86_64 0:2.51-7.el7 perl-Exporter.noarch 0:5.68-3.el7 perl-File-Path.noarch 0:2.09-2.el7 perl-File-Temp.noarch 0:0.23.01-3.el7 perl-Filter.x86_64 0:1.49-3.el7 perl-Getopt-Long.noarch 0:2.40-3.el7 perl-HTTP-Tiny.noarch 0:0.033-3.el7 perl-PathTools.x86_64 0:3.40-5.el7 perl-Pod-Escapes.noarch 1:1.04-292.el7 perl-Pod-Perldoc.noarch 0:3.20-4.el7 perl-Pod-Simple.noarch 1:3.28-4.el7 perl-Pod-Usage.noarch 0:1.63-3.el7 perl-Scalar-List-Utils.x86_64 0:1.27-248.el7 perl-Socket.x86_64 0:2.010-4.el7 perl-Storable.x86_64 0:2.45-3.el7 perl-Text-ParseWords.noarch 0:3.29-4.el7 perl-Thread-Queue.noarch 0:3.02-2.el7 perl-Time-HiRes.x86_64 4:1.9725-3.el7 perl-Time-Local.noarch 0:1.2300-2.el7 perl-constant.noarch 0:1.27-2.el7 perl-libs.x86_64 4:5.16.3-292.el7 perl-macros.x86_64 4:5.16.3-292.el7 perl-parent.noarch 1:0.225-244.el7 perl-podlators.noarch 0:2.5.1-3.el7 perl-srpm-macros.noarch 0:1-8.el7 perl-threads.x86_64 0:1.87-4.el7 perl-threads-shared.x86_64 0:1.43-6.el7 pinentry.x86_64 0:0.8.1-17.el7 pkgconfig.x86_64 1:0.27.1-4.el7 popt.x86_64 0:1.13-16.el7 procps-ng.x86_64 0:3.3.10-17.el7_5.2 pth.x86_64 0:2.0.7-23.el7 python-libs.x86_64 0:2.7.5-69.el7_5 python-rpm-macros.noarch 0:3-22.el7 python-srpm-macros.noarch 0:3-22.el7 python2-rpm-macros.noarch 0:3-22.el7 qrencode-libs.x86_64 0:3.4.1-3.el7 readline.x86_64 0:6.2-10.el7 rpm.x86_64 0:4.11.3-32.el7 rpm-build-libs.x86_64 0:4.11.3-32.el7 rpm-libs.x86_64 0:4.11.3-32.el7 setup.noarch 0:2.8.71-9.el7 shared-mime-info.x86_64 0:1.8-4.el7 sqlite.x86_64 0:3.7.17-8.el7 systemd.x86_64 0:219-57.el7_5.3 systemd-libs.x86_64 0:219-57.el7_5.3 tzdata.noarch 0:2018f-2.el7 ustr.x86_64 0:1.0.4-16.el7 xz-libs.x86_64 0:5.2.2-1.el7 zip.x86_64 0:3.0-11.el7 zlib.x86_64 0:1.2.7-17.el7 Complete! Finish: yum install Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: Start: buildsrpm Start: rpmbuild -bs warning: bogus date in %changelog: Wed Aug 24 2018 Christoph Junghans - 20180822-2 Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/lammps-20180822-3.el7.src.rpm Finish: rpmbuild -bs Finish: buildsrpm INFO: Done(/tmp/tmpcy_i267q/lammps.spec) Config(child) 1 minutes 19 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running: unbuffer /usr/bin/mock --rebuild /var/lib/copr-rpmbuild/results/lammps-20180822-3.el7.src.rpm --configdir /var/lib/copr-rpmbuild/results/configs --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1543211181.393983 -r child WARNING: Could not find required logging config file: /var/lib/copr-rpmbuild/results/configs/logging.ini. Using default... INFO: mock.py version 1.4.13 starting (python version = 3.6.5)... Start: init plugins INFO: tmpfs initialized INFO: selinux disabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins Start: run INFO: Start(/var/lib/copr-rpmbuild/results/lammps-20180822-3.el7.src.rpm) Config(829473-epel-7-x86_64) Start: clean chroot Finish: clean chroot Start: chroot init INFO: mounting tmpfs at /var/lib/mock/829473-epel-7-x86_64-1543211181.393983/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled HW Info plugin Mock Version: 1.4.13 INFO: Mock Version: 1.4.13 Start: yum update Yum command has been deprecated, use dnf instead. See 'man dnf' and 'man yum2dnf' for more information. copr_base | 3.5 kB 00:00 base | 3.6 kB 00:00 epel | 3.2 kB 00:00 extras | 3.4 kB 00:00 sclo | 2.9 kB 00:00 sclo-rh | 3.0 kB 00:00 updates | 3.4 kB 00:00 (1/7): copr_base/primary_db | 43 kB 00:00 (2/7): epel/primary | 3.6 MB 00:00 (3/7): extras/primary_db | 205 kB 00:00 (4/7): updates/primary_db | 6.0 MB 00:00 (5/7): sclo/primary_db | 294 kB 00:00 (6/7): sclo-rh/primary_db | 3.7 MB 00:01 (7/7): base/primary_db | 5.9 MB 00:02 epel 12719/12719 base/group_gz | 166 kB 00:00 epel/group_gz | 88 kB 00:00 No packages marked for update Finish: yum update Finish: chroot init Start: build phase for lammps-20180822-3.el7.src.rpm Start: build setup for lammps-20180822-3.el7.src.rpm warning: bogus date in %changelog: Wed Aug 24 2018 Christoph Junghans - 20180822-2 Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/lammps-20180822-3.el7.src.rpm Yum-utils package has been deprecated, use dnf instead. See 'man yum2dnf' for more information. copr_base | 3.5 kB 00:00 Getting requirements for lammps-20180822-3.el7.src --> fftw-devel-3.3.3-8.el7.x86_64 --> Already installed : gcc-c++-4.8.5-28.el7_5.1.x86_64 --> gcc-gfortran-4.8.5-28.el7_5.1.x86_64 --> 2:libpng-devel-1.5.13-7.el7_2.x86_64 --> libjpeg-turbo-devel-1.2.90-5.el7.x86_64 --> openmpi-devel-4.0.0-1.el7.x86_64 --> mpich-3.0-devel-3.0.4-10.el7.x86_64 --> python34-devel-3.4.9-1.el7.x86_64 --> fftw-devel-3.3.3-8.el7.x86_64 --> zlib-devel-1.2.7-17.el7.x86_64 --> gsl-devel-1.15-13.el7.x86_64 --> voro++-devel-0.4.6-7.el7.x86_64 --> openblas-devel-0.3.3-2.el7.x86_64 --> cmake3-3.12.2-1.el7.x86_64 --> ocl-icd-devel-2.2.12-1.el7.x86_64 --> opencl-headers-2.2-1.20180306gite986688.el7.noarch --> Running transaction check ---> Package cmake3.x86_64 0:3.12.2-1.el7 will be installed --> Processing Dependency: cmake3-data = 3.12.2-1.el7 for package: cmake3-3.12.2-1.el7.x86_64 --> Processing Dependency: libuv.so.1()(64bit) for package: cmake3-3.12.2-1.el7.x86_64 --> Processing Dependency: librhash.so.0()(64bit) for package: cmake3-3.12.2-1.el7.x86_64 --> Processing Dependency: libjsoncpp.so.0()(64bit) for package: cmake3-3.12.2-1.el7.x86_64 --> Processing Dependency: libarchive.so.13()(64bit) for package: cmake3-3.12.2-1.el7.x86_64 ---> Package fftw-devel.x86_64 0:3.3.3-8.el7 will be installed --> Processing Dependency: fftw-libs(x86-64) = 3.3.3-8.el7 for package: fftw-devel-3.3.3-8.el7.x86_64 --> Processing Dependency: fftw(x86-64) = 3.3.3-8.el7 for package: fftw-devel-3.3.3-8.el7.x86_64 --> Processing Dependency: libfftw3l_threads.so.3()(64bit) for package: fftw-devel-3.3.3-8.el7.x86_64 --> Processing Dependency: libfftw3l_omp.so.3()(64bit) for package: fftw-devel-3.3.3-8.el7.x86_64 --> Processing Dependency: libfftw3l.so.3()(64bit) for package: fftw-devel-3.3.3-8.el7.x86_64 --> Processing Dependency: libfftw3f_threads.so.3()(64bit) for package: fftw-devel-3.3.3-8.el7.x86_64 --> Processing Dependency: libfftw3f_omp.so.3()(64bit) for package: fftw-devel-3.3.3-8.el7.x86_64 --> Processing Dependency: libfftw3f.so.3()(64bit) for package: fftw-devel-3.3.3-8.el7.x86_64 --> Processing Dependency: libfftw3_threads.so.3()(64bit) for package: fftw-devel-3.3.3-8.el7.x86_64 --> Processing Dependency: libfftw3_omp.so.3()(64bit) for package: fftw-devel-3.3.3-8.el7.x86_64 --> Processing Dependency: libfftw3.so.3()(64bit) for package: fftw-devel-3.3.3-8.el7.x86_64 ---> Package gcc-gfortran.x86_64 0:4.8.5-28.el7_5.1 will be installed --> Processing Dependency: libquadmath-devel = 4.8.5-28.el7_5.1 for package: gcc-gfortran-4.8.5-28.el7_5.1.x86_64 --> Processing Dependency: libquadmath = 4.8.5-28.el7_5.1 for package: gcc-gfortran-4.8.5-28.el7_5.1.x86_64 --> Processing Dependency: libgfortran = 4.8.5-28.el7_5.1 for package: gcc-gfortran-4.8.5-28.el7_5.1.x86_64 --> Processing Dependency: libgfortran.so.3()(64bit) for package: gcc-gfortran-4.8.5-28.el7_5.1.x86_64 ---> Package gsl-devel.x86_64 0:1.15-13.el7 will be installed --> Processing Dependency: gsl = 1.15-13.el7 for package: gsl-devel-1.15-13.el7.x86_64 --> Processing Dependency: automake for package: gsl-devel-1.15-13.el7.x86_64 --> Processing Dependency: libgslcblas.so.0()(64bit) for package: gsl-devel-1.15-13.el7.x86_64 --> Processing Dependency: libgsl.so.0()(64bit) for package: gsl-devel-1.15-13.el7.x86_64 ---> Package libjpeg-turbo-devel.x86_64 0:1.2.90-5.el7 will be installed --> Processing Dependency: libjpeg-turbo(x86-64) = 1.2.90-5.el7 for package: libjpeg-turbo-devel-1.2.90-5.el7.x86_64 --> Processing Dependency: libjpeg.so.62()(64bit) for package: libjpeg-turbo-devel-1.2.90-5.el7.x86_64 ---> Package libpng-devel.x86_64 2:1.5.13-7.el7_2 will be installed --> Processing Dependency: libpng(x86-64) = 2:1.5.13-7.el7_2 for package: 2:libpng-devel-1.5.13-7.el7_2.x86_64 --> Processing Dependency: libpng15.so.15()(64bit) for package: 2:libpng-devel-1.5.13-7.el7_2.x86_64 ---> Package mpich-3.0-devel.x86_64 0:3.0.4-10.el7 will be installed --> Processing Dependency: mpich-3.0 = 3.0.4-10.el7 for package: mpich-3.0-devel-3.0.4-10.el7.x86_64 --> Processing Dependency: libopa.so.1()(64bit) for package: mpich-3.0-devel-3.0.4-10.el7.x86_64 --> Processing Dependency: libmpl.so.1()(64bit) for package: mpich-3.0-devel-3.0.4-10.el7.x86_64 --> Processing Dependency: libmpichf90.so.10()(64bit) for package: mpich-3.0-devel-3.0.4-10.el7.x86_64 --> Processing Dependency: libmpichcxx.so.10()(64bit) for package: mpich-3.0-devel-3.0.4-10.el7.x86_64 --> Processing Dependency: libmpich.so.10()(64bit) for package: mpich-3.0-devel-3.0.4-10.el7.x86_64 --> Processing Dependency: libfmpich.so.10()(64bit) for package: mpich-3.0-devel-3.0.4-10.el7.x86_64 ---> Package ocl-icd-devel.x86_64 0:2.2.12-1.el7 will be installed --> Processing Dependency: ocl-icd(x86-64) = 2.2.12-1.el7 for package: ocl-icd-devel-2.2.12-1.el7.x86_64 --> Processing Dependency: libOpenCL.so.1()(64bit) for package: ocl-icd-devel-2.2.12-1.el7.x86_64 ---> Package openblas-devel.x86_64 0:0.3.3-2.el7 will be installed --> Processing Dependency: openblas-threads64_(x86-64) = 0.3.3-2.el7 for package: openblas-devel-0.3.3-2.el7.x86_64 --> Processing Dependency: openblas-threads64(x86-64) = 0.3.3-2.el7 for package: openblas-devel-0.3.3-2.el7.x86_64 --> Processing Dependency: openblas-threads(x86-64) = 0.3.3-2.el7 for package: openblas-devel-0.3.3-2.el7.x86_64 --> Processing Dependency: openblas-serial64_(x86-64) = 0.3.3-2.el7 for package: openblas-devel-0.3.3-2.el7.x86_64 --> Processing Dependency: openblas-serial64(x86-64) = 0.3.3-2.el7 for package: openblas-devel-0.3.3-2.el7.x86_64 --> Processing Dependency: openblas-serial(x86-64) = 0.3.3-2.el7 for package: openblas-devel-0.3.3-2.el7.x86_64 --> Processing Dependency: openblas-openmp64_(x86-64) = 0.3.3-2.el7 for package: openblas-devel-0.3.3-2.el7.x86_64 --> Processing Dependency: openblas-openmp64(x86-64) = 0.3.3-2.el7 for package: openblas-devel-0.3.3-2.el7.x86_64 --> Processing Dependency: openblas-openmp(x86-64) = 0.3.3-2.el7 for package: openblas-devel-0.3.3-2.el7.x86_64 --> Processing Dependency: openblas(x86-64) = 0.3.3-2.el7 for package: openblas-devel-0.3.3-2.el7.x86_64 --> Processing Dependency: libopenblaso64_.so.0()(64bit) for package: openblas-devel-0.3.3-2.el7.x86_64 --> Processing Dependency: libopenblaso64.so.0()(64bit) for package: openblas-devel-0.3.3-2.el7.x86_64 --> Processing Dependency: libopenblaso.so.0()(64bit) for package: openblas-devel-0.3.3-2.el7.x86_64 ---> Package opencl-headers.noarch 0:2.2-1.20180306gite986688.el7 will be installed ---> Package openmpi-devel.x86_64 0:4.0.0-1.el7 will be installed --> Processing Dependency: openmpi = 4.0.0-1.el7 for package: openmpi-devel-4.0.0-1.el7.x86_64 --> Processing Dependency: rpm-mpi-hooks for package: openmpi-devel-4.0.0-1.el7.x86_64 --> Processing Dependency: libevent-2.0.so.5()(64bit) for package: openmpi-devel-4.0.0-1.el7.x86_64 --> Processing Dependency: libevent_pthreads-2.0.so.5()(64bit) for package: openmpi-devel-4.0.0-1.el7.x86_64 --> Processing Dependency: libhwloc.so.5()(64bit) for package: openmpi-devel-4.0.0-1.el7.x86_64 --> Processing Dependency: libmpi.so.40()(64bit) for package: openmpi-devel-4.0.0-1.el7.x86_64 --> Processing Dependency: libmpi_cxx.so.40()(64bit) for package: openmpi-devel-4.0.0-1.el7.x86_64 --> Processing Dependency: libmpi_java.so.40()(64bit) for package: openmpi-devel-4.0.0-1.el7.x86_64 --> Processing Dependency: libmpi_mpifh.so.40()(64bit) for package: openmpi-devel-4.0.0-1.el7.x86_64 --> Processing Dependency: libmpi_usempi.so.40()(64bit) for package: openmpi-devel-4.0.0-1.el7.x86_64 --> Processing Dependency: liboshmem.so.40()(64bit) for package: openmpi-devel-4.0.0-1.el7.x86_64 ---> Package python34-devel.x86_64 0:3.4.9-1.el7 will be installed --> Processing Dependency: python34-libs(x86-64) = 3.4.9-1.el7 for package: python34-devel-3.4.9-1.el7.x86_64 --> Processing Dependency: python34 = 3.4.9-1.el7 for package: python34-devel-3.4.9-1.el7.x86_64 --> Processing Dependency: /usr/bin/python3.4m for package: python34-devel-3.4.9-1.el7.x86_64 --> Processing Dependency: python3-rpm-macros for package: python34-devel-3.4.9-1.el7.x86_64 ---> Package voro++-devel.x86_64 0:0.4.6-7.el7 will be installed --> Processing Dependency: voro++(x86-64) = 0.4.6-7.el7 for package: voro++-devel-0.4.6-7.el7.x86_64 --> Processing Dependency: libvoro++.so.0()(64bit) for package: voro++-devel-0.4.6-7.el7.x86_64 ---> Package zlib-devel.x86_64 0:1.2.7-17.el7 will be installed --> Running transaction check ---> Package automake.noarch 0:1.13.4-3.el7 will be installed --> Processing Dependency: autoconf >= 2.65 for package: automake-1.13.4-3.el7.noarch --> Processing Dependency: perl(TAP::Parser) for package: automake-1.13.4-3.el7.noarch ---> Package cmake3-data.noarch 0:3.12.2-1.el7 will be installed --> Processing Dependency: emacs-filesystem >= 24.3 for package: cmake3-data-3.12.2-1.el7.noarch --> Processing Dependency: /usr/bin/python2 for package: cmake3-data-3.12.2-1.el7.noarch ---> Package fftw.x86_64 0:3.3.3-8.el7 will be installed ---> Package fftw-libs.x86_64 0:3.3.3-8.el7 will be installed ---> Package fftw-libs-double.x86_64 0:3.3.3-8.el7 will be installed ---> Package fftw-libs-long.x86_64 0:3.3.3-8.el7 will be installed ---> Package fftw-libs-single.x86_64 0:3.3.3-8.el7 will be installed ---> Package gsl.x86_64 0:1.15-13.el7 will be installed --> Processing Dependency: libsatlas.so.3()(64bit) for package: gsl-1.15-13.el7.x86_64 ---> Package hwloc-libs.x86_64 0:1.11.8-4.el7 will be installed --> Processing Dependency: libnuma.so.1(libnuma_1.2)(64bit) for package: hwloc-libs-1.11.8-4.el7.x86_64 --> Processing Dependency: libnuma.so.1(libnuma_1.1)(64bit) for package: hwloc-libs-1.11.8-4.el7.x86_64 --> Processing Dependency: libnuma.so.1()(64bit) for package: hwloc-libs-1.11.8-4.el7.x86_64 --> Processing Dependency: libltdl.so.7()(64bit) for package: hwloc-libs-1.11.8-4.el7.x86_64 ---> Package jsoncpp.x86_64 0:0.10.5-2.el7 will be installed ---> Package libarchive.x86_64 0:3.1.2-10.el7_2 will be installed --> Processing Dependency: liblzo2.so.2()(64bit) for package: libarchive-3.1.2-10.el7_2.x86_64 ---> Package libevent.x86_64 0:2.0.21-4.el7 will be installed ---> Package libgfortran.x86_64 0:4.8.5-28.el7_5.1 will be installed ---> Package libjpeg-turbo.x86_64 0:1.2.90-5.el7 will be installed ---> Package libpng.x86_64 2:1.5.13-7.el7_2 will be installed ---> Package libquadmath.x86_64 0:4.8.5-28.el7_5.1 will be installed ---> Package libquadmath-devel.x86_64 0:4.8.5-28.el7_5.1 will be installed ---> Package libuv.x86_64 1:1.23.2-1.el7 will be installed ---> Package mpich-3.0.x86_64 0:3.0.4-10.el7 will be installed --> Processing Dependency: environment-modules for package: mpich-3.0-3.0.4-10.el7.x86_64 ---> Package ocl-icd.x86_64 0:2.2.12-1.el7 will be installed ---> Package openblas.x86_64 0:0.3.3-2.el7 will be installed ---> Package openblas-openmp.x86_64 0:0.3.3-2.el7 will be installed ---> Package openblas-openmp64.x86_64 0:0.3.3-2.el7 will be installed ---> Package openblas-openmp64_.x86_64 0:0.3.3-2.el7 will be installed ---> Package openblas-serial.x86_64 0:0.3.3-2.el7 will be installed ---> Package openblas-serial64.x86_64 0:0.3.3-2.el7 will be installed ---> Package openblas-serial64_.x86_64 0:0.3.3-2.el7 will be installed ---> Package openblas-threads.x86_64 0:0.3.3-2.el7 will be installed ---> Package openblas-threads64.x86_64 0:0.3.3-2.el7 will be installed ---> Package openblas-threads64_.x86_64 0:0.3.3-2.el7 will be installed ---> Package openmpi.x86_64 0:4.0.0-1.el7 will be installed --> Processing Dependency: environment(modules) for package: openmpi-4.0.0-1.el7.x86_64 --> Processing Dependency: libfabric.so.1(FABRIC_1.0)(64bit) for package: openmpi-4.0.0-1.el7.x86_64 --> Processing Dependency: libfabric.so.1(FABRIC_1.1)(64bit) for package: openmpi-4.0.0-1.el7.x86_64 --> Processing Dependency: libibverbs.so.1(IBVERBS_1.0)(64bit) for package: openmpi-4.0.0-1.el7.x86_64 --> Processing Dependency: libibverbs.so.1(IBVERBS_1.1)(64bit) for package: openmpi-4.0.0-1.el7.x86_64 --> Processing Dependency: libpsm2.so.2(PSM2_1.0)(64bit) for package: openmpi-4.0.0-1.el7.x86_64 --> Processing Dependency: librdmacm.so.1(RDMACM_1.0)(64bit) for package: openmpi-4.0.0-1.el7.x86_64 --> Processing Dependency: openssh-clients for package: openmpi-4.0.0-1.el7.x86_64 --> Processing Dependency: libfabric.so.1()(64bit) for package: openmpi-4.0.0-1.el7.x86_64 --> Processing Dependency: libibverbs.so.1()(64bit) for package: openmpi-4.0.0-1.el7.x86_64 --> Processing Dependency: libosmcomp.so.3()(64bit) for package: openmpi-4.0.0-1.el7.x86_64 --> Processing Dependency: libpmix.so.2()(64bit) for package: openmpi-4.0.0-1.el7.x86_64 --> Processing Dependency: libpsm2.so.2()(64bit) for package: openmpi-4.0.0-1.el7.x86_64 --> Processing Dependency: libpsm_infinipath.so.1()(64bit) for package: openmpi-4.0.0-1.el7.x86_64 --> Processing Dependency: librdmacm.so.1()(64bit) for package: openmpi-4.0.0-1.el7.x86_64 --> Processing Dependency: libtorque.so.2()(64bit) for package: openmpi-4.0.0-1.el7.x86_64 --> Processing Dependency: libucm.so.0()(64bit) for package: openmpi-4.0.0-1.el7.x86_64 --> Processing Dependency: libucp.so.0()(64bit) for package: openmpi-4.0.0-1.el7.x86_64 --> Processing Dependency: libucs.so.0()(64bit) for package: openmpi-4.0.0-1.el7.x86_64 --> Processing Dependency: libuct.so.0()(64bit) for package: openmpi-4.0.0-1.el7.x86_64 ---> Package python3-rpm-macros.noarch 0:3-22.el7 will be installed ---> Package python34.x86_64 0:3.4.9-1.el7 will be installed ---> Package python34-libs.x86_64 0:3.4.9-1.el7 will be installed ---> Package rhash.x86_64 0:1.3.4-2.el7 will be installed ---> Package rpm-mpi-hooks.noarch 0:5-4.el7 will be installed ---> Package voro++.x86_64 0:0.4.6-7.el7 will be installed --> Running transaction check ---> Package Lmod.x86_64 0:6.6.3-1.el7 will be installed --> Processing Dependency: lua-term for package: Lmod-6.6.3-1.el7.x86_64 --> Processing Dependency: lua-posix for package: Lmod-6.6.3-1.el7.x86_64 --> Processing Dependency: lua-json for package: Lmod-6.6.3-1.el7.x86_64 --> Processing Dependency: lua-filesystem for package: Lmod-6.6.3-1.el7.x86_64 --> Processing Dependency: /usr/bin/tclsh for package: Lmod-6.6.3-1.el7.x86_64 ---> Package atlas.x86_64 0:3.10.1-12.el7 will be installed ---> Package autoconf.noarch 0:2.69-11.el7 will be installed --> Processing Dependency: m4 >= 1.4.14 for package: autoconf-2.69-11.el7.noarch --> Processing Dependency: perl(Data::Dumper) for package: autoconf-2.69-11.el7.noarch ---> Package emacs-filesystem.noarch 1:24.3-20.el7_4 will be installed ---> Package environment-modules.x86_64 0:3.2.10-10.el7 will be installed --> Processing Dependency: libX11.so.6()(64bit) for package: environment-modules-3.2.10-10.el7.x86_64 ---> Package infinipath-psm.x86_64 0:3.3-26_g604758e_open.2.el7 will be installed ---> Package libfabric.x86_64 0:1.5.3-1.el7 will be installed --> Processing Dependency: libnl-3.so.200(libnl_3)(64bit) for package: libfabric-1.5.3-1.el7.x86_64 --> Processing Dependency: libnl-route-3.so.200()(64bit) for package: libfabric-1.5.3-1.el7.x86_64 --> Processing Dependency: libnl-3.so.200()(64bit) for package: libfabric-1.5.3-1.el7.x86_64 ---> Package libibverbs.x86_64 0:15-7.el7_5 will be installed --> Processing Dependency: rdma-core(x86-64) = 15-7.el7_5 for package: libibverbs-15-7.el7_5.x86_64 ---> Package libpsm2.x86_64 0:10.3.8-3.el7 will be installed ---> Package librdmacm.x86_64 0:15-7.el7_5 will be installed ---> Package libtool-ltdl.x86_64 0:2.4.2-22.el7_3 will be installed ---> Package lzo.x86_64 0:2.06-8.el7 will be installed ---> Package numactl-libs.x86_64 0:2.0.9-7.el7 will be installed ---> Package opensm-libs.x86_64 0:3.3.20-2.el7 will be installed --> Processing Dependency: libibumad.so.3(IBUMAD_1.0)(64bit) for package: opensm-libs-3.3.20-2.el7.x86_64 --> Processing Dependency: libibumad.so.3()(64bit) for package: opensm-libs-3.3.20-2.el7.x86_64 ---> Package openssh-clients.x86_64 0:7.4p1-16.el7 will be installed --> Processing Dependency: openssh = 7.4p1-16.el7 for package: openssh-clients-7.4p1-16.el7.x86_64 --> Processing Dependency: fipscheck-lib(x86-64) >= 1.3.0 for package: openssh-clients-7.4p1-16.el7.x86_64 --> Processing Dependency: libfipscheck.so.1()(64bit) for package: openssh-clients-7.4p1-16.el7.x86_64 --> Processing Dependency: libedit.so.0()(64bit) for package: openssh-clients-7.4p1-16.el7.x86_64 ---> Package perl-Test-Harness.noarch 0:3.28-3.el7 will be installed ---> Package pmix.x86_64 0:3.0.2-1.el7 will be installed --> Processing Dependency: libmunge.so.2()(64bit) for package: pmix-3.0.2-1.el7.x86_64 ---> Package python.x86_64 0:2.7.5-69.el7_5 will be installed ---> Package torque-libs.x86_64 0:4.2.10-10.el7 will be installed --> Processing Dependency: torque = 4.2.10-10.el7 for package: torque-libs-4.2.10-10.el7.x86_64 --> Processing Dependency: munge for package: torque-libs-4.2.10-10.el7.x86_64 ---> Package ucx.x86_64 0:1.4.0-1.el7 will be installed --> Running transaction check ---> Package fipscheck-lib.x86_64 0:1.4.1-6.el7 will be installed --> Processing Dependency: /usr/bin/fipscheck for package: fipscheck-lib-1.4.1-6.el7.x86_64 ---> Package libX11.x86_64 0:1.6.5-1.el7 will be installed --> Processing Dependency: libX11-common >= 1.6.5-1.el7 for package: libX11-1.6.5-1.el7.x86_64 --> Processing Dependency: libxcb.so.1()(64bit) for package: libX11-1.6.5-1.el7.x86_64 ---> Package libedit.x86_64 0:3.0-12.20121213cvs.el7 will be installed ---> Package libibumad.x86_64 0:15-7.el7_5 will be installed ---> Package libnl3.x86_64 0:3.2.28-4.el7 will be installed ---> Package lua-filesystem.x86_64 0:1.6.2-2.el7 will be installed ---> Package lua-json.noarch 0:1.3.2-2.el7 will be installed --> Processing Dependency: lua-lpeg >= 0.8.1 for package: lua-json-1.3.2-2.el7.noarch ---> Package lua-posix.x86_64 0:32-2.el7 will be installed --> Processing Dependency: lua-bitop for package: lua-posix-32-2.el7.x86_64 ---> Package lua-term.x86_64 0:0.03-3.el7 will be installed ---> Package m4.x86_64 0:1.4.16-10.el7 will be installed ---> Package munge.x86_64 0:0.5.11-3.el7 will be installed ---> Package munge-libs.x86_64 0:0.5.11-3.el7 will be installed ---> Package openssh.x86_64 0:7.4p1-16.el7 will be installed ---> Package perl-Data-Dumper.x86_64 0:2.145-3.el7 will be installed ---> Package rdma-core.x86_64 0:15-7.el7_5 will be installed --> Processing Dependency: pciutils for package: rdma-core-15-7.el7_5.x86_64 --> Processing Dependency: initscripts for package: rdma-core-15-7.el7_5.x86_64 ---> Package tcl.x86_64 1:8.5.13-8.el7 will be installed ---> Package torque.x86_64 0:4.2.10-10.el7 will be installed --> Running transaction check ---> Package fipscheck.x86_64 0:1.4.1-6.el7 will be installed ---> Package initscripts.x86_64 0:9.49.41-1.el7_5.2 will be installed --> Processing Dependency: sysvinit-tools >= 2.87-5 for package: initscripts-9.49.41-1.el7_5.2.x86_64 --> Processing Dependency: iproute for package: initscripts-9.49.41-1.el7_5.2.x86_64 --> Processing Dependency: hostname for package: initscripts-9.49.41-1.el7_5.2.x86_64 --> Processing Dependency: /sbin/arping for package: initscripts-9.49.41-1.el7_5.2.x86_64 ---> Package libX11-common.noarch 0:1.6.5-1.el7 will be installed ---> Package libxcb.x86_64 0:1.12-1.el7 will be installed --> Processing Dependency: libXau.so.6()(64bit) for package: libxcb-1.12-1.el7.x86_64 ---> Package lua-bitop.x86_64 0:1.0.2-3.el7 will be installed ---> Package lua-lpeg.x86_64 0:0.12-1.el7 will be installed ---> Package pciutils.x86_64 0:3.5.1-3.el7 will be installed --> Processing Dependency: pciutils-libs = 3.5.1-3.el7 for package: pciutils-3.5.1-3.el7.x86_64 --> Processing Dependency: libpci.so.3(LIBPCI_3.5)(64bit) for package: pciutils-3.5.1-3.el7.x86_64 --> Processing Dependency: libpci.so.3(LIBPCI_3.3)(64bit) for package: pciutils-3.5.1-3.el7.x86_64 --> Processing Dependency: libpci.so.3(LIBPCI_3.1)(64bit) for package: pciutils-3.5.1-3.el7.x86_64 --> Processing Dependency: libpci.so.3(LIBPCI_3.0)(64bit) for package: pciutils-3.5.1-3.el7.x86_64 --> Processing Dependency: hwdata for package: pciutils-3.5.1-3.el7.x86_64 --> Processing Dependency: libpci.so.3()(64bit) for package: pciutils-3.5.1-3.el7.x86_64 --> Running transaction check ---> Package hostname.x86_64 0:3.13-3.el7 will be installed ---> Package hwdata.x86_64 0:0.252-8.8.el7 will be installed ---> Package iproute.x86_64 0:4.11.0-14.el7 will be installed --> Processing Dependency: libmnl.so.0(LIBMNL_1.0)(64bit) for package: iproute-4.11.0-14.el7.x86_64 --> Processing Dependency: libxtables.so.10()(64bit) for package: iproute-4.11.0-14.el7.x86_64 --> Processing Dependency: libmnl.so.0()(64bit) for package: iproute-4.11.0-14.el7.x86_64 ---> Package iputils.x86_64 0:20160308-10.el7 will be installed ---> Package libXau.x86_64 0:1.0.8-2.1.el7 will be installed ---> Package pciutils-libs.x86_64 0:3.5.1-3.el7 will be installed ---> Package sysvinit-tools.x86_64 0:2.88-14.dsf.el7 will be installed --> Running transaction check ---> Package iptables.x86_64 0:1.4.21-24.1.el7_5 will be installed --> Processing Dependency: libnfnetlink.so.0()(64bit) for package: iptables-1.4.21-24.1.el7_5.x86_64 --> Processing Dependency: libnetfilter_conntrack.so.3()(64bit) for package: iptables-1.4.21-24.1.el7_5.x86_64 ---> Package libmnl.x86_64 0:1.0.3-7.el7 will be installed --> Running transaction check ---> Package libnetfilter_conntrack.x86_64 0:1.0.6-1.el7_3 will be installed ---> Package libnfnetlink.x86_64 0:1.0.1-4.el7 will be installed --> Finished Dependency Resolution Dependencies Resolved ================================================================================ Package Arch Version Repository Size ================================================================================ Installing: cmake3 x86_64 3.12.2-1.el7 epel 7.4 M fftw-devel x86_64 3.3.3-8.el7 base 128 k gcc-gfortran x86_64 4.8.5-28.el7_5.1 updates 6.7 M gsl-devel x86_64 1.15-13.el7 base 446 k libjpeg-turbo-devel x86_64 1.2.90-5.el7 base 98 k libpng-devel x86_64 2:1.5.13-7.el7_2 base 122 k mpich-3.0-devel x86_64 3.0.4-10.el7 base 103 k ocl-icd-devel x86_64 2.2.12-1.el7 epel 15 k openblas-devel x86_64 0.3.3-2.el7 epel 88 k opencl-headers noarch 2.2-1.20180306gite986688.el7 epel 84 k openmpi-devel x86_64 4.0.0-1.el7 copr_base 872 k python34-devel x86_64 3.4.9-1.el7 epel 185 k voro++-devel x86_64 0.4.6-7.el7 epel 32 k zlib-devel x86_64 1.2.7-17.el7 base 50 k Installing for dependencies: Lmod x86_64 6.6.3-1.el7 epel 192 k atlas x86_64 3.10.1-12.el7 base 4.5 M autoconf noarch 2.69-11.el7 base 701 k automake noarch 1.13.4-3.el7 base 679 k cmake3-data noarch 3.12.2-1.el7 epel 1.3 M emacs-filesystem noarch 1:24.3-20.el7_4 base 58 k environment-modules x86_64 3.2.10-10.el7 base 107 k fftw x86_64 3.3.3-8.el7 base 45 k fftw-libs x86_64 3.3.3-8.el7 base 8.5 k fftw-libs-double x86_64 3.3.3-8.el7 base 759 k fftw-libs-long x86_64 3.3.3-8.el7 base 495 k fftw-libs-single x86_64 3.3.3-8.el7 base 766 k fipscheck x86_64 1.4.1-6.el7 base 21 k fipscheck-lib x86_64 1.4.1-6.el7 base 11 k gsl x86_64 1.15-13.el7 base 884 k hostname x86_64 3.13-3.el7 base 17 k hwdata x86_64 0.252-8.8.el7 base 2.3 M hwloc-libs x86_64 1.11.8-4.el7 base 1.6 M infinipath-psm x86_64 3.3-26_g604758e_open.2.el7 base 186 k initscripts x86_64 9.49.41-1.el7_5.2 updates 437 k iproute x86_64 4.11.0-14.el7 base 763 k iptables x86_64 1.4.21-24.1.el7_5 updates 432 k iputils x86_64 20160308-10.el7 base 148 k jsoncpp x86_64 0.10.5-2.el7 epel 82 k libX11 x86_64 1.6.5-1.el7 base 606 k libX11-common noarch 1.6.5-1.el7 base 164 k libXau x86_64 1.0.8-2.1.el7 base 29 k libarchive x86_64 3.1.2-10.el7_2 base 318 k libedit x86_64 3.0-12.20121213cvs.el7 base 92 k libevent x86_64 2.0.21-4.el7 base 214 k libfabric x86_64 1.5.3-1.el7 base 445 k libgfortran x86_64 4.8.5-28.el7_5.1 updates 299 k libibumad x86_64 15-7.el7_5 updates 22 k libibverbs x86_64 15-7.el7_5 updates 224 k libjpeg-turbo x86_64 1.2.90-5.el7 base 134 k libmnl x86_64 1.0.3-7.el7 base 23 k libnetfilter_conntrack x86_64 1.0.6-1.el7_3 base 55 k libnfnetlink x86_64 1.0.1-4.el7 base 26 k libnl3 x86_64 3.2.28-4.el7 base 278 k libpng x86_64 2:1.5.13-7.el7_2 base 213 k libpsm2 x86_64 10.3.8-3.el7 base 180 k libquadmath x86_64 4.8.5-28.el7_5.1 updates 188 k libquadmath-devel x86_64 4.8.5-28.el7_5.1 updates 51 k librdmacm x86_64 15-7.el7_5 updates 61 k libtool-ltdl x86_64 2.4.2-22.el7_3 base 49 k libuv x86_64 1:1.23.2-1.el7 epel 129 k libxcb x86_64 1.12-1.el7 base 211 k lua-bitop x86_64 1.0.2-3.el7 epel 7.9 k lua-filesystem x86_64 1.6.2-2.el7 epel 28 k lua-json noarch 1.3.2-2.el7 epel 23 k lua-lpeg x86_64 0.12-1.el7 epel 59 k lua-posix x86_64 32-2.el7 epel 116 k lua-term x86_64 0.03-3.el7 epel 10 k lzo x86_64 2.06-8.el7 base 59 k m4 x86_64 1.4.16-10.el7 base 256 k mpich-3.0 x86_64 3.0.4-10.el7 base 1.0 M munge x86_64 0.5.11-3.el7 epel 95 k munge-libs x86_64 0.5.11-3.el7 epel 37 k numactl-libs x86_64 2.0.9-7.el7 base 29 k ocl-icd x86_64 2.2.12-1.el7 epel 43 k openblas x86_64 0.3.3-2.el7 epel 27 k openblas-openmp x86_64 0.3.3-2.el7 epel 4.4 M openblas-openmp64 x86_64 0.3.3-2.el7 epel 4.3 M openblas-openmp64_ x86_64 0.3.3-2.el7 epel 4.3 M openblas-serial x86_64 0.3.3-2.el7 epel 4.3 M openblas-serial64 x86_64 0.3.3-2.el7 epel 4.2 M openblas-serial64_ x86_64 0.3.3-2.el7 epel 4.2 M openblas-threads x86_64 0.3.3-2.el7 epel 4.4 M openblas-threads64 x86_64 0.3.3-2.el7 epel 4.3 M openblas-threads64_ x86_64 0.3.3-2.el7 epel 4.3 M openmpi x86_64 4.0.0-1.el7 copr_base 2.6 M opensm-libs x86_64 3.3.20-2.el7 base 66 k openssh x86_64 7.4p1-16.el7 base 510 k openssh-clients x86_64 7.4p1-16.el7 base 655 k pciutils x86_64 3.5.1-3.el7 base 93 k pciutils-libs x86_64 3.5.1-3.el7 base 46 k perl-Data-Dumper x86_64 2.145-3.el7 base 47 k perl-Test-Harness noarch 3.28-3.el7 base 302 k pmix x86_64 3.0.2-1.el7 copr_base 668 k python x86_64 2.7.5-69.el7_5 updates 93 k python3-rpm-macros noarch 3-22.el7 epel 6.6 k python34 x86_64 3.4.9-1.el7 epel 51 k python34-libs x86_64 3.4.9-1.el7 epel 8.3 M rdma-core x86_64 15-7.el7_5 updates 48 k rhash x86_64 1.3.4-2.el7 epel 118 k rpm-mpi-hooks noarch 5-4.el7 copr_base 7.7 k sysvinit-tools x86_64 2.88-14.dsf.el7 base 63 k tcl x86_64 1:8.5.13-8.el7 base 1.9 M torque x86_64 4.2.10-10.el7 epel 83 k torque-libs x86_64 4.2.10-10.el7 epel 130 k ucx x86_64 1.4.0-1.el7 epel 388 k voro++ x86_64 0.4.6-7.el7 epel 152 k Transaction Summary ================================================================================ Install 14 Packages (+92 Dependent packages) Total download size: 93 M Installed size: 496 M Downloading packages: (1/106): Lmod-6.6.3-1.el7.x86_64.rpm | 192 kB 00:00 (2/106): autoconf-2.69-11.el7.noarch.rpm | 701 kB 00:00 (3/106): automake-1.13.4-3.el7.noarch.rpm | 679 kB 00:00 (4/106): cmake3-data-3.12.2-1.el7.noarch.rpm | 1.3 MB 00:00 (5/106): cmake3-3.12.2-1.el7.x86_64.rpm | 7.4 MB 00:00 (6/106): emacs-filesystem-24.3-20.el7_4.noarch.rpm | 58 kB 00:00 (7/106): environment-modules-3.2.10-10.el7.x86_64.rpm | 107 kB 00:00 (8/106): fftw-3.3.3-8.el7.x86_64.rpm | 45 kB 00:00 (9/106): fftw-devel-3.3.3-8.el7.x86_64.rpm | 128 kB 00:00 (10/106): fftw-libs-3.3.3-8.el7.x86_64.rpm | 8.5 kB 00:00 (11/106): fftw-libs-double-3.3.3-8.el7.x86_64.rpm | 759 kB 00:00 (12/106): atlas-3.10.1-12.el7.x86_64.rpm | 4.5 MB 00:01 (13/106): fftw-libs-long-3.3.3-8.el7.x86_64.rpm | 495 kB 00:00 (14/106): fftw-libs-single-3.3.3-8.el7.x86_64.rpm | 766 kB 00:00 (15/106): fipscheck-1.4.1-6.el7.x86_64.rpm | 21 kB 00:00 (16/106): fipscheck-lib-1.4.1-6.el7.x86_64.rpm | 11 kB 00:00 (17/106): gsl-devel-1.15-13.el7.x86_64.rpm | 446 kB 00:00 (18/106): gsl-1.15-13.el7.x86_64.rpm | 884 kB 00:00 (19/106): hostname-3.13-3.el7.x86_64.rpm | 17 kB 00:00 (20/106): gcc-gfortran-4.8.5-28.el7_5.1.x86_64.rpm | 6.7 MB 00:00 (21/106): hwloc-libs-1.11.8-4.el7.x86_64.rpm | 1.6 MB 00:00 (22/106): initscripts-9.49.41-1.el7_5.2.x86_64.rpm | 437 kB 00:00 (23/106): infinipath-psm-3.3-26_g604758e_open.2.el7.x86_64. | 186 kB 00:00 (24/106): iptables-1.4.21-24.1.el7_5.x86_64.rpm | 432 kB 00:00 (25/106): hwdata-0.252-8.8.el7.x86_64.rpm | 2.3 MB 00:00 (26/106): iproute-4.11.0-14.el7.x86_64.rpm | 763 kB 00:00 (27/106): jsoncpp-0.10.5-2.el7.x86_64.rpm | 82 kB 00:00 (28/106): iputils-20160308-10.el7.x86_64.rpm | 148 kB 00:00 (29/106): libX11-common-1.6.5-1.el7.noarch.rpm | 164 kB 00:00 (30/106): libX11-1.6.5-1.el7.x86_64.rpm | 606 kB 00:00 (31/106): libXau-1.0.8-2.1.el7.x86_64.rpm | 29 kB 00:00 (32/106): libarchive-3.1.2-10.el7_2.x86_64.rpm | 318 kB 00:00 (33/106): libedit-3.0-12.20121213cvs.el7.x86_64.rpm | 92 kB 00:00 (34/106): libgfortran-4.8.5-28.el7_5.1.x86_64.rpm | 299 kB 00:00 (35/106): libibverbs-15-7.el7_5.x86_64.rpm | 224 kB 00:00 (36/106): libevent-2.0.21-4.el7.x86_64.rpm | 214 kB 00:00 (37/106): libfabric-1.5.3-1.el7.x86_64.rpm | 445 kB 00:00 (38/106): libibumad-15-7.el7_5.x86_64.rpm | 22 kB 00:00 (39/106): libjpeg-turbo-1.2.90-5.el7.x86_64.rpm | 134 kB 00:00 (40/106): libjpeg-turbo-devel-1.2.90-5.el7.x86_64.rpm | 98 kB 00:00 (41/106): libmnl-1.0.3-7.el7.x86_64.rpm | 23 kB 00:00 (42/106): libnetfilter_conntrack-1.0.6-1.el7_3.x86_64.rpm | 55 kB 00:00 (43/106): libnfnetlink-1.0.1-4.el7.x86_64.rpm | 26 kB 00:00 (44/106): libnl3-3.2.28-4.el7.x86_64.rpm | 278 kB 00:00 (45/106): libpng-1.5.13-7.el7_2.x86_64.rpm | 213 kB 00:00 (46/106): libpng-devel-1.5.13-7.el7_2.x86_64.rpm | 122 kB 00:00 (47/106): libpsm2-10.3.8-3.el7.x86_64.rpm | 180 kB 00:00 (48/106): libquadmath-4.8.5-28.el7_5.1.x86_64.rpm | 188 kB 00:00 (49/106): librdmacm-15-7.el7_5.x86_64.rpm | 61 kB 00:00 (50/106): libuv-1.23.2-1.el7.x86_64.rpm | 129 kB 00:00 (51/106): lua-filesystem-1.6.2-2.el7.x86_64.rpm | 28 kB 00:00 (52/106): lua-json-1.3.2-2.el7.noarch.rpm | 23 kB 00:00 (53/106): lua-lpeg-0.12-1.el7.x86_64.rpm | 59 kB 00:00 (54/106): lua-posix-32-2.el7.x86_64.rpm | 116 kB 00:00 (55/106): lua-term-0.03-3.el7.x86_64.rpm | 10 kB 00:00 (56/106): libtool-ltdl-2.4.2-22.el7_3.x86_64.rpm | 49 kB 00:00 (57/106): libquadmath-devel-4.8.5-28.el7_5.1.x86_64.rpm | 51 kB 00:00 (58/106): lua-bitop-1.0.2-3.el7.x86_64.rpm | 7.9 kB 00:00 (59/106): lzo-2.06-8.el7.x86_64.rpm | 59 kB 00:00 (60/106): m4-1.4.16-10.el7.x86_64.rpm | 256 kB 00:00 (61/106): mpich-3.0-3.0.4-10.el7.x86_64.rpm | 1.0 MB 00:00 (62/106): munge-0.5.11-3.el7.x86_64.rpm | 95 kB 00:00 (63/106): libxcb-1.12-1.el7.x86_64.rpm | 211 kB 00:00 (64/106): ocl-icd-2.2.12-1.el7.x86_64.rpm | 43 kB 00:00 (65/106): mpich-3.0-devel-3.0.4-10.el7.x86_64.rpm | 103 kB 00:00 (66/106): ocl-icd-devel-2.2.12-1.el7.x86_64.rpm | 15 kB 00:00 (67/106): munge-libs-0.5.11-3.el7.x86_64.rpm | 37 kB 00:00 (68/106): openblas-0.3.3-2.el7.x86_64.rpm | 27 kB 00:00 (69/106): numactl-libs-2.0.9-7.el7.x86_64.rpm | 29 kB 00:00 (70/106): openblas-devel-0.3.3-2.el7.x86_64.rpm | 88 kB 00:00 (71/106): openblas-openmp-0.3.3-2.el7.x86_64.rpm | 4.4 MB 00:00 (72/106): openblas-openmp64-0.3.3-2.el7.x86_64.rpm | 4.3 MB 00:00 (73/106): openblas-openmp64_-0.3.3-2.el7.x86_64.rpm | 4.3 MB 00:00 (74/106): openblas-serial-0.3.3-2.el7.x86_64.rpm | 4.3 MB 00:00 (75/106): openblas-serial64-0.3.3-2.el7.x86_64.rpm | 4.2 MB 00:00 (76/106): openblas-serial64_-0.3.3-2.el7.x86_64.rpm | 4.2 MB 00:00 (77/106): openblas-threads-0.3.3-2.el7.x86_64.rpm | 4.4 MB 00:00 (78/106): openblas-threads64-0.3.3-2.el7.x86_64.rpm | 4.3 MB 00:00 (79/106): openblas-threads64_-0.3.3-2.el7.x86_64.rpm | 4.3 MB 00:00 (80/106): opencl-headers-2.2-1.20180306gite986688.el7.noarc | 84 kB 00:00 (81/106): opensm-libs-3.3.20-2.el7.x86_64.rpm | 66 kB 00:00 (82/106): openmpi-4.0.0-1.el7.x86_64.rpm | 2.6 MB 00:00 (83/106): openmpi-devel-4.0.0-1.el7.x86_64.rpm | 872 kB 00:00 (84/106): openssh-clients-7.4p1-16.el7.x86_64.rpm | 655 kB 00:00 (85/106): pciutils-3.5.1-3.el7.x86_64.rpm | 93 kB 00:00 (86/106): pciutils-libs-3.5.1-3.el7.x86_64.rpm | 46 kB 00:00 (87/106): perl-Data-Dumper-2.145-3.el7.x86_64.rpm | 47 kB 00:00 (88/106): pmix-3.0.2-1.el7.x86_64.rpm | 668 kB 00:00 (89/106): python3-rpm-macros-3-22.el7.noarch.rpm | 6.6 kB 00:00 (90/106): openssh-7.4p1-16.el7.x86_64.rpm | 510 kB 00:00 (91/106): python34-devel-3.4.9-1.el7.x86_64.rpm | 185 kB 00:00 (92/106): python-2.7.5-69.el7_5.x86_64.rpm | 93 kB 00:00 (93/106): perl-Test-Harness-3.28-3.el7.noarch.rpm | 302 kB 00:00 (94/106): python34-3.4.9-1.el7.x86_64.rpm | 51 kB 00:00 (95/106): rpm-mpi-hooks-5-4.el7.noarch.rpm | 7.7 kB 00:00 (96/106): rhash-1.3.4-2.el7.x86_64.rpm | 118 kB 00:00 (97/106): torque-4.2.10-10.el7.x86_64.rpm | 83 kB 00:00 (98/106): torque-libs-4.2.10-10.el7.x86_64.rpm | 130 kB 00:00 (99/106): sysvinit-tools-2.88-14.dsf.el7.x86_64.rpm | 63 kB 00:00 (100/106): ucx-1.4.0-1.el7.x86_64.rpm | 388 kB 00:00 (101/106): rdma-core-15-7.el7_5.x86_64.rpm | 48 kB 00:00 (102/106): python34-libs-3.4.9-1.el7.x86_64.rpm | 8.3 MB 00:00 (103/106): voro++-0.4.6-7.el7.x86_64.rpm | 152 kB 00:00 (104/106): voro++-devel-0.4.6-7.el7.x86_64.rpm | 32 kB 00:00 (105/106): zlib-devel-1.2.7-17.el7.x86_64.rpm | 50 kB 00:00 (106/106): tcl-8.5.13-8.el7.x86_64.rpm | 1.9 MB 00:00 -------------------------------------------------------------------------------- Total 14 MB/s | 93 MB 00:06 Running transaction check Running transaction test Transaction test succeeded Running transaction Installing : libquadmath-4.8.5-28.el7_5.1.x86_64 1/106 Installing : libgfortran-4.8.5-28.el7_5.1.x86_64 2/106 Installing : munge-libs-0.5.11-3.el7.x86_64 3/106 Installing : fipscheck-1.4.1-6.el7.x86_64 4/106 Installing : fipscheck-lib-1.4.1-6.el7.x86_64 5/106 Installing : fftw-libs-long-3.3.3-8.el7.x86_64 6/106 Installing : libevent-2.0.21-4.el7.x86_64 7/106 Installing : fftw-libs-single-3.3.3-8.el7.x86_64 8/106 Installing : numactl-libs-2.0.9-7.el7.x86_64 9/106 Installing : fftw-libs-double-3.3.3-8.el7.x86_64 10/106 Installing : libpsm2-10.3.8-3.el7.x86_64 11/106 Installing : munge-0.5.11-3.el7.x86_64 12/106 Installing : torque-libs-4.2.10-10.el7.x86_64 13/106 Installing : torque-4.2.10-10.el7.x86_64 14/106 Installing : python34-libs-3.4.9-1.el7.x86_64 15/106 Installing : python34-3.4.9-1.el7.x86_64 16/106 Installing : infinipath-psm-3.3-26_g604758e_open.2.el7.x86_64 17/106 Installing : libnl3-3.2.28-4.el7.x86_64 18/106 Installing : libmnl-1.0.3-7.el7.x86_64 19/106 Installing : python-2.7.5-69.el7_5.x86_64 20/106 Installing : libnfnetlink-1.0.1-4.el7.x86_64 21/106 Installing : 1:tcl-8.5.13-8.el7.x86_64 22/106 Installing : libnetfilter_conntrack-1.0.6-1.el7_3.x86_64 23/106 Installing : iptables-1.4.21-24.1.el7_5.x86_64 24/106 Installing : iproute-4.11.0-14.el7.x86_64 25/106 Installing : fftw-3.3.3-8.el7.x86_64 26/106 Installing : fftw-libs-3.3.3-8.el7.x86_64 27/106 Installing : openssh-7.4p1-16.el7.x86_64 28/106 Installing : openblas-serial64_-0.3.3-2.el7.x86_64 29/106 Installing : openblas-threads64_-0.3.3-2.el7.x86_64 30/106 Installing : atlas-3.10.1-12.el7.x86_64 31/106 Installing : gsl-1.15-13.el7.x86_64 32/106 Installing : openblas-threads64-0.3.3-2.el7.x86_64 33/106 Installing : openblas-openmp-0.3.3-2.el7.x86_64 34/106 Installing : openblas-threads-0.3.3-2.el7.x86_64 35/106 Installing : openblas-openmp64-0.3.3-2.el7.x86_64 36/106 Installing : openblas-openmp64_-0.3.3-2.el7.x86_64 37/106 Installing : openblas-serial64-0.3.3-2.el7.x86_64 38/106 Installing : openblas-serial-0.3.3-2.el7.x86_64 39/106 Installing : libquadmath-devel-4.8.5-28.el7_5.1.x86_64 40/106 Installing : gcc-gfortran-4.8.5-28.el7_5.1.x86_64 41/106 Installing : openblas-0.3.3-2.el7.x86_64 42/106 Installing : rhash-1.3.4-2.el7.x86_64 43/106 Installing : hwdata-0.252-8.8.el7.x86_64 44/106 Installing : lua-filesystem-1.6.2-2.el7.x86_64 45/106 Installing : pciutils-libs-3.5.1-3.el7.x86_64 46/106 Installing : pciutils-3.5.1-3.el7.x86_64 47/106 Installing : ocl-icd-2.2.12-1.el7.x86_64 48/106 Installing : libX11-common-1.6.5-1.el7.noarch 49/106 Installing : hostname-3.13-3.el7.x86_64 50/106 Installing : lua-bitop-1.0.2-3.el7.x86_64 51/106 Installing : lua-posix-32-2.el7.x86_64 52/106 Installing : perl-Test-Harness-3.28-3.el7.noarch 53/106 Installing : python3-rpm-macros-3-22.el7.noarch 54/106 Installing : m4-1.4.16-10.el7.x86_64 55/106 Installing : lzo-2.06-8.el7.x86_64 56/106 Installing : libarchive-3.1.2-10.el7_2.x86_64 57/106 Installing : libjpeg-turbo-1.2.90-5.el7.x86_64 58/106 Installing : lua-lpeg-0.12-1.el7.x86_64 59/106 Installing : lua-json-1.3.2-2.el7.noarch 60/106 Installing : opencl-headers-2.2-1.20180306gite986688.el7.noarch 61/106 Installing : iputils-20160308-10.el7.x86_64 62/106 Installing : libedit-3.0-12.20121213cvs.el7.x86_64 63/106 Installing : openssh-clients-7.4p1-16.el7.x86_64 64/106 Installing : lua-term-0.03-3.el7.x86_64 65/106 Installing : Lmod-6.6.3-1.el7.x86_64 66/106 Installing : rpm-mpi-hooks-5-4.el7.noarch 67/106 Installing : voro++-0.4.6-7.el7.x86_64 68/106 Installing : libXau-1.0.8-2.1.el7.x86_64 69/106 Installing : libxcb-1.12-1.el7.x86_64 70/106 Installing : libX11-1.6.5-1.el7.x86_64 71/106 Installing : environment-modules-3.2.10-10.el7.x86_64 72/106 Installing : jsoncpp-0.10.5-2.el7.x86_64 73/106 Installing : 1:emacs-filesystem-24.3-20.el7_4.noarch 74/106 Installing : perl-Data-Dumper-2.145-3.el7.x86_64 75/106 Installing : autoconf-2.69-11.el7.noarch 76/106 Installing : automake-1.13.4-3.el7.noarch 77/106 Installing : 1:libuv-1.23.2-1.el7.x86_64 78/106 Installing : cmake3-3.12.2-1.el7.x86_64 79/106 Installing : cmake3-data-3.12.2-1.el7.noarch 80/106 Installing : libtool-ltdl-2.4.2-22.el7_3.x86_64 81/106 Installing : hwloc-libs-1.11.8-4.el7.x86_64 82/106 Installing : pmix-3.0.2-1.el7.x86_64 83/106 Installing : mpich-3.0-3.0.4-10.el7.x86_64 84/106 Installing : sysvinit-tools-2.88-14.dsf.el7.x86_64 85/106 Installing : initscripts-9.49.41-1.el7_5.2.x86_64 86/106 Installing : rdma-core-15-7.el7_5.x86_64 87/106 Installing : libibverbs-15-7.el7_5.x86_64 88/106 Installing : librdmacm-15-7.el7_5.x86_64 89/106 Installing : ucx-1.4.0-1.el7.x86_64 90/106 Installing : libfabric-1.5.3-1.el7.x86_64 91/106 Installing : libibumad-15-7.el7_5.x86_64 92/106 Installing : opensm-libs-3.3.20-2.el7.x86_64 93/106 Installing : openmpi-4.0.0-1.el7.x86_64 94/106 Installing : 2:libpng-1.5.13-7.el7_2.x86_64 95/106 Installing : zlib-devel-1.2.7-17.el7.x86_64 96/106 Installing : 2:libpng-devel-1.5.13-7.el7_2.x86_64 97/106 Installing : openmpi-devel-4.0.0-1.el7.x86_64 98/106 Installing : mpich-3.0-devel-3.0.4-10.el7.x86_64 99/106 Installing : gsl-devel-1.15-13.el7.x86_64 100/106 Installing : voro++-devel-0.4.6-7.el7.x86_64 101/106 Installing : ocl-icd-devel-2.2.12-1.el7.x86_64 102/106 Installing : libjpeg-turbo-devel-1.2.90-5.el7.x86_64 103/106 Installing : python34-devel-3.4.9-1.el7.x86_64 104/106 Installing : openblas-devel-0.3.3-2.el7.x86_64 105/106 Installing : fftw-devel-3.3.3-8.el7.x86_64 106/106 Verifying : fipscheck-lib-1.4.1-6.el7.x86_64 1/106 Verifying : zlib-devel-1.2.7-17.el7.x86_64 2/106 Verifying : 1:tcl-8.5.13-8.el7.x86_64 3/106 Verifying : environment-modules-3.2.10-10.el7.x86_64 4/106 Verifying : cmake3-data-3.12.2-1.el7.noarch 5/106 Verifying : rdma-core-15-7.el7_5.x86_64 6/106 Verifying : fftw-3.3.3-8.el7.x86_64 7/106 Verifying : 2:libpng-1.5.13-7.el7_2.x86_64 8/106 Verifying : sysvinit-tools-2.88-14.dsf.el7.x86_64 9/106 Verifying : fftw-libs-double-3.3.3-8.el7.x86_64 10/106 Verifying : libtool-ltdl-2.4.2-22.el7_3.x86_64 11/106 Verifying : pmix-3.0.2-1.el7.x86_64 12/106 Verifying : libgfortran-4.8.5-28.el7_5.1.x86_64 13/106 Verifying : openblas-serial64_-0.3.3-2.el7.x86_64 14/106 Verifying : 1:libuv-1.23.2-1.el7.x86_64 15/106 Verifying : libquadmath-devel-4.8.5-28.el7_5.1.x86_64 16/106 Verifying : perl-Data-Dumper-2.145-3.el7.x86_64 17/106 Verifying : fipscheck-1.4.1-6.el7.x86_64 18/106 Verifying : openblas-threads64_-0.3.3-2.el7.x86_64 19/106 Verifying : iptables-1.4.21-24.1.el7_5.x86_64 20/106 Verifying : munge-0.5.11-3.el7.x86_64 21/106 Verifying : 1:emacs-filesystem-24.3-20.el7_4.noarch 22/106 Verifying : libnfnetlink-1.0.1-4.el7.x86_64 23/106 Verifying : jsoncpp-0.10.5-2.el7.x86_64 24/106 Verifying : openssh-7.4p1-16.el7.x86_64 25/106 Verifying : autoconf-2.69-11.el7.noarch 26/106 Verifying : libXau-1.0.8-2.1.el7.x86_64 27/106 Verifying : voro++-0.4.6-7.el7.x86_64 28/106 Verifying : pciutils-3.5.1-3.el7.x86_64 29/106 Verifying : libX11-1.6.5-1.el7.x86_64 30/106 Verifying : lua-term-0.03-3.el7.x86_64 31/106 Verifying : libedit-3.0-12.20121213cvs.el7.x86_64 32/106 Verifying : mpich-3.0-3.0.4-10.el7.x86_64 33/106 Verifying : openblas-devel-0.3.3-2.el7.x86_64 34/106 Verifying : automake-1.13.4-3.el7.noarch 35/106 Verifying : iproute-4.11.0-14.el7.x86_64 36/106 Verifying : atlas-3.10.1-12.el7.x86_64 37/106 Verifying : openblas-threads64-0.3.3-2.el7.x86_64 38/106 Verifying : ucx-1.4.0-1.el7.x86_64 39/106 Verifying : torque-libs-4.2.10-10.el7.x86_64 40/106 Verifying : libjpeg-turbo-devel-1.2.90-5.el7.x86_64 41/106 Verifying : openblas-openmp-0.3.3-2.el7.x86_64 42/106 Verifying : openblas-threads-0.3.3-2.el7.x86_64 43/106 Verifying : libxcb-1.12-1.el7.x86_64 44/106 Verifying : rpm-mpi-hooks-5-4.el7.noarch 45/106 Verifying : iputils-20160308-10.el7.x86_64 46/106 Verifying : opencl-headers-2.2-1.20180306gite986688.el7.noarch 47/106 Verifying : python-2.7.5-69.el7_5.x86_64 48/106 Verifying : lua-lpeg-0.12-1.el7.x86_64 49/106 Verifying : ocl-icd-devel-2.2.12-1.el7.x86_64 50/106 Verifying : hwloc-libs-1.11.8-4.el7.x86_64 51/106 Verifying : lua-posix-32-2.el7.x86_64 52/106 Verifying : libmnl-1.0.3-7.el7.x86_64 53/106 Verifying : libjpeg-turbo-1.2.90-5.el7.x86_64 54/106 Verifying : python34-3.4.9-1.el7.x86_64 55/106 Verifying : lzo-2.06-8.el7.x86_64 56/106 Verifying : m4-1.4.16-10.el7.x86_64 57/106 Verifying : python3-rpm-macros-3-22.el7.noarch 58/106 Verifying : perl-Test-Harness-3.28-3.el7.noarch 59/106 Verifying : munge-libs-0.5.11-3.el7.x86_64 60/106 Verifying : lua-bitop-1.0.2-3.el7.x86_64 61/106 Verifying : torque-4.2.10-10.el7.x86_64 62/106 Verifying : gcc-gfortran-4.8.5-28.el7_5.1.x86_64 63/106 Verifying : openblas-openmp64-0.3.3-2.el7.x86_64 64/106 Verifying : gsl-1.15-13.el7.x86_64 65/106 Verifying : numactl-libs-2.0.9-7.el7.x86_64 66/106 Verifying : gsl-devel-1.15-13.el7.x86_64 67/106 Verifying : openblas-openmp64_-0.3.3-2.el7.x86_64 68/106 Verifying : fftw-libs-single-3.3.3-8.el7.x86_64 69/106 Verifying : libevent-2.0.21-4.el7.x86_64 70/106 Verifying : lua-json-1.3.2-2.el7.noarch 71/106 Verifying : python34-libs-3.4.9-1.el7.x86_64 72/106 Verifying : openblas-serial64-0.3.3-2.el7.x86_64 73/106 Verifying : libquadmath-4.8.5-28.el7_5.1.x86_64 74/106 Verifying : hostname-3.13-3.el7.x86_64 75/106 Verifying : libX11-common-1.6.5-1.el7.noarch 76/106 Verifying : voro++-devel-0.4.6-7.el7.x86_64 77/106 Verifying : libnl3-3.2.28-4.el7.x86_64 78/106 Verifying : openssh-clients-7.4p1-16.el7.x86_64 79/106 Verifying : libnetfilter_conntrack-1.0.6-1.el7_3.x86_64 80/106 Verifying : ocl-icd-2.2.12-1.el7.x86_64 81/106 Verifying : cmake3-3.12.2-1.el7.x86_64 82/106 Verifying : fftw-libs-long-3.3.3-8.el7.x86_64 83/106 Verifying : libpsm2-10.3.8-3.el7.x86_64 84/106 Verifying : python34-devel-3.4.9-1.el7.x86_64 85/106 Verifying : pciutils-libs-3.5.1-3.el7.x86_64 86/106 Verifying : openmpi-devel-4.0.0-1.el7.x86_64 87/106 Verifying : opensm-libs-3.3.20-2.el7.x86_64 88/106 Verifying : openblas-serial-0.3.3-2.el7.x86_64 89/106 Verifying : initscripts-9.49.41-1.el7_5.2.x86_64 90/106 Verifying : librdmacm-15-7.el7_5.x86_64 91/106 Verifying : lua-filesystem-1.6.2-2.el7.x86_64 92/106 Verifying : 2:libpng-devel-1.5.13-7.el7_2.x86_64 93/106 Verifying : fftw-devel-3.3.3-8.el7.x86_64 94/106 Verifying : libibverbs-15-7.el7_5.x86_64 95/106 Verifying : Lmod-6.6.3-1.el7.x86_64 96/106 Verifying : fftw-libs-3.3.3-8.el7.x86_64 97/106 Verifying : openmpi-4.0.0-1.el7.x86_64 98/106 Verifying : infinipath-psm-3.3-26_g604758e_open.2.el7.x86_64 99/106 Verifying : mpich-3.0-devel-3.0.4-10.el7.x86_64 100/106 Verifying : hwdata-0.252-8.8.el7.x86_64 101/106 Verifying : libfabric-1.5.3-1.el7.x86_64 102/106 Verifying : libarchive-3.1.2-10.el7_2.x86_64 103/106 Verifying : rhash-1.3.4-2.el7.x86_64 104/106 Verifying : libibumad-15-7.el7_5.x86_64 105/106 Verifying : openblas-0.3.3-2.el7.x86_64 106/106 Installed: cmake3.x86_64 0:3.12.2-1.el7 fftw-devel.x86_64 0:3.3.3-8.el7 gcc-gfortran.x86_64 0:4.8.5-28.el7_5.1 gsl-devel.x86_64 0:1.15-13.el7 libjpeg-turbo-devel.x86_64 0:1.2.90-5.el7 libpng-devel.x86_64 2:1.5.13-7.el7_2 mpich-3.0-devel.x86_64 0:3.0.4-10.el7 ocl-icd-devel.x86_64 0:2.2.12-1.el7 openblas-devel.x86_64 0:0.3.3-2.el7 opencl-headers.noarch 0:2.2-1.20180306gite986688.el7 openmpi-devel.x86_64 0:4.0.0-1.el7 python34-devel.x86_64 0:3.4.9-1.el7 voro++-devel.x86_64 0:0.4.6-7.el7 zlib-devel.x86_64 0:1.2.7-17.el7 Dependency Installed: Lmod.x86_64 0:6.6.3-1.el7 atlas.x86_64 0:3.10.1-12.el7 autoconf.noarch 0:2.69-11.el7 automake.noarch 0:1.13.4-3.el7 cmake3-data.noarch 0:3.12.2-1.el7 emacs-filesystem.noarch 1:24.3-20.el7_4 environment-modules.x86_64 0:3.2.10-10.el7 fftw.x86_64 0:3.3.3-8.el7 fftw-libs.x86_64 0:3.3.3-8.el7 fftw-libs-double.x86_64 0:3.3.3-8.el7 fftw-libs-long.x86_64 0:3.3.3-8.el7 fftw-libs-single.x86_64 0:3.3.3-8.el7 fipscheck.x86_64 0:1.4.1-6.el7 fipscheck-lib.x86_64 0:1.4.1-6.el7 gsl.x86_64 0:1.15-13.el7 hostname.x86_64 0:3.13-3.el7 hwdata.x86_64 0:0.252-8.8.el7 hwloc-libs.x86_64 0:1.11.8-4.el7 infinipath-psm.x86_64 0:3.3-26_g604758e_open.2.el7 initscripts.x86_64 0:9.49.41-1.el7_5.2 iproute.x86_64 0:4.11.0-14.el7 iptables.x86_64 0:1.4.21-24.1.el7_5 iputils.x86_64 0:20160308-10.el7 jsoncpp.x86_64 0:0.10.5-2.el7 libX11.x86_64 0:1.6.5-1.el7 libX11-common.noarch 0:1.6.5-1.el7 libXau.x86_64 0:1.0.8-2.1.el7 libarchive.x86_64 0:3.1.2-10.el7_2 libedit.x86_64 0:3.0-12.20121213cvs.el7 libevent.x86_64 0:2.0.21-4.el7 libfabric.x86_64 0:1.5.3-1.el7 libgfortran.x86_64 0:4.8.5-28.el7_5.1 libibumad.x86_64 0:15-7.el7_5 libibverbs.x86_64 0:15-7.el7_5 libjpeg-turbo.x86_64 0:1.2.90-5.el7 libmnl.x86_64 0:1.0.3-7.el7 libnetfilter_conntrack.x86_64 0:1.0.6-1.el7_3 libnfnetlink.x86_64 0:1.0.1-4.el7 libnl3.x86_64 0:3.2.28-4.el7 libpng.x86_64 2:1.5.13-7.el7_2 libpsm2.x86_64 0:10.3.8-3.el7 libquadmath.x86_64 0:4.8.5-28.el7_5.1 libquadmath-devel.x86_64 0:4.8.5-28.el7_5.1 librdmacm.x86_64 0:15-7.el7_5 libtool-ltdl.x86_64 0:2.4.2-22.el7_3 libuv.x86_64 1:1.23.2-1.el7 libxcb.x86_64 0:1.12-1.el7 lua-bitop.x86_64 0:1.0.2-3.el7 lua-filesystem.x86_64 0:1.6.2-2.el7 lua-json.noarch 0:1.3.2-2.el7 lua-lpeg.x86_64 0:0.12-1.el7 lua-posix.x86_64 0:32-2.el7 lua-term.x86_64 0:0.03-3.el7 lzo.x86_64 0:2.06-8.el7 m4.x86_64 0:1.4.16-10.el7 mpich-3.0.x86_64 0:3.0.4-10.el7 munge.x86_64 0:0.5.11-3.el7 munge-libs.x86_64 0:0.5.11-3.el7 numactl-libs.x86_64 0:2.0.9-7.el7 ocl-icd.x86_64 0:2.2.12-1.el7 openblas.x86_64 0:0.3.3-2.el7 openblas-openmp.x86_64 0:0.3.3-2.el7 openblas-openmp64.x86_64 0:0.3.3-2.el7 openblas-openmp64_.x86_64 0:0.3.3-2.el7 openblas-serial.x86_64 0:0.3.3-2.el7 openblas-serial64.x86_64 0:0.3.3-2.el7 openblas-serial64_.x86_64 0:0.3.3-2.el7 openblas-threads.x86_64 0:0.3.3-2.el7 openblas-threads64.x86_64 0:0.3.3-2.el7 openblas-threads64_.x86_64 0:0.3.3-2.el7 openmpi.x86_64 0:4.0.0-1.el7 opensm-libs.x86_64 0:3.3.20-2.el7 openssh.x86_64 0:7.4p1-16.el7 openssh-clients.x86_64 0:7.4p1-16.el7 pciutils.x86_64 0:3.5.1-3.el7 pciutils-libs.x86_64 0:3.5.1-3.el7 perl-Data-Dumper.x86_64 0:2.145-3.el7 perl-Test-Harness.noarch 0:3.28-3.el7 pmix.x86_64 0:3.0.2-1.el7 python.x86_64 0:2.7.5-69.el7_5 python3-rpm-macros.noarch 0:3-22.el7 python34.x86_64 0:3.4.9-1.el7 python34-libs.x86_64 0:3.4.9-1.el7 rdma-core.x86_64 0:15-7.el7_5 rhash.x86_64 0:1.3.4-2.el7 rpm-mpi-hooks.noarch 0:5-4.el7 sysvinit-tools.x86_64 0:2.88-14.dsf.el7 tcl.x86_64 1:8.5.13-8.el7 torque.x86_64 0:4.2.10-10.el7 torque-libs.x86_64 0:4.2.10-10.el7 ucx.x86_64 0:1.4.0-1.el7 voro++.x86_64 0:0.4.6-7.el7 Complete! Finish: build setup for lammps-20180822-3.el7.src.rpm Start: rpmbuild lammps-20180822-3.el7.src.rpm warning: bogus date in %changelog: Wed Aug 24 2018 Christoph Junghans - 20180822-2 Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.OwbIjT + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf lammps-stable_22Aug2018 + /usr/bin/gzip -dc /builddir/build/SOURCES/lammps-stable_22Aug2018.tar.gz + /usr/bin/tar -xf - + STATUS=0 + '[' 0 -ne 0 ']' + cd lammps-stable_22Aug2018 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.SZaHLG + umask 022 + cd /builddir/build/BUILD + cd lammps-stable_22Aug2018 + mkdir -p serial mpich openmpi + cd openmpi + . /etc/profile.d/modules.sh ++++ /bin/ps -p 70 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' '' = '' ']' +++ LOADEDMODULES= +++ export LOADEDMODULES +++ '[' /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core = '' ']' + module load mpi/openmpi-x86_64 ++ /usr/bin/modulecmd sh load mpi/openmpi-x86_64 + eval LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/openmpi-x86_64' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man::' ';export' 'MANPATH;MPI_BIN=/usr/lib64/openmpi/bin' ';export' 'MPI_BIN;MPI_COMPILER=openmpi-x86_64' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib64/openmpi' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/openmpi-x86_64' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib64/openmpi/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/openmpi-x86_64' ';export' 'MPI_MAN;MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi' ';export' 'MPI_PYTHON2_SITEARCH;MPI_PYTHON3_SITEARCH=/usr/lib64/python3.4/site-packages/openmpi' ';export' 'MPI_PYTHON3_SITEARCH;MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_openmpi' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/openmpi-x86_64' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig:/usr/lib64/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64' ';export' '_LMFILES_;' ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ LOADEDMODULES=mpi/openmpi-x86_64 ++ export LOADEDMODULES ++ MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man:: ++ export MANPATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ MPI_COMPILER=openmpi-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/openmpi-x86_64 ++ export MPI_MAN ++ MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi ++ export MPI_PYTHON2_SITEARCH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.4/site-packages/openmpi ++ export MPI_PYTHON3_SITEARCH ++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 ++ export MPI_SYSCONFIG ++ PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64 ++ export _LMFILES_ + CFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro ' + export LDFLAGS + /usr/bin/cmake3 -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -C ../cmake/presets/std_nolib.cmake -DBUILD_LIB=ON -DLIB_SUFFIX= -DPKG_PYTHON=ON -DPKG_VORONOI=ON -DPKG_USER-ATC=ON -DPKG_USER-OMP=ON -DENABLE_TESTING=ON -DPYTHON_INSTDIR=/usr/lib/python3.4/site-packages -DCMAKE_INSTALL_SYSCONFDIR=/etc -DPKG_GPU=1 -DGPU_API=OpenCL -DFFT=FFTW3 -DBUILD_MPI=ON -DPKG_MPIIO=ON -DCMAKE_INSTALL_BINDIR=/usr/lib64/openmpi/bin -DCMAKE_INSTALL_LIBDIR=/usr/lib64/openmpi/lib '-DCMAKE_EXE_LINKER_FLAGS=-Wl,-z,relro -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags' '-DCMAKE_SHARED_LINKER_FLAGS=-Wl,-z,relro -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags' ../cmake loading initial cache file ../cmake/presets/std_nolib.cmake -- The CXX compiler identification is GNU 4.8.5 -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Running check for auto-generated files from make-based build system -- Found MPI_CXX: /usr/lib64/openmpi/lib/libmpi_cxx.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Found OpenMP_CXX: -fopenmp (found version "3.1") -- Found OpenMP: TRUE (found version "3.1") -- Found PkgConfig: /usr/bin/pkg-config (found version "0.27.1") -- Checking for module 'fftw3' -- Found fftw3, version 3.3.3 -- Found FFTW3: /usr/lib64/libfftw3.so -- Looking for sgemm_ -- Looking for sgemm_ - found -- Looking for C++ include pthread.h -- Looking for C++ include pthread.h - found -- Looking for pthread_create -- Looking for pthread_create - found -- Found Threads: TRUE -- Found BLAS: /usr/lib64/libopenblas.so -- Looking for cheev_ -- Looking for cheev_ - found -- A library with LAPACK API found. -- Found PythonInterp: /usr/bin/python (found version "2.7.5") -- Found PythonLibs: /usr/lib64/libpython3.4m.so (found version "3.4.9") -- Found JPEG: /usr/lib64/libjpeg.so (found version "62") -- Found PNG: /usr/lib64/libpng.so (found version "1.5.13") -- Found ZLIB: /usr/lib64/libz.so (found version "1.2.7") -- Found GZIP: /usr/bin/gzip -- Could NOT find FFMPEG (missing: FFMPEG_EXECUTABLE) -- Found VORO: /usr/lib64/libvoro++.so -- Looking for C++ include math.h -- Looking for C++ include math.h - found -- Looking for CL_VERSION_2_2 -- Looking for CL_VERSION_2_2 - found -- Found OpenCL: /usr/lib64/libOpenCL.so (found version "2.2") Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/atom_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/beck_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/born_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/born_coul_long_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/born_coul_long_cs_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/born_coul_wolf_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/born_coul_wolf_cs_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/buck_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/buck_coul_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/buck_coul_long_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/charmm_long_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/colloid_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/coul_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/coul_debye_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/coul_dsf_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/coul_long_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/coul_long_cs_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/device_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/dipole_lj_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/dipole_lj_sf_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/dipole_long_lj_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/dpd_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/eam_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/ellipsoid_nbor_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/gauss_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/lj_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/lj96_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/lj_class2_long_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/lj_coul_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/lj_coul_debye_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/lj_coul_long_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/lj_coul_msm_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/lj_cubic_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/lj_dsf_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/lj_expand_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/lj_expand_coul_long_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/lj_gromacs_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/lj_sdk_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/lj_sdk_long_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/mie_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/morse_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/neighbor_cpu_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/neighbor_gpu_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/pppm_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/re_squared_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/re_squared_lj_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/soft_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/sw_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/table_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/tersoff_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/tersoff_mod_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/tersoff_zbl_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/ufm_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/vashishta_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/yukawa_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/yukawa_colloid_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/zbl_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/gayberne_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu/gayberne_lj_cl.h... -- Generating style_angle.h... -- Generating style_atom.h... -- Generating style_body.h... -- Generating style_bond.h... -- Generating style_command.h... -- Generating style_compute.h... -- Generating style_dihedral.h... -- Generating style_dump.h... -- Generating style_fix.h... -- Generating style_improper.h... -- Generating style_integrate.h... -- Generating style_kspace.h... -- Generating style_minimize.h... -- Generating style_nbin.h... -- Generating style_npair.h... -- Generating style_nstencil.h... -- Generating style_ntopo.h... -- Generating style_pair.h... -- Generating style_reader.h... -- Generating style_region.h... -- Generating lmpinstalledpkgs.h... -- Building package: ASPHERE -- Building package: BODY -- Building package: CLASS2 -- Building package: COLLOID -- Building package: DIPOLE -- Building package: GRANULAR -- Building package: KSPACE -- Building package: MANYBODY -- Building package: MC -- Building package: MISC -- Building package: MOLECULE -- Building package: PERI -- Building package: REPLICA -- Building package: RIGID -- Building package: SHOCK -- Building package: SNAP -- Building package: SRD -- Building package: PYTHON -- Building package: MPIIO -- Building package: VORONOI -- Building package: USER-ATC -- Building package: USER-OMP -- Building package: OPT -- Building package: GPU -- The following packages have been found: * MPI * OpenMP * PkgConfig * FFTW3 * BLAS * Threads * LAPACK * PythonInterp * PythonLibs * JPEG * PNG * ZLIB * VORO * OpenCL -- <<< Build configuration >>> Build type Install path /usr Compilers and Flags: C++ Compiler /usr/bin/c++ Type GNU Version 4.8.5 C++ Flags -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp Defines LAMMPS_SMALLBIG;LAMMPS_MEMALIGN=64;FFT_FFTW;LMP_PYTHON;LAMMPS_JPEG;LAMMPS_PNG;LAMMPS_GZIP -- Linker flags: Executable -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -- Shared libraries -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -- Link libraries: /usr/lib64/openmpi/lib/libmpi_cxx.so;/usr/lib64/openmpi/lib/libmpi.so;/usr/lib64/libfftw3.so;/usr/lib64/libpython3.4m.so;/usr/lib64/libjpeg.so;/usr/lib64/libpng.so;/usr/lib64/libz.so;/usr/lib64/libvoro++.so;m;atc;gpu -- Using mpi with headers in /usr/include/openmpi-x86_64 and /usr/lib64/openmpi/lib/libmpi_cxx.so;/usr/lib64/openmpi/lib/libmpi.so -- GPU Api: OPENCL -- OCL Tune: GENERIC -- GPU Precision: MIXED -- Using FFTW3 as FFT -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_CXX_FLAGS_RELEASE CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE INCLUDE_INSTALL_DIR LIB_INSTALL_DIR SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi + /usr/bin/make -j2 /usr/bin/cmake3 -H/builddir/build/BUILD/lammps-stable_22Aug2018/cmake -B/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake3 -E cmake_progress_start /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/CMakeFiles /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[1]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' /usr/bin/make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/depend /usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' cd /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake --color= make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' cd /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/CMakeFiles/atc.dir/DependInfo.cmake --color= Scanning dependencies of target ocl_get_devices make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' /usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' [ 0%] Building CXX object CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ucl_get_devices.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DUCL_OPENCL -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIE -o CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ucl_get_devices.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ucl_get_devices.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ucl_get_devices.cpp:25:0: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 1%] Linking CXX executable ocl_get_devices /usr/bin/cmake3 -E cmake_link_script CMakeFiles/ocl_get_devices.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -rdynamic CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ucl_get_devices.cpp.o -o ocl_get_devices -lOpenCL make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' [ 1%] Built target ocl_get_devices /usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' cd /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/CMakeFiles/gpu.dir/DependInfo.cmake --color= Scanning dependencies of target atc make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' /usr/bin/make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' [ 1%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Coupling.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Coupling.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Coupling.cpp Scanning dependencies of target gpu make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' /usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' [ 1%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp: In member function 'double LAMMPS_AL::Answer::energy_virial(double*, double**, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp:182:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses] if (_ef_atom) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp:196:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses] if (_vf_atom) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp: In member function 'double LAMMPS_AL::Answer::energy_virial(double*, double**, double*, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp:231:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses] if (_ef_atom) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp:250:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses] if (_vf_atom) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp: In instantiation of 'double LAMMPS_AL::Answer::energy_virial(double*, double**, double*, double&) [with numtyp = float; acctyp = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp:313:16: required from here /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp:224:7: warning: unused variable 'ii' [-Wunused-variable] int ii, vstart=0, iend=_inum; ^ [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Coupling.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Coupling.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.cpp:17: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.cpp [ 2%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingEnergy.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingEnergy.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingEnergy.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.cpp:17: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dpd.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dpd.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dpd.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dpd.cpp:17: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.cpp [ 2%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMass.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMass.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMass.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck.cpp [ 2%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentum.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentum.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentum.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Coupling.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentum.h:7, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentum.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 3%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentumEnergy.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentumEnergy.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentumEnergy.cpp [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Coupling.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentumEnergy.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentumEnergy.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 3%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.cpp [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_ext.cpp [ 4%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Transfer.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Transfer.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Transfer.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Transfer.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Transfer.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 4%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferKernel.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferKernel.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferKernel.cpp [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Transfer.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferKernel.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferKernel.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 4%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferPartitionOfUnity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferPartitionOfUnity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferPartitionOfUnity.cpp [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Transfer.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferPartitionOfUnity.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferPartitionOfUnity.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 5%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomToMoleculeTransfer.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomToMoleculeTransfer.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomToMoleculeTransfer.cpp [ 5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.cpp [ 6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/BodyForce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/BodyForce.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/BodyForce.cpp [ 6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CBLattice.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CBLattice.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CBLattice.cpp [ 6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CauchyBorn.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CauchyBorn.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CauchyBorn.cpp [ 7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CbPotential.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CbPotential.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CbPotential.cpp [ 7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ChargeRegulator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ChargeRegulator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ChargeRegulator.cpp [ 7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dpd.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ChargeRegulator.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ChargeRegulator.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dpd.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.cpp [ 7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ConcentrationRegulator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ConcentrationRegulator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ConcentrationRegulator.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.cpp: In instantiation of 'void LAMMPS_AL::EAM::loop(bool, bool) [with numtyp = float; acctyp = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.cpp:533:16: required from here /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.cpp:448:14: warning: variable 'vflag' set but not used [-Wunused-but-set-variable] int eflag, vflag; ^ [ 7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_alloy_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_alloy_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_alloy_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_alloy_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElasticTimeIntegrator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElasticTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElasticTimeIntegrator.cpp [ 7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_fs_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_fs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_fs_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_fs_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeIntegrator.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElasticTimeIntegrator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElasticTimeIntegrator.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne.cpp [ 8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronChargeDensity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronChargeDensity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronChargeDensity.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne.cpp:27: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronDragPower.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronDragPower.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronDragPower.cpp [ 8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronFlux.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronFlux.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronFlux.cpp [ 8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96_ext.cpp [ 9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronHeatCapacity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronHeatCapacity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronHeatCapacity.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronHeatFlux.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronHeatFlux.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronHeatFlux.cpp [ 9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronPhononExchange.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronPhononExchange.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronPhononExchange.cpp [ 9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye_ext.cpp [ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModel.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModel.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModel.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelDriftDiffusion.cpp [ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModel.h:8, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelTwoTemperature.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelDriftDiffusion.h:8, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelDriftDiffusion.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelElectrostatic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelElectrostatic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelElectrostatic.cpp [ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModel.h:8, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelElectrostatic.h:7, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelElectrostatic.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelTwoTemperature.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelTwoTemperature.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelTwoTemperature.cpp [ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModel.h:8, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelTwoTemperature.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelTwoTemperature.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Element.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Element.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Element.cpp [ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Engine.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Engine.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Engine.cpp [ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Engine.h:9, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Engine.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor.cpp:18: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Interpolate.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Interpolate.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Interpolate.cpp [ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor_shared.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor_shared.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor_shared.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_kernel.h:27:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor_shared.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor_shared.cpp:17: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm.cpp:25: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Mesh.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Mesh.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Mesh.cpp [ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared.cpp:27: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldEulerIntegrator.cpp.o [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft_ext.cpp /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldEulerIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldEulerIntegrator.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldEulerIntegrator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldEulerIntegrator.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldManager.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldManager.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldManager.cpp [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldManager.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldManager.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Function.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Function.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Function.cpp [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FundamentalAtomicQuantity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FundamentalAtomicQuantity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FundamentalAtomicQuantity.cpp [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/GhostManager.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/GhostManager.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/GhostManager.cpp [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm.h:21, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm.cpp:26: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm.h:21, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm_ext.cpp:22: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ImplicitSolveOperator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ImplicitSolveOperator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ImplicitSolveOperator.cpp [ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ImplicitSolveOperator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ImplicitSolveOperator.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/InterscaleOperators.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/InterscaleOperators.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/InterscaleOperators.cpp [ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KD_Tree.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KD_Tree.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KD_Tree.cpp [ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixDef.h:23:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Array.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Array2D.h:9, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KD_Tree.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KD_Tree.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function] static std::string to_cap(const std::string &s) { ^ [ 15%] Linking CXX static library libgpu.a /usr/bin/cmake3 -P CMakeFiles/gpu.dir/cmake_clean_target.cmake /usr/bin/cmake3 -E cmake_link_script CMakeFiles/gpu.dir/link.txt --verbose=1 /usr/bin/ar qc libgpu.a CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dpd.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_alloy_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_fs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor_shared.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl_ext.cpp.o [ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KernelFunction.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KernelFunction.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KernelFunction.cpp /usr/bin/ranlib libgpu.a make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' [ 15%] Built target gpu [ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KinetoThermostat.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KinetoThermostat.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KinetoThermostat.cpp [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Kinetostat.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Kinetostat.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Kinetostat.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KinetoThermostat.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KinetoThermostat.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Kinetostat.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Kinetostat.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.h:25, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LinearSolver.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LinearSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LinearSolver.cpp [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MPI_Wrappers.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MPI_Wrappers.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MPI_Wrappers.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MPI_Wrappers.cpp:2:0: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function] static std::string to_cap(const std::string &s) { ^ [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Material.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Material.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Material.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LinearSolver.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LinearSolver.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Matrix.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Matrix.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Matrix.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixDef.h:23:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Matrix.h:3, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Matrix.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function] static std::string to_cap(const std::string &s) { ^ [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MeshReader.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MeshReader.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MeshReader.cpp [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MoleculeSet.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MoleculeSet.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MoleculeSet.cpp [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/NonLinearSolver.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/NonLinearSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/NonLinearSolver.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/NonLinearSolver.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/NonLinearSolver.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/OutputManager.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/OutputManager.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/OutputManager.cpp [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PaqAtcUtility.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PaqAtcUtility.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PaqAtcUtility.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/OutputManager.cpp: In member function 'void ATC::OutputManager::read_restart_file(std::string, ATC::RESTART_LIST*)': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/OutputManager.cpp:164:42: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&myVal,sizeof(double),1,fp); ^ [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParDiagonalMatrix.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParDiagonalMatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParDiagonalMatrix.cpp [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParSparseMatrix.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParSparseMatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParSparseMatrix.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixDef.h:23:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Matrix.h:3, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/DenseMatrix.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParDiagonalMatrix.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParDiagonalMatrix.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function] static std::string to_cap(const std::string &s) { ^ [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantityLibrary.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantityLibrary.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantityLibrary.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParSparseMatrix.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParSparseMatrix.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixDef.h:23:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Matrix.h:3, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/DenseMatrix.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParSparseMatrix.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParSparseMatrix.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Utility.h: At global scope: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function] static std::string to_cap(const std::string &s) { ^ [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerPairQuantity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerPairQuantity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerPairQuantity.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.h:25, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerPairQuantity.h:7, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerPairQuantity.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PhysicsModel.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PhysicsModel.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PhysicsModel.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.h:25, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantity.h:7, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantityLibrary.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantityLibrary.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PoissonSolver.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PoissonSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PoissonSolver.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PhysicsModel.h:8, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PhysicsModel.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PolynomialSolver.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PolynomialSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PolynomialSolver.cpp [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PrescribedDataManager.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PrescribedDataManager.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PrescribedDataManager.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LinearSolver.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PoissonSolver.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PoissonSolver.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Quadrature.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Quadrature.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Quadrature.cpp [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SchrodingerSolver.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SchrodingerSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SchrodingerSolver.cpp [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SpeciesTimeIntegrator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SpeciesTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SpeciesTimeIntegrator.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LinearSolver.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SchrodingerSolver.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SchrodingerSolver.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Stress.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Stress.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Stress.cpp [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ThermalTimeIntegrator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ThermalTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ThermalTimeIntegrator.cpp [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Thermostat.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Thermostat.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Thermostat.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeIntegrator.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ThermalTimeIntegrator.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ThermalTimeIntegrator.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeFilter.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeFilter.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeFilter.cpp [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeIntegrator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeIntegrator.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Thermostat.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Thermostat.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferLibrary.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferLibrary.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferLibrary.cpp [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferOperator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferOperator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferOperator.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.h:25, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantity.h:7, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantityLibrary.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferOperator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferOperator.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Vector.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Vector.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Vector.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixDef.h:23:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Matrix.h:3, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Vector.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/DenseVector.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Vector.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function] static std::string to_cap(const std::string &s) { ^ [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ViscousStress.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ViscousStress.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ViscousStress.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.h:25, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantity.h:7, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantityLibrary.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferOperator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferLibrary.h:11, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferLibrary.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationChargeDiffusion.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationChargeDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationChargeDiffusion.cpp [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationDiffusion.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationDiffusion.cpp [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronContinuity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronContinuity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronContinuity.cpp [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronMomentum.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronMomentum.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronMomentum.cpp [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronTemperature.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronTemperature.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronTemperature.cpp [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationMassDiffusion.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationMassDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationMassDiffusion.cpp [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationMomentum.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationMomentum.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationMomentum.cpp [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationPhononTemperature.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationPhononTemperature.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationPhononTemperature.cpp [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationPoisson.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationPoisson.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationPoisson.cpp [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationSchrodinger.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationSchrodinger.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationSchrodinger.cpp [ 19%] Linking CXX static library libatc.a /usr/bin/cmake3 -P CMakeFiles/atc.dir/cmake_clean_target.cmake /usr/bin/cmake3 -E cmake_link_script CMakeFiles/atc.dir/link.txt --verbose=1 /usr/bin/ar qc libatc.a CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Coupling.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingEnergy.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMass.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentum.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentumEnergy.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Transfer.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferKernel.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferPartitionOfUnity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomToMoleculeTransfer.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/BodyForce.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CBLattice.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CauchyBorn.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CbPotential.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ChargeRegulator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ConcentrationRegulator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElasticTimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronChargeDensity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronDragPower.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronFlux.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronHeatCapacity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronHeatFlux.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronPhononExchange.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModel.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelElectrostatic.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelTwoTemperature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Element.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Engine.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Interpolate.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Mesh.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldEulerIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Function.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FundamentalAtomicQuantity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/GhostManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ImplicitSolveOperator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/InterscaleOperators.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KD_Tree.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KernelFunction.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KinetoThermostat.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Kinetostat.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LinearSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MPI_Wrappers.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Material.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Matrix.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MeshReader.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MoleculeSet.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/NonLinearSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/OutputManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PaqAtcUtility.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParDiagonalMatrix.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParSparseMatrix.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantityLibrary.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerPairQuantity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PhysicsModel.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PoissonSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PolynomialSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PrescribedDataManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Quadrature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SchrodingerSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SpeciesTimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Stress.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ThermalTimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Thermostat.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeFilter.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferLibrary.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferOperator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Vector.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ViscousStress.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationChargeDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronContinuity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronMomentum.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronTemperature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationMassDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationMomentum.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationPhononTemperature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationPoisson.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationSchrodinger.cpp.o /usr/bin/ranlib libatc.a make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' [ 19%] Built target atc /usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' cd /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/CMakeFiles/lammps.dir/DependInfo.cmake --color= Scanning dependencies of target lammps make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' /usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' [ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_hybrid.cpp.o [ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/angle.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/angle.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/angle.cpp /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_hybrid.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_hybrid.cpp: In member function 'virtual void LAMMPS_NS::AngleHybrid::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_hybrid.cpp:338:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nstyles,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_hybrid.cpp:347:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_hybrid.cpp:350:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(keywords[m],sizeof(char),n,fp); ^ [ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_zero.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_zero.cpp [ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_zero.cpp: In member function 'virtual void LAMMPS_NS::AngleZero::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_zero.cpp:133:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&theta0[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom.cpp: In member function 'int LAMMPS_NS::Atom::memcheck(const char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom.cpp:2280:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if (strlen(memstr) + n >= memlength) { ^ [ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_map.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_map.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_map.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom.cpp: In member function 'void LAMMPS_NS::Atom::data_atoms(int, char*, LAMMPS_NS::tagint, LAMMPS_NS::tagint, int, int, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom.cpp:938:48: warning: 'iptr' may be used uninitialized in this function [-Wmaybe-uninitialized] imagedata = ((imageint) (atoi(values[iptr]) + IMGMAX) & IMGMASK) | ^ [ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec.cpp [ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_atomic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_atomic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_atomic.cpp [ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_body.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_body.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_body.cpp [ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_charge.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_charge.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_charge.cpp [ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_ellipsoid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_ellipsoid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_ellipsoid.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_hybrid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_hybrid.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_line.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_line.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_line.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_sphere.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_tri.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/balance.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/balance.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/balance.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/body.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/body.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/body.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/bond.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/bond.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/bond.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_hybrid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_hybrid.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_zero.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_zero.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_hybrid.cpp: In member function 'virtual void LAMMPS_NS::BondHybrid::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_hybrid.cpp:322:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nstyles,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_hybrid.cpp:331:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_hybrid.cpp:334:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(keywords[m],sizeof(char),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_zero.cpp: In member function 'virtual void LAMMPS_NS::BondZero::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_zero.cpp:131:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[1],sizeof(double),atom->nbondtypes,fp); ^ [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/change_box.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/change_box.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/change_box.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/citeme.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/citeme.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/citeme.cpp [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/comm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/comm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/comm.cpp [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_brick.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_brick.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_brick.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_brick.cpp: In member function 'virtual void LAMMPS_NS::CommBrick::borders()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_brick.cpp:712:28: warning: 'nfirst' may be used uninitialized in this function [-Wmaybe-uninitialized] int nsend,nrecv,sendflag,nfirst,nlast,ngroup; ^ [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_tiled.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_tiled.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_tiled.cpp [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_tiled.cpp: In member function 'void LAMMPS_NS::CommTiled::box_drop_brick(int, double*, double*, int&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_tiled.cpp:1500:17: warning: 'dir' may be used uninitialized in this function [-Wmaybe-uninitialized] index += dir; ^ [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_aggregate_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_aggregate_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_aggregate_atom.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_tiled.cpp: In member function 'virtual void LAMMPS_NS::CommTiled::borders()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_tiled.cpp:818:9: warning: 'nlast' may be used uninitialized in this function [-Wmaybe-uninitialized] for (i = atom->nlocal; i < nlast; i++) { ^ [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle.cpp [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle_local.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle_local.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle_local.cpp [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angmom_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angmom_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angmom_chunk.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle_local.cpp: In member function 'int LAMMPS_NS::ComputeAngleLocal::compute_angles(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle_local.cpp:169:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] tagprev = tag[atom2] - iatom - 1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle_local.cpp:167:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] if (tag[atom2] != onemols[imol]->angle_atom2[atom2][i]) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle_local.cpp:208:22: warning: 'ebuf' may be used uninitialized in this function [-Wmaybe-uninitialized] else ebuf[n] = 0.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle_local.cpp:202:17: warning: 'tbuf' may be used uninitialized in this function [-Wmaybe-uninitialized] tbuf[n] = 180.0*acos(c)/MY_PI; ^ [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond.cpp [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_centro_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_centro_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_centro_atom.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp: In member function 'int LAMMPS_NS::ComputeBondLocal::compute_bonds(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp:315:28: warning: 'engrot' may be used uninitialized in this function [-Wmaybe-uninitialized] ptr[n] = engrot; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp:312:28: warning: 'engvib' may be used uninitialized in this function [-Wmaybe-uninitialized] ptr[n] = engvib; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp:318:30: warning: 'engtrans' may be used uninitialized in this function [-Wmaybe-uninitialized] ptr[n] = engtrans; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp:306:28: warning: 'engpot' may be used uninitialized in this function [-Wmaybe-uninitialized] ptr[n] = engpot; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp:321:34: warning: 'omegasq' may be used uninitialized in this function [-Wmaybe-uninitialized] ptr[n] = sqrt(omegasq); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp:324:26: warning: 'vvib' may be used uninitialized in this function [-Wmaybe-uninitialized] ptr[n] = vvib; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp:201:47: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] btype = onemols[imol]->bond_type[iatom][i]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp:201:29: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] btype = onemols[imol]->bond_type[iatom][i]; ^ [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_cluster_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_cluster_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_cluster_atom.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin1d()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:1512:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized] if (xremap < boxlo[idim]) xremap += prd[idim]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:1513:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized] if (xremap >= boxhi[idim]) xremap -= prd[idim]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:1512:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized] if (xremap < boxlo[idim]) xremap += prd[idim]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin2d()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:1614:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized] if (yremap < boxlo[jdim]) yremap += prd[jdim]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:1615:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized] if (yremap >= boxhi[jdim]) yremap -= prd[jdim]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:1614:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized] if (yremap < boxlo[jdim]) yremap += prd[jdim]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin3d()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:1747:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized] if (zremap < boxlo[kdim]) zremap += prd[kdim]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:1748:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized] if (zremap >= boxhi[kdim]) zremap -= prd[kdim]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:1747:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized] if (zremap < boxlo[kdim]) zremap += prd[kdim]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp: In constructor 'LAMMPS_NS::ComputeChunkAtom::ComputeChunkAtom(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:413:29: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized] delta[idim] *= scale; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:263:59: warning: 'idim' may be used uninitialized in this function [-Wmaybe-uninitialized] maxvalue[idim] = force->numeric(FLERR,arg[iarg+3]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:197:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized] if (strcmp(arg[iarg],"region") == 0) { ^ [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_cna_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_cna_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_cna_atom.cpp [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_com.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_com.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_com.cpp [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_com_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_com_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_com_chunk.cpp [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_contact_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_contact_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_contact_atom.cpp [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_coord_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_coord_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_coord_atom.cpp [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral.cpp [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral_local.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral_local.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral_local.cpp [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dipole_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dipole_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dipole_chunk.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral_local.cpp: In member function 'int LAMMPS_NS::ComputeDihedralLocal::compute_dihedrals(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral_local.cpp:162:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] tagprev = tag[atom2] - iatom - 1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral_local.cpp:161:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] if (tag[atom2] != onemols[imol]->dihedral_atom2[atom2][i]) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral_local.cpp:219:17: warning: 'pbuf' may be used uninitialized in this function [-Wmaybe-uninitialized] pbuf[n] = 180.0*atan2(s,c)/MY_PI; ^ [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_displace_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_displace_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_displace_atom.cpp [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_erotate_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_erotate_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_erotate_sphere.cpp [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_erotate_sphere_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_erotate_sphere_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_erotate_sphere_atom.cpp [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_fragment_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_fragment_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_fragment_atom.cpp [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_global_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_global_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_global_atom.cpp [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_group_group.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_group_group.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_group_group.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_global_atom.cpp: In member function 'virtual void LAMMPS_NS::ComputeGlobalAtom::compute_peratom()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_global_atom.cpp:521:29: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized] if (j >= 0 && j < vmax) array_atom[i][m] = source[j]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_global_atom.cpp:452:29: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized] if (j >= 0 && j < vmax) array_atom[i][m] = source[j]; ^ [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_gyration.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_gyration.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_gyration.cpp [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_gyration_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_gyration_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_gyration_chunk.cpp [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_heat_flux.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_heat_flux.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_heat_flux.cpp [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_hexorder_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_hexorder_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_hexorder_atom.cpp [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper.cpp [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper_local.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper_local.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper_local.cpp [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_inertia_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_inertia_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_inertia_chunk.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper_local.cpp: In member function 'int LAMMPS_NS::ComputeImproperLocal::compute_impropers(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper_local.cpp:163:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] tagprev = tag[atom2] - iatom - 1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper_local.cpp:162:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] if (tag[atom2] != onemols[imol]->improper_atom2[atom2][i]) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper_local.cpp:218:17: warning: 'cbuf' may be used uninitialized in this function [-Wmaybe-uninitialized] cbuf[n] = 180.0*acos(c)/MY_PI; ^ [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_ke.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_ke.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_ke.cpp [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_ke_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_ke_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_ke_atom.cpp [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_msd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_msd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_msd.cpp [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_msd_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_msd_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_msd_chunk.cpp [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_omega_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_omega_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_omega_chunk.cpp [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_orientorder_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_orientorder_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_orientorder_atom.cpp [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pair.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pair.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pair.cpp [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pair_local.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pair_local.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pair_local.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pe.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pe.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pe.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pe_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pe_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pe_atom.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pressure.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pressure.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pressure.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_property_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_property_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_property_atom.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pressure.cpp: In member function 'virtual double LAMMPS_NS::ComputePressure::compute_scalar()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pressure.cpp:205:42: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] scalar = (temperature->dof * boltz * t + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pressure.cpp: In member function 'virtual void LAMMPS_NS::ComputePressure::compute_vector()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pressure.cpp:243:33: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized] vector[i] = (ke_tensor[i] + virial[i]) * inv_volume * nktv2p; ^ [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_property_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_property_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_property_chunk.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_property_local.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_property_local.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_property_local.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_rdf.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_rdf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_rdf.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_reduce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_reduce.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_reduce.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_reduce_region.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_reduce_region.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_reduce_region.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_slice.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_slice.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_slice.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_stress_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_stress_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_stress_atom.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_chunk.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_com.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_com.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_com.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_deform.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_deform.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_deform.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_partial.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_partial.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_profile.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_profile.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_profile.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_ramp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_ramp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_ramp.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_region.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_region.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_region.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_sphere.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_torque_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_torque_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_torque_chunk.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_vacf.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_vacf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_vacf.cpp [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_vcm_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_vcm_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_vcm_chunk.cpp [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/create_atoms.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/create_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_atoms.cpp [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/create_bonds.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/create_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_bonds.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_atoms.cpp: In member function 'void LAMMPS_NS::CreateAtoms::add_random()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_atoms.cpp:656:55: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized] coord[1] < boxlo[1] || coord[1] >= boxhi[1] || ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_atoms.cpp:656:31: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized] coord[1] < boxlo[1] || coord[1] >= boxhi[1] || ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_atoms.cpp: In member function 'void LAMMPS_NS::CreateAtoms::command(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_atoms.cpp:228:46: warning: 'molseed' may be used uninitialized in this function [-Wmaybe-uninitialized] ranmol = new RanMars(lmp,molseed+comm->me); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_atoms.cpp:118:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized] if (strcmp(arg[iarg],"basis") == 0) { ^ [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/create_box.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/create_box.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_box.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_bonds.cpp: In member function 'void LAMMPS_NS::CreateBonds::command(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_bonds.cpp:110:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized] if (strcmp(arg[iarg],"special") == 0) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_bonds.cpp:129:10: warning: 'style' may be used uninitialized in this function [-Wmaybe-uninitialized] } else if (style == SANGLE) { ^ [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/delete_atoms.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/delete_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/delete_atoms.cpp [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/delete_bonds.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/delete_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/delete_bonds.cpp [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral.cpp [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_hybrid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_hybrid.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_hybrid.cpp: In member function 'virtual void LAMMPS_NS::DihedralHybrid::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_hybrid.cpp:323:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nstyles,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_hybrid.cpp:332:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_hybrid.cpp:335:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(keywords[m],sizeof(char),n,fp); ^ [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_zero.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_zero.cpp [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/displace_atoms.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/displace_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/displace_atoms.cpp [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/domain.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/domain.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/domain.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/displace_atoms.cpp: In member function 'void LAMMPS_NS::DisplaceAtoms::command(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/displace_atoms.cpp:128:5: warning: 'd_dim' may be used uninitialized in this function [-Wmaybe-uninitialized] if (d_dim == 0) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/displace_atoms.cpp:146:5: warning: 'coord_dim' may be used uninitialized in this function [-Wmaybe-uninitialized] if (coord_dim == 0) { ^ [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/domain.cpp: In member function 'void LAMMPS_NS::Domain::box_too_small_check()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/domain.cpp:853:43: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] if (onemols[imol]->bond_type[iatom][j] < 0) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/domain.cpp:853:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] if (onemols[imol]->bond_type[iatom][j] < 0) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/domain.cpp: In member function 'void LAMMPS_NS::Domain::image_check()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/domain.cpp:754:43: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] if (onemols[imol]->bond_type[iatom][j] < 0) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/domain.cpp:754:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] if (onemols[imol]->bond_type[iatom][j] < 0) continue; ^ [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_atom.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump.cpp: In member function 'virtual void LAMMPS_NS::Dump::write()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump.cpp:511:20: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized] atom->v = vhold; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump.cpp:510:20: warning: 'xhold' may be used uninitialized in this function [-Wmaybe-uninitialized] atom->x = xhold; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump.cpp:512:28: warning: 'imagehold' may be used uninitialized in this function [-Wmaybe-uninitialized] atom->image = imagehold; ^ [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_cfg.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_cfg.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_cfg.cpp [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_custom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_custom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_custom.cpp [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_dcd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_dcd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_dcd.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_custom.cpp: In member function 'virtual int LAMMPS_NS::DumpCustom::count()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_custom.cpp:1026:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses] if (choose[i] && (*ptr == 0.0 && values[i] == 0.0) || ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_custom.cpp:1031:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses] if (choose[i] && (*ptr == 0.0 && value == 0.0) || ^ [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_custom.cpp:1032:30: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized] (*ptr != 0.0 && value != 0.0)) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_custom.cpp:1027:41: warning: 'values' may be used uninitialized in this function [-Wmaybe-uninitialized] (*ptr != 0.0 && values[i] != 0.0)) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_custom.cpp:528:18: warning: 'ptrhold' may be used uninitialized in this function [-Wmaybe-uninitialized] double *ptr,*ptrhold; ^ [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_local.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_local.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_local.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp: In member function 'void LAMMPS_NS::DumpImage::create_image()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp:1033:66: warning: 'color2' may be used uninitialized in this function [-Wmaybe-uninitialized] image->draw_cylinder(xmid,x[atom2],color2,diameter,3); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp:1027:66: warning: 'color1' may be used uninitialized in this function [-Wmaybe-uninitialized] image->draw_cylinder(x[atom1],xmid,color1,diameter,3); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp:968:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] btype = atom->map(onemols[imol]->bond_type[iatom][m]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp:968:41: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] btype = atom->map(onemols[imol]->bond_type[iatom][m]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp:831:55: warning: 'color' may be used uninitialized in this function [-Wmaybe-uninitialized] image->draw_cylinder(pt1,pt2,color,ldiamvalue,3); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp:1036:72: warning: 'diameter' may be used uninitialized in this function [-Wmaybe-uninitialized] } else image->draw_cylinder(x[atom1],x[atom2],color,diameter,3); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp: In member function 'virtual int LAMMPS_NS::DumpImage::modify_param(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp:1300:23: warning: 'factor' may be used uninitialized in this function [-Wmaybe-uninitialized] int n = 6 + factor*nentry; ^ [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_movie.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_movie.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_movie.cpp [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_xyz.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_xyz.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_xyz.cpp [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/error.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/error.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/error.cpp [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/finish.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/finish.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/finish.cpp [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/finish.cpp: In member function 'void LAMMPS_NS::Finish::end(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/finish.cpp:776:33: warning: 'nneighfull' may be used uninitialized in this function [-Wmaybe-uninitialized] tmp = MAX(nneigh,nneighfull); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/finish.cpp:776:33: warning: 'nneigh' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_adapt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_adapt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_adapt.cpp [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_addforce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_addforce.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_addforce.cpp [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_atom.cpp [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_chunk.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_chunk.cpp: In member function 'virtual void LAMMPS_NS::FixAveChunk::end_of_step()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_chunk.cpp:1058:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result] if (fileend > 0) ftruncate(fileno(fp),fileend); ^ [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_correlate.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_correlate.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_correlate.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_correlate.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelate::end_of_step()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_correlate.cpp:537:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result] if (fileend > 0) ftruncate(fileno(fp),fileend); ^ [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo.cpp: In member function 'virtual void LAMMPS_NS::FixAveHisto::end_of_step()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo.cpp:828:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result] if (fileend > 0) ftruncate(fileno(fp),fileend); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_correlate.cpp:482:34: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized] values[lastindex][i] = scalar; ^ [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo_weight.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo_weight.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo_weight.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo_weight.cpp: In member function 'virtual void LAMMPS_NS::FixAveHistoWeight::end_of_step()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo_weight.cpp:499:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result] if (fileend > 0) ftruncate(fileno(fp),fileend); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo.cpp: In constructor 'LAMMPS_NS::FixAveHisto::FixAveHisto(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo.cpp:233:10: warning: 'kindflag' may be used uninitialized in this function [-Wmaybe-uninitialized] else if (kindflag != kind) ^ [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp:700:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result] if (fileend > 0) ftruncate(fileno(fp),fileend); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_vector(LAMMPS_NS::bigint)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp:911:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result] if (fileend > 0) ftruncate(fileno(fp),fileend); ^ [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_aveforce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_aveforce.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_aveforce.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp: In member function 'int LAMMPS_NS::FixAveTime::column_length(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp:971:9: warning: 'lengthone' may be used uninitialized in this function [-Wmaybe-uninitialized] if (lengthone != nrows) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp:629:29: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized] else vector[i] += scalar; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp: In constructor 'LAMMPS_NS::FixAveTime::FixAveTime(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp:411:9: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized] if (value == -1) ^ [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_balance.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_balance.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_balance.cpp [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_box_relax.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_box_relax.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_box_relax.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_balance.cpp: In member function 'void LAMMPS_NS::FixBalance::rebalance()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_balance.cpp:298:67: warning: 'sendproc' may be used uninitialized in this function [-Wmaybe-uninitialized] if (lbstyle == BISECTION) irregular->migrate_atoms(0,1,sendproc); ^ [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_controller.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_controller.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_controller.cpp [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_deform.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_deform.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_deform.cpp [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_deprecated.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_deprecated.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_deform.cpp: In constructor 'LAMMPS_NS::FixDeform::FixDeform(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_deform.cpp:184:18: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized] set[index].style = VARIABLE; ^ [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_drag.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_drag.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_drag.cpp [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_dt_reset.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_dt_reset.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_dt_reset.cpp [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_enforce2d.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_enforce2d.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_enforce2d.cpp [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_external.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_external.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_external.cpp [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_gravity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_gravity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_gravity.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_group.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_group.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_group.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_halt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_halt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_halt.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_heat.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_heat.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_heat.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_indent.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_indent.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_indent.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_langevin.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_langevin.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_langevin.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_lineforce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_lineforce.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_lineforce.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_minimize.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_minimize.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_minimize.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_momentum.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_momentum.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_momentum.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_move.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_move.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_move.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_neigh_history.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_neigh_history.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_neigh_history.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_neigh_history.cpp:17:0: /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_neigh_history.h: In constructor 'LAMMPS_NS::FixNeighHistory::FixNeighHistory(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_neigh_history.h:76:12: warning: 'LAMMPS_NS::FixNeighHistory::valuepartner' will be initialized after [-Wreorder] double **valuepartner; // values for the partners ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_neigh_history.h:34:15: warning: 'LAMMPS_NS::Pair* LAMMPS_NS::FixNeighHistory::pair' [-Wreorder] class Pair *pair; // ptr to pair style that uses neighbor history ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_neigh_history.cpp:36:1: warning: when initialized here [-Wreorder] FixNeighHistory::FixNeighHistory(LAMMPS *lmp, int narg, char **arg) : ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_move.cpp: In member function 'virtual void LAMMPS_NS::FixMove::initial_integrate(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_move.cpp:847:61: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized] if (zvarstyle == EQUAL) x[i][2] = xoriginal[i][2] + dz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_move.cpp:817:61: warning: 'dy' may be used uninitialized in this function [-Wmaybe-uninitialized] if (yvarstyle == EQUAL) x[i][1] = xoriginal[i][1] + dy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_move.cpp:787:61: warning: 'dx' may be used uninitialized in this function [-Wmaybe-uninitialized] if (xvarstyle == EQUAL) x[i][0] = xoriginal[i][0] + dx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_move.cpp: In constructor 'LAMMPS_NS::FixMove::FixMove(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_move.cpp:176:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized] if (strcmp(arg[iarg],"units") == 0) { ^ [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nh.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nh.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nh.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nh_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nh_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nh_sphere.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nph.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nph.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nph.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nph_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nph_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nph_sphere.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_npt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_npt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_npt.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_npt_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_npt_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_npt_sphere.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve_limit.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve_limit.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve_limit.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve_noforce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve_noforce.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve_noforce.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve_sphere.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nvt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nvt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nvt.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nvt_sllod.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nvt_sllod.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nvt_sllod.cpp [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nvt_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nvt_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nvt_sphere.cpp [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_planeforce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_planeforce.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_planeforce.cpp [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_press_berendsen.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_press_berendsen.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_press_berendsen.cpp [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_print.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_print.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_print.cpp [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_property_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_property_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_property_atom.cpp [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_read_restart.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_read_restart.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_read_restart.cpp [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_recenter.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_recenter.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_recenter.cpp [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_respa.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_respa.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_respa.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_recenter.cpp: In member function 'virtual void LAMMPS_NS::FixRecenter::initial_integrate(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_recenter.cpp:182:41: warning: 'bboxhi' may be used uninitialized in this function [-Wmaybe-uninitialized] ztarget = bboxlo[2] + zcom*(bboxhi[2] - bboxlo[2]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_recenter.cpp:182:53: warning: 'bboxlo' may be used uninitialized in this function [-Wmaybe-uninitialized] ztarget = bboxlo[2] + zcom*(bboxhi[2] - bboxlo[2]); ^ [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_restrain.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_restrain.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_restrain.cpp [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_setforce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_setforce.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_setforce.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_restrain.cpp: In member function 'void LAMMPS_NS::FixRestrain::restrain_dihedral(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_restrain.cpp:566:33: warning: 'ddf1' may be used uninitialized in this function [-Wmaybe-uninitialized] df1 = df1*cos_target[m] - ddf1*sin_target[m]; ^ [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring_chunk.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring_rg.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring_rg.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring_rg.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring_self.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring_self.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring_self.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_store.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_store.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_store.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_store_force.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_store_force.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_store_force.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_store_state.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_store_state.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_store_state.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_berendsen.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_berendsen.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_berendsen.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_csld.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_csld.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_csld.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_csvr.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_csvr.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_csvr.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_rescale.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_rescale.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_rescale.cpp [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_tmd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_tmd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_tmd.cpp [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_vector.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_vector.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_vector.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_tmd.cpp: In member function 'void LAMMPS_NS::FixTMD::readfile(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_tmd.cpp:457:7: warning: 'imageflag' may be used uninitialized in this function [-Wmaybe-uninitialized] if (imageflag) ^ [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_viscous.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_viscous.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_viscous.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_vector.cpp: In constructor 'LAMMPS_NS::FixVector::FixVector(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_vector.cpp:149:26: warning: 'finalvalue' may be used uninitialized in this function [-Wmaybe-uninitialized] extarray = finalvalue; ^ [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall.cpp [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_harmonic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_harmonic.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall.cpp: In constructor 'LAMMPS_NS::FixWall::FixWall(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall.cpp:77:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized] wallwhich[nwall] = newwall; ^ [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_lj1043.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_lj1043.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_lj1043.cpp [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_lj126.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_lj126.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_lj126.cpp [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_lj93.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_lj93.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_lj93.cpp [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_reflect.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_reflect.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_reflect.cpp [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_region.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_region.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_region.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_reflect.cpp: In constructor 'LAMMPS_NS::FixWallReflect::FixWallReflect(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_reflect.cpp:68:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized] wallwhich[nwall] = newwall; ^ [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/force.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/force.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/force.cpp [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/group.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/group.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/group.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/group.cpp: In member function 'void LAMMPS_NS::Group::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/group.cpp:730:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&ngroup,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/group.cpp:742:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/group.cpp:746:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(names[i],sizeof(char),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/group.cpp: In member function 'void LAMMPS_NS::Group::assign(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/group.cpp:301:12: warning: 'category' may be used uninitialized in this function [-Wmaybe-uninitialized] else if (category == MOLECULE) tattribute = atom->molecule; ^ [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/image.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/image.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/image.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/image.cpp: In member function 'void LAMMPS_NS::Image::draw_cube(double*, double*, double)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/image.cpp:516:31: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] tdir[2] = camDir[2] * t; ^ [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance.cpp [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_group.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_group.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_group.cpp [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_neigh.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_neigh.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_neigh.cpp [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_store.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_store.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_store.cpp [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_time.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_time.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_time.cpp [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_var.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_var.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_var.cpp [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/improper.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/improper.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/improper.cpp [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_hybrid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_hybrid.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_hybrid.cpp: In member function 'virtual void LAMMPS_NS::ImproperHybrid::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_hybrid.cpp:320:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nstyles,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_hybrid.cpp:329:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_hybrid.cpp:332:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(keywords[m],sizeof(char),n,fp); ^ [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_zero.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_zero.cpp [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/info.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/info.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/info.cpp [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/input.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/input.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/input.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/info.cpp: In function 'void print_columns(FILE*, std::vector >&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/info.cpp:1123:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (int i = 0; i < styles.size(); ++i) { ^ [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/integrate.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/integrate.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/integrate.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/input.cpp: In member function 'void LAMMPS_NS::Input::partition()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/input.cpp:1161:3: warning: 'yesflag' may be used uninitialized in this function [-Wmaybe-uninitialized] if (yesflag) { ^ [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/irregular.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/irregular.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/irregular.cpp [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/kspace.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/kspace.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/kspace.cpp [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/lammps.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/lammps.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/lammps.cpp [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/lattice.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/lattice.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/lattice.cpp [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/library.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/library.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/library.cpp [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/math_special.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/math_special.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_special.cpp [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/memory.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/memory.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/memory.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp: In function 'void MathExtra::no_squish_rotate(int, double*, double*, double*, double)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp:260:52: warning: 'kq[3]' may be used uninitialized in this function [-Wmaybe-uninitialized] phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp:260:39: warning: 'kq[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp:260:26: warning: 'kq[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp:260:13: warning: 'kq[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp:271:28: warning: 'kp[3]' may be used uninitialized in this function [-Wmaybe-uninitialized] p[3] = c_phi*p[3] + s_phi*kp[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp:270:28: warning: 'kp[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] p[2] = c_phi*p[2] + s_phi*kp[2]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp:269:28: warning: 'kp[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] p[1] = c_phi*p[1] + s_phi*kp[1]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp:268:28: warning: 'kp[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] p[0] = c_phi*p[0] + s_phi*kp[0]; ^ [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/min.cpp [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_cg.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_cg.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/min_cg.cpp [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_fire.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_fire.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/min_fire.cpp [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_hftn.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_hftn.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/min_hftn.cpp [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_linesearch.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_linesearch.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/min_linesearch.cpp [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_quickmin.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_quickmin.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/min_quickmin.cpp [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_sd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_sd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/min_sd.cpp [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/minimize.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/minimize.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/minimize.cpp [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/molecule.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/molecule.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/molecule.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp: In member function 'int LAMMPS_NS::Modify::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1363:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nfix_restart_global,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1380:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1383:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(id_restart_global[i],sizeof(char),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1386:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1389:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(style_restart_global[i],sizeof(char),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1392:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1395:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(state_restart_global[i],sizeof(char),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1405:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nfix_restart_peratom,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1422:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1425:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(id_restart_peratom[i],sizeof(char),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1428:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1431:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(style_restart_peratom[i],sizeof(char),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1434:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nbin.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nbin.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nbin.cpp [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nbin_standard.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nbin_standard.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nbin_standard.cpp [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.cpp [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_request.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_request.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_request.cpp [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/neighbor.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/neighbor.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/neighbor.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/neighbor.cpp: In member function 'int LAMMPS_NS::Neighbor::choose_stencil(LAMMPS_NS::NeighRequest*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/neighbor.cpp:1674:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized] if (newtflag) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/neighbor.cpp: In member function 'int LAMMPS_NS::Neighbor::choose_pair(LAMMPS_NS::NeighRequest*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/neighbor.cpp:1782:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized] if (newtflag) { ^ [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair.cpp [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_copy.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_copy.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_copy.cpp [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin.cpp: In member function 'virtual void LAMMPS_NS::NPairFullBin::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin.cpp:104:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin.cpp:103:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin.cpp:103:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_atomonly.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_atomonly.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_atomonly.cpp [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_ghost.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_ghost.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairFullBinGhost::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_ghost.cpp:110:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_ghost.cpp:109:67: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_ghost.cpp:109:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_multi.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_multi.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_multi.cpp [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_multi.cpp: In member function 'virtual void LAMMPS_NS::NPairFullMulti::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_multi.cpp:111:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_multi.cpp:110:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_multi.cpp:110:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq.cpp: In member function 'virtual void LAMMPS_NS::NPairFullNsq::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq.cpp:105:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq.cpp:104:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq.cpp:104:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq.cpp:89:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized] if (includegroup && !(mask[j] & bitmask)) continue; ^ [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq_ghost.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq_ghost.cpp [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_atomonly_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_atomonly_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_atomonly_newton.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairFullNsqGhost::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq_ghost.cpp:104:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq_ghost.cpp:103:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq_ghost.cpp:103:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff.cpp [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff_ghost.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff_ghost.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtoff::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff.cpp:108:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff.cpp:107:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff.cpp:107:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtoffGhost::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff_ghost.cpp:116:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff_ghost.cpp:115:67: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff_ghost.cpp:115:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton.cpp [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton_tri.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewton::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton.cpp:140:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton.cpp:139:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton.cpp:139:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtonTri::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton_tri.cpp:114:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton_tri.cpp:113:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton_tri.cpp:113:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newtoff.cpp [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewtoff::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newtoff.cpp:115:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newtoff.cpp:114:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newtoff.cpp:114:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton_tri.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewton::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton.cpp:148:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton.cpp:147:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton.cpp:147:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewtonTri::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton_tri.cpp:123:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton_tri.cpp:122:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton_tri.cpp:122:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff_ghost.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff_ghost.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewtoff::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff.cpp:106:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff.cpp:105:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff.cpp:105:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff.cpp:90:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized] if (includegroup && !(mask[j] & bitmask)) continue; ^ [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newton.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewtoffGhost::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff_ghost.cpp:115:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff_ghost.cpp:114:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff_ghost.cpp:114:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff_ghost.cpp:127:39: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized] if (includegroup && !(mask[j] & bitmask)) continue; ^ [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewton::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newton.cpp:123:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newton.cpp:122:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newton.cpp:122:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newton.cpp:91:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized] if (includegroup && !(mask[j] & bitmask)) continue; ^ [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewtoff::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp:174:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp:132:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp:131:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp:131:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp:152:41: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] neighptr_middle[n_middle++] = j ^ (which << SBBITS); ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] errorflag = 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp:72:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewton::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:220:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:178:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:177:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:177:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:153:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] neighptr_middle[n_middle++] = j ^ (which << SBBITS); ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] index += n; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:71:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:220:45: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:221:36: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] numneigh_middle[i] = n_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:219:29: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] ilist_middle[inum] = i; ^ [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewtonTri::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp:182:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp:140:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp:139:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp:139:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp:160:41: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] neighptr_middle[n_middle++] = j ^ (which << SBBITS); ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] errorflag = 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp:72:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaNsqNewtoff::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp:169:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp:130:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp:129:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp:129:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp:148:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] neighptr_middle[n_middle++] = j ^ (which << SBBITS); ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] errorflag = 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp:76:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp:114:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized] if (includegroup && !(mask[j] & bitmask)) continue; ^ [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_bin_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_bin_newtoff.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaNsqNewton::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp:189:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp:149:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp:148:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp:148:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp:168:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] neighptr_middle[n_middle++] = j ^ (which << SBBITS); ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] errorflag = 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp:78:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp:117:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized] if (includegroup && !(mask[j] & bitmask)) continue; ^ [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_bin_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_bin_newton.cpp [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_bin_newton_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_bin_newton_tri.cpp [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newtoff.cpp [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newton.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeNsqNewtoff::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newtoff.cpp:79:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized] if (includegroup && !(mask[j] & bitmask)) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeNsqNewton::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newton.cpp:82:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized] if (includegroup && !(mask[j] & bitmask)) continue; ^ [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_halffull_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_halffull_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_halffull_newtoff.cpp [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_halffull_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_halffull_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_halffull_newton.cpp [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip.cpp [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_respa.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_respa.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_respa.cpp [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_size.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_size.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_size.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_respa.cpp: In member function 'virtual void LAMMPS_NS::NPairSkipRespa::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_respa.cpp:152:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_respa.cpp:153:36: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] numneigh_middle[i] = n_middle; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_respa.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:223:67: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] if (posix_memalign(&ptr, LAMMPS_MEMALIGN, pagesize*sizeof(T))) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_respa.cpp:64:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_size_off2on.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_size_off2on.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_size_off2on.cpp [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_size_off2on_oneside.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_size_off2on_oneside.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_size_off2on_oneside.cpp [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_bin_2d.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_bin_2d.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_bin_2d.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_bin_3d.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_bin_3d.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_bin_3d.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_ghost_bin_2d.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_ghost_bin_2d.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_ghost_bin_2d.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_ghost_bin_3d.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_ghost_bin_3d.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_ghost_bin_3d.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_multi_2d.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_multi_2d.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_multi_2d.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_multi_3d.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_multi_3d.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_multi_3d.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_2d_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_2d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_2d_newtoff.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_2d_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_2d_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_2d_newton.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_2d_newton_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_2d_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_2d_newton_tri.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_3d_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_3d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_3d_newtoff.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_3d_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_3d_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_3d_newton.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_3d_newton_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_3d_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_3d_newton_tri.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_ghost_bin_2d_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_ghost_bin_2d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_ghost_bin_2d_newtoff.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_ghost_bin_3d_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_ghost_bin_3d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_ghost_bin_3d_newtoff.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_2d_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_2d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_2d_newtoff.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_2d_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_2d_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_2d_newton.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_2d_newton_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_2d_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_2d_newton_tri.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_3d_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_3d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_3d_newtoff.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_3d_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_3d_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_3d_newton.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_3d_newton_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_3d_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_3d_newton_tri.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_angle_all.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_angle_all.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_angle_all.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_angle_partial.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_angle_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_angle_partial.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_angle_template.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_angle_template.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_angle_template.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_bond_all.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_bond_all.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_bond_all.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_bond_partial.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_bond_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_bond_partial.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_bond_template.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_bond_template.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_bond_template.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_dihedral_all.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_dihedral_all.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_dihedral_all.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_dihedral_partial.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_dihedral_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_dihedral_partial.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_dihedral_template.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_dihedral_template.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_dihedral_template.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_improper_all.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_improper_all.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_improper_all.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_improper_partial.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_improper_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_improper_partial.cpp [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_improper_template.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_improper_template.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_improper_template.cpp [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/output.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/output.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/output.cpp [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp: In member function 'void LAMMPS_NS::Pair::write_file(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp:1672:5: warning: 'rsq' may be used uninitialized in this function [-Wmaybe-uninitialized] if (rsq < cutsq[itype][jtype]) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp:1683:32: warning: 'q_hold' may be used uninitialized in this function [-Wmaybe-uninitialized] if (atom->q) atom->q = q_hold; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp: In member function 'virtual void LAMMPS_NS::PairBeck::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp:282:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp:286:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&AA[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp:287:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&BB[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp:288:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aa[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp:289:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp:290:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&beta[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp:291:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp: In member function 'virtual void LAMMPS_NS::PairBeck::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp:321:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp:322:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp: In member function 'virtual void LAMMPS_NS::Pair::init_tables(double, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp:408:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized] if (msmflag) ftable[i] = qqrd2e/r * fgamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp:395:30: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] etable[i] = qqrd2e/r * egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp:399:30: warning: 'derfc' may be used uninitialized in this function [-Wmaybe-uninitialized] etable[i] = qqrd2e/r * derfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp:409:61: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized] else ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp:409:56: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized] else ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2); ^ [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp: In member function 'virtual void LAMMPS_NS::PairBorn::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:334:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:338:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:339:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&rho[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:340:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:341:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&c[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:342:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&d[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:343:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp: In member function 'virtual void LAMMPS_NS::PairBorn::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:374:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:375:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:376:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:377:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:366:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:370:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:371:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&rho[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:372:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:373:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&c[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:374:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&d[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:375:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:407:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:408:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:409:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:410:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:411:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:168:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:164:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:165:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:169:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] d[itype][jtype]*r6inv*r2inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:164:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulDSF::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:489:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:490:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:484:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:485:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:484:37: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:365:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:369:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:370:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&rho[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:371:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:372:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&c[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:373:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&d[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:374:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:406:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alf,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:407:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:408:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:409:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:410:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulWolf::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:487:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:488:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:482:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor * (erfcc-e_shift*r); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:483:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:482:41: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor * (erfcc-e_shift*r); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:171:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:168:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:172:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] d[itype][jtype]*r6inv*r2inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp: In member function 'virtual void LAMMPS_NS::PairBuck::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp:312:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp:316:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp:317:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&rho[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp:318:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&c[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp:319:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp: In member function 'virtual void LAMMPS_NS::PairBuck::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp:348:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp:349:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp:350:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp:351:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:366:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:370:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:371:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&rho[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:372:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&c[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:373:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:374:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:405:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:406:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:407:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:408:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:409:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulCut::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:467:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:467:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:146:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:146:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp:249:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp:252:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp:276:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp:277:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp:278:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_debye.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_debye.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDebye::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_debye.cpp:153:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_debye.cpp:154:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&kappa,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_debye.cpp:155:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_debye.cpp:156:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDSF::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp:257:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDSF::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp:281:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp:282:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp:283:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp:284:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_streitz.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_streitz.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_streitz.cpp [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulWolf::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp:254:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulWolf::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp:278:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alf,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp:279:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp:280:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp:281:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp: In member function 'virtual double LAMMPS_NS::PairCoulWolf::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp:318:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor * (erfcc-e_shift*r); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp:319:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp:318:41: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor * (erfcc-e_shift*r); ^ [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp: In member function 'virtual void LAMMPS_NS::PairDPD::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp:319:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp:323:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a0[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp:324:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&gamma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp:325:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp: In member function 'virtual void LAMMPS_NS::PairDPD::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp:353:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&temperature,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp:354:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp:355:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&seed,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp:356:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp: In member function 'virtual void LAMMPS_NS::PairDPDTstat::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp:234:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp:238:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&gamma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp:239:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp: In member function 'virtual void LAMMPS_NS::PairDPDTstat::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp:267:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&t_start,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp:268:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&t_stop,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp:269:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp:270:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&seed,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp:271:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp: In member function 'virtual void LAMMPS_NS::PairGauss::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp:285:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp:289:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp:290:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&b[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp:291:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp: In member function 'virtual void LAMMPS_NS::PairGauss::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp:318:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp:319:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp:320:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp:668:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nstyles,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp:685:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp:688:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(keywords[m],sizeof(char),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp:694:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp:698:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(special_lj[m],sizeof(double),4,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp:701:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp:705:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(special_coul[m],sizeof(double),4,fp); ^ [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid_overlay.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid_overlay.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid_overlay.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::coeff(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp:393:7: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized] int multflag; ^ [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid_overlay.cpp: In member function 'virtual void LAMMPS_NS::PairHybridOverlay::coeff(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid_overlay.cpp:47:7: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized] int multflag; ^ [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:612:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:616:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:617:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:618:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:647:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:648:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:649:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:650:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:283:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:287:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:288:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:289:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:290:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:317:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::compute_outer(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:394:44: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair = factor_lj*forcelj*r2inv; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:398:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl,0.0,fpair,delx,dely,delz); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp: In member function 'virtual double LAMMPS_NS::PairLJCubic::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:349:32: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] (PHIS + DPHIDS*t - A3*t*t*t/6.0); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:346:66: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:134:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] (PHIS + DPHIDS*t - A3*t*t*t/6.0); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:131:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]); ^ [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:606:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:610:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:611:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:612:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:641:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:642:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:643:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:644:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:357:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:361:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:362:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:363:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:364:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:394:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:395:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:396:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:397:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:398:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::compute_outer(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:388:44: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair = factor_lj*forcelj*r2inv; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:392:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl,0.0,fpair,delx,dely,delz); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulCut::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:453:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:140:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDebye::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:174:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:175:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:176:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&kappa,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:177:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:178:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:380:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:384:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:385:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:386:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:416:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:417:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:418:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:419:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:420:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:421:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulDebye::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:216:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:212:71: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:212:53: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDebye::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:110:72: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:110:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:113:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:168:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:169:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:162:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:168:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulDSF::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:465:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:465:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:465:37: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:459:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:375:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:379:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:380:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:381:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:412:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alf,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:413:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:414:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:415:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:416:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:417:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpand::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp:328:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp:332:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp:333:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp:334:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&shift[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp:335:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpand::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp:364:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp:365:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp:366:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp:367:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:172:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:165:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:345:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:349:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:350:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:351:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:352:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:382:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:383:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:384:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:385:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:383:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:387:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:388:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:417:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_inner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:418:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:419:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul_inner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:420:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:421:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:422:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp: In member function 'virtual double LAMMPS_NS::PairLJGromacs::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:439:65: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] phiswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:141:71: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t); ^ [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual double LAMMPS_NS::PairLJGromacsCoulGromacs::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:504:51: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized] (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:500:66: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:493:38: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized] tc*tc*tc * (coulsw3 + coulsw4*tc); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:160:58: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoulswitch = tc*tc*tc * (coulsw3 + coulsw4*tc); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:170:59: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized] (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:166:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:166:46: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:356:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:360:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:361:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:362:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:363:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:393:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:394:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:395:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:396:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmoothLinear::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp:287:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp:291:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp:292:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp:293:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmoothLinear::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp:320:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp:321:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp: In member function 'virtual double LAMMPS_NS::PairLJSmooth::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:454:30: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized] ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:453:60: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] ljsw2[itype][jtype]*tsq/2.0 - ljsw3[itype][jtype]*tsq*t/3.0 - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:449:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:144:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized] ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:143:68: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] ljsw2[itype][jtype]*tsq/2.0 - ljsw3[itype][jtype]*tsq*t/3.0 - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:139:27: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - ^ [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:633:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:637:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:638:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:639:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&gamR[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:640:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&gamA[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:641:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:672:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:673:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:674:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:675:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp: In member function 'virtual void LAMMPS_NS::PairMorse::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp:269:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp:273:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&d0[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp:274:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp:275:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp:276:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp: In member function 'virtual void LAMMPS_NS::PairMorse::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp:304:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp:305:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp:306:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::compute_outer(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:396:46: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair = factor_mie*forcemie*r2inv; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:400:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl,0.0,fpair,delx,dely,delz); ^ [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp:250:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp:254:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&prefactor[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp:255:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp:280:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp:281:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp: In member function 'void LAMMPS_NS::PairTable::read_table(LAMMPS_NS::PairTable::Table*, char*, char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:378:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); // no match, skip section ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:380:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:381:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:387:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:415:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp: In member function 'virtual void LAMMPS_NS::PairTable::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:977:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabstyle,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:978:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tablength,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:979:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ewaldflag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:980:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&pppmflag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:981:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&msmflag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:982:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&dispersionflag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:983:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tip4pflag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp: In member function 'virtual double LAMMPS_NS::PairTable::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:1042:41: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized] ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:1042:14: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized] ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:1039:35: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] phi = tb->e[itable] + fraction*tb->de[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp: In member function 'virtual void LAMMPS_NS::PairTable::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:177:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized] ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:177:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized] ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:174:45: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = tb->e[itable] + fraction*tb->de[itable]; ^ [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp: In member function 'virtual void LAMMPS_NS::PairUFM::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp:290:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp:294:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp:295:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp:296:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp: In member function 'virtual void LAMMPS_NS::PairUFM::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp:324:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp:325:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp:326:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp: In member function 'virtual void LAMMPS_NS::PairYukawa::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp:256:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp:260:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp:261:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp: In member function 'virtual void LAMMPS_NS::PairYukawa::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp:288:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&kappa,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp:289:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp:290:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp:291:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zbl.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zbl.cpp [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zero.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zero.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zero.cpp: In member function 'virtual void LAMMPS_NS::PairZero::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zero.cpp:176:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zero.cpp:180:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zero.cpp: In member function 'virtual void LAMMPS_NS::PairZero::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zero.cpp:205:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zero.cpp:206:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&coeffflag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zbl.cpp: In member function 'virtual void LAMMPS_NS::PairZBL::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zbl.cpp:142:53: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] (sw3[itype][jtype] + sw4[itype][jtype]*t); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zbl.cpp: In member function 'virtual double LAMMPS_NS::PairZBL::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zbl.cpp:290:45: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] (sw3[itype][jtype] + sw4[itype][jtype]*t); ^ [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/procmap.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/procmap.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/procmap.cpp [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/python.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/python.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/python.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/procmap.cpp: In member function 'void LAMMPS_NS::ProcMap::output(char*, int*, int***)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/procmap.cpp:687:16: warning: 'kme' may be used uninitialized in this function [-Wmaybe-uninitialized] vec[5] = kme + 1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/procmap.cpp:686:16: warning: 'jme' may be used uninitialized in this function [-Wmaybe-uninitialized] vec[4] = jme + 1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/procmap.cpp:685:16: warning: 'ime' may be used uninitialized in this function [-Wmaybe-uninitialized] vec[3] = ime + 1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/procmap.cpp: In member function 'int LAMMPS_NS::ProcMap::best_factors(int, int**, int*, int, int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/procmap.cpp:881:10: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized] return index; ^ [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/random_mars.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/random_mars.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/random_mars.cpp [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/random_park.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/random_park.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/random_park.cpp [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/rcb.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/rcb.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/rcb.cpp [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/read_data.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/read_data.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_data.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_data.cpp: In member function 'void LAMMPS_NS::ReadData::parse_keyword(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_data.cpp:1966:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if ((blank == strlen(line)) || (line[blank] == '#')) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/rcb.cpp: In member function 'void LAMMPS_NS::RCB::compute(int, int, double**, double*, double*, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/rcb.cpp:559:73: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized] if (readnumber == 2) MPI_Send(NULL,0,MPI_INT,procpartner2,0,world); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/rcb.cpp:487:29: warning: 'valuehalf_select' may be used uninitialized in this function [-Wmaybe-uninitialized] else lo[dim] = valuehalf; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/rcb.cpp: In member function 'void LAMMPS_NS::RCB::compute_old(int, int, double**, double*, double*, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/rcb.cpp:1051:73: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized] if (readnumber == 2) MPI_Send(NULL,0,MPI_INT,procpartner2,0,world); ^ [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/read_dump.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/read_dump.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_dump.cpp [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_dump.cpp: In member function 'LAMMPS_NS::bigint LAMMPS_NS::ReadDump::seek(LAMMPS_NS::bigint, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_dump.cpp:229:10: warning: 'ntimestep' may be used uninitialized in this function [-Wmaybe-uninitialized] bigint ntimestep; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_dump.cpp: In member function 'LAMMPS_NS::bigint LAMMPS_NS::ReadDump::next(LAMMPS_NS::bigint, LAMMPS_NS::bigint, int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_dump.cpp:299:5: warning: 'eofflag' may be used uninitialized in this function [-Wmaybe-uninitialized] if (eofflag) ntimestep = -1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_dump.cpp:271:10: warning: 'ntimestep' may be used uninitialized in this function [-Wmaybe-uninitialized] bigint ntimestep; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::file_search(char*, char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:630:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if (strlen(&ep->d_name[nbegin]) < n) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::command(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:304:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:308:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&procsperfile,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:311:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:315:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:321:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(buf,sizeof(double),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:381:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:384:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&procsperfile,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:393:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:397:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:403:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(buf,sizeof(double),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::file_layout()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:1087:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(all_written_send_sizes,sizeof(int),nprocs_file,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp: In member function 'char* LAMMPS_NS::ReadRestart::read_string()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:1269:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(value,sizeof(char),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::read_int_vec(int, int*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:1281:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(vec,sizeof(int),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::read_double_vec(int, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:1292:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(vec,sizeof(double),n,fp); ^ [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/reader.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/reader.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/reader.cpp [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/reader_native.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/reader_native.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/reader_native.cpp [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/reader_xyz.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/reader_xyz.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/reader_xyz.cpp [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/region.cpp [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_block.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_block.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_block.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/region.cpp: In member function 'int LAMMPS_NS::Region::surface(double, double, double, double)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/region.cpp:192:34: warning: 'xorig[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] contact[i].delz = xorig[2] - zs; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/region.cpp:191:34: warning: 'xorig[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] contact[i].dely = xorig[1] - ys; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/region.cpp:190:34: warning: 'xorig[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] contact[i].delx = xorig[0] - xs; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_block.cpp: In member function 'virtual int LAMMPS_NS::RegBlock::surface_exterior(double*, double)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_block.cpp:336:28: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized] add_contact(0,x,xp,yp,zp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_block.cpp:336:28: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_block.cpp:336:28: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cone.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cone.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cone.cpp [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cylinder.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cylinder.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cylinder.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cylinder.cpp: In member function 'virtual int LAMMPS_NS::RegCylinder::surface_exterior(double*, double)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cylinder.cpp:655:30: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized] add_contact(0,x,xp,yp,zp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cylinder.cpp:655:30: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cylinder.cpp:655:30: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_intersect.cpp.o [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_plane.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_intersect.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_intersect.cpp /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_plane.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_plane.cpp [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_prism.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_prism.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_prism.cpp [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_sphere.cpp [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_union.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_union.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_union.cpp [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/replicate.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/replicate.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/replicate.cpp [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/rerun.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/rerun.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/rerun.cpp [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/reset_ids.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/reset_ids.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/reset_ids.cpp [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/respa.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/respa.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/respa.cpp [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/run.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/run.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/run.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/run.cpp: In member function 'void LAMMPS_NS::Run::command(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/run.cpp:173:41: warning: 'stop' may be used uninitialized in this function [-Wmaybe-uninitialized] if (stopflag) update->endstep = stop; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/run.cpp:171:45: warning: 'start' may be used uninitialized in this function [-Wmaybe-uninitialized] if (startflag) update->beginstep = start; ^ [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/set.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/set.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/set.cpp [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/special.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/special.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/special.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/set.cpp: In member function 'void LAMMPS_NS::Set::set(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/set.cpp:909:35: warning: 'quat' may be used uninitialized in this function [-Wmaybe-uninitialized] quat[1] = xvalue * sintheta2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/set.cpp: In member function 'void LAMMPS_NS::Set::setrandom(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/set.cpp:1137:24: warning: 'quat' may be used uninitialized in this function [-Wmaybe-uninitialized] quat[1] = 0.0; ^ [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/thermo.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/thermo.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/thermo.cpp [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/timer.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/timer.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/timer.cpp [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/universe.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/universe.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/universe.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/universe.cpp: In member function 'void LAMMPS_NS::Universe::add_world(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/universe.cpp:190:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] } else if (strlen(str) == len-1) { ^ [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/update.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/update.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/update.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/universe.cpp: In member function 'void LAMMPS_NS::Universe::reorder(char*, char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/universe.cpp:149:38: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] MPI_Comm_split(uorig,0,key,&uworld); ^ [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::special_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:3962:16: warning: unused variable 'xvalue' [-Wunused-variable] double value,xvalue,sy,sxy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::next(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:681:33: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(fp,"%d",&nextindex); ^ [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::group_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:3926:39: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized] } else argstack[nargstack++] = value; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp: In member function 'double LAMMPS_NS::Variable::evaluate_boolean(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:4688:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized] int op,opprevious,flag1,flag2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::special_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:4000:20: warning: 'nstride' may be used uninitialized in this function [-Wmaybe-uninitialized] int index,nvec,nstride; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:4143:7: warning: 'nvec' may be used uninitialized in this function [-Wmaybe-uninitialized] for (int i = 0; i < nvec; i++) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:4188:5: warning: 'method' may be used uninitialized in this function [-Wmaybe-uninitialized] if (method == SLOPE) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp: In member function 'double LAMMPS_NS::Variable::evaluate(char*, LAMMPS_NS::Variable::Tree**, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:1180:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized] int op,opprevious; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp: In member function 'void LAMMPS_NS::Velocity::set(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:547:63: warning: 'zvar' may be used uninitialized in this function [-Wmaybe-uninitialized] else input->variable->compute_atom(zvar,igroup,NULL,3,0); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:542:63: warning: 'yvar' may be used uninitialized in this function [-Wmaybe-uninitialized] else input->variable->compute_atom(yvar,igroup,NULL,3,0); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:537:63: warning: 'xvar' may be used uninitialized in this function [-Wmaybe-uninitialized] else input->variable->compute_atom(xvar,igroup,NULL,3,0); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:460:17: warning: 'vz' may be used uninitialized in this function [-Wmaybe-uninitialized] vz *= zscale; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:456:17: warning: 'vy' may be used uninitialized in this function [-Wmaybe-uninitialized] vy *= yscale; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:452:17: warning: 'vx' may be used uninitialized in this function [-Wmaybe-uninitialized] vx *= xscale; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp: In member function 'void LAMMPS_NS::Velocity::ramp(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:650:3: warning: 'v_dim' may be used uninitialized in this function [-Wmaybe-uninitialized] if (v_dim == 2 && domain->dimension == 2) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:672:3: warning: 'coord_dim' may be used uninitialized in this function [-Wmaybe-uninitialized] if (coord_dim == 0) { ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:34:0: /builddir/build/BUILD/lammps-stable_22Aug2018/src/memory.h: In member function 'void LAMMPS_NS::Velocity::create(double, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/memory.h:172:5: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized] sfree(array[0]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:168:12: note: 'vhold' was declared here double **vhold; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp: In member function 'void LAMMPS_NS::Variable::compute_atom(int, int, double*, int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:1011:54: warning: 'vstore' may be used uninitialized in this function [-Wmaybe-uninitialized] if (mask[i] & groupbit) result[m] += vstore[i]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::math_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:3678:37: warning: 'value2' may be used uninitialized in this function [-Wmaybe-uninitialized] double value = value1 + value2*(1.0-cos(omega*delta*update->dt)); ^ [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/verlet.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/verlet.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/verlet.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:3672:38: warning: 'newtree' may be used uninitialized in this function [-Wmaybe-uninitialized] if (tree) newtree->type = CWIGGLE; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:3375:42: warning: 'value1' may be used uninitialized in this function [-Wmaybe-uninitialized] argstack[nargstack++] = sqrt(value1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp: In member function 'void LAMMPS_NS::Variable::set(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:185:9: warning: 'nfirst' may be used uninitialized in this function [-Wmaybe-uninitialized] int nfirst,nlast; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:206:22: warning: 'nlast' may be used uninitialized in this function [-Wmaybe-uninitialized] num[nvar] = nlast; ^ [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/write_coeff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/write_coeff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_coeff.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_coeff.cpp: In member function 'void LAMMPS_NS::WriteCoeff::command(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_coeff.cpp:97:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(str,256,one); // coeff ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_coeff.cpp:101:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(str,256,one); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_coeff.cpp:104:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(str,256,one); ^ [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/write_data.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/write_data.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_data.cpp [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/write_dump.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/write_dump.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_dump.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_dump.cpp: In member function 'void LAMMPS_NS::WriteDump::command(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_dump.cpp:84:16: warning: 'dump' may be used uninitialized in this function [-Wmaybe-uninitialized] dump->write(); ^ [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/write_restart.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/write_restart.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_restart.cpp [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_erotate_asphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_erotate_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_erotate_asphere.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_erotate_asphere.cpp: In member function 'virtual double LAMMPS_NS::ComputeERotateAsphere::compute_scalar()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_erotate_asphere.cpp:139:35: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertia[0] = tbonus[tri[i]].inertia[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_erotate_asphere.cpp:130:32: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] length = lbonus[line[i]].length; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_erotate_asphere.cpp:109:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_temp_asphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_temp_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_temp_asphere.cpp [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nh_asphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nh_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nh_asphere.cpp [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nph_asphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nph_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nph_asphere.cpp [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_npt_asphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_npt_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_npt_asphere.cpp [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_asphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_asphere.cpp [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_asphere_noforce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_asphere_noforce.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_asphere_noforce.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_asphere_noforce.cpp: In member function 'virtual void LAMMPS_NS::FixNVEAsphereNoforce::initial_integrate(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_asphere_noforce.cpp:94:33: warning: 'bonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = bonus[ellipsoid[i]].shape; ^ [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_line.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_line.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_line.cpp [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_tri.cpp [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nvt_asphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nvt_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nvt_asphere.cpp [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:467:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setwell[i],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:470:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&well[i][0],sizeof(double),3,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:474:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:478:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:479:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:480:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:512:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&gamma,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:513:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&upsilon,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:514:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mu,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:515:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:516:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:517:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_line_lj.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_line_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_line_lj.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp: In member function 'double LAMMPS_NS::PairGayBerne::gayberne_analytic(int, int, double (*)[3], double (*)[3], double (*)[3], double (*)[3], double (*)[3], double (*)[3], double*, double, double*, double*, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:730:36: warning: 'deta2[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:729:36: warning: 'deta2[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:728:36: warning: 'deta2[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:730:21: warning: 'dchi2[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:729:21: warning: 'dchi2[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:728:21: warning: 'dchi2[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:730:51: warning: '*((void*)& dUr2 +16)' may be used uninitialized in this function [-Wmaybe-uninitialized] rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:729:51: warning: '*((void*)& dUr2 +8)' may be used uninitialized in this function [-Wmaybe-uninitialized] rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:728:51: warning: 'dUr2' may be used uninitialized in this function [-Wmaybe-uninitialized] rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:220:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized] if (eflag) evdwl = factor_lj*one_eng; ^ [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp:445:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setwell[i],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp:448:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&well[i][0],sizeof(double),3,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp:452:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp:456:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp:457:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp:458:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp:486:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp:487:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_line_lj.cpp: In member function 'virtual void LAMMPS_NS::PairLineLJ::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_line_lj.cpp:308:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl,0.0,fpair,delx,dely,delz); ^ [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_tri_lj.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_tri_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_tri_lj.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp:195:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized] if (eflag) evdwl = factor_lj*one_eng; ^ [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_nparticle.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_nparticle.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_nparticle.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_tri_lj.cpp: In member function 'virtual void LAMMPS_NS::PairTriLJ::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_tri_lj.cpp:382:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl,0.0,fpair,delx,dely,delz); ^ [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polygon.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polygon.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polygon.cpp [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/compute_body_local.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/compute_body_local.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/compute_body_local.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp: In member function 'int LAMMPS_NS::BodyRoundedPolyhedron::nedges(LAMMPS_NS::AtomVecBody::Bonus*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp:99:7: warning: unused variable 'nfaces' [-Wunused-variable] int nfaces = bonus->ivalue[2]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp: In member function 'virtual int LAMMPS_NS::BodyRoundedPolyhedron::image(int, double, double, int*&, double**&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp:491:9: warning: unused variable 'nfaces' [-Wunused-variable] int nfaces = bonus->ivalue[2]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp:466:7: warning: unused variable 'j' [-Wunused-variable] int j, nelements; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::BodyRoundedPolyhedron::data_body(int, int, int, int*, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp:213:7: warning: 'nedges' may be used uninitialized in this function [-Wmaybe-uninitialized] int nedges,nentries; ^ [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/compute_temp_body.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/compute_temp_body.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/compute_temp_body.cpp [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nh_body.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nh_body.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nh_body.cpp [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nph_body.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nph_body.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nph_body.cpp [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_npt_body.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_npt_body.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_npt_body.cpp [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nve_body.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nve_body.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nve_body.cpp [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nvt_body.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nvt_body.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nvt_body.cpp [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp: In member function 'virtual void LAMMPS_NS::FixWallBodyPolygon::post_force(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:313:14: warning: unused variable 'r' [-Wunused-variable] double r = sqrt(rsq); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:314:14: warning: unused variable 'rsqinv' [-Wunused-variable] double rsqinv = 1.0 / rsq; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:338:11: warning: variable 'interact' set but not used [-Wunused-but-set-variable] int interact, num_contacts, done; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:209:59: warning: variable 'rradi' set but not used [-Wunused-but-set-variable] double vwall[3],dx,dy,dz,del1,del2,delxy,delr,rsq,eradi,rradi,wall_pos; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp: In member function 'int LAMMPS_NS::FixWallBodyPolygon::vertex_against_wall(int, double, double**, double**, double**, int, LAMMPS_NS::FixWallBodyPolygon::Contact*, int&, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:502:24: warning: unused variable 'p2vertex' [-Wunused-variable] int mode, contact, p2vertex; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:503:25: warning: unused variable 't' [-Wunused-variable] double d, R, hi[3], t, delx, dely, delz, fpair, shift; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:503:53: warning: unused variable 'shift' [-Wunused-variable] double d, R, hi[3], t, delx, dely, delz, fpair, shift; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:504:12: warning: unused variable 'xj' [-Wunused-variable] double xj[3], rij; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:481:18: warning: unused variable 'xpj' [-Wunused-variable] double xpi[3], xpj[3], dist, eradi, rradi; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:481:26: warning: unused variable 'dist' [-Wunused-variable] double xpi[3], xpj[3], dist, eradi, rradi; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:481:32: warning: variable 'eradi' set but not used [-Wunused-but-set-variable] double xpi[3], xpj[3], dist, eradi, rradi; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:482:22: warning: unused variable 'rx' [-Wunused-variable] double fx, fy, fz, rx, ry, rz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:482:26: warning: unused variable 'ry' [-Wunused-variable] double fx, fy, fz, rx, ry, rz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:482:30: warning: unused variable 'rz' [-Wunused-variable] double fx, fy, fz, rx, ry, rz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:483:7: warning: unused variable 'nlocal' [-Wunused-variable] int nlocal = atom->nlocal; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp: In member function 'void LAMMPS_NS::FixWallBodyPolygon::contact_forces(LAMMPS_NS::FixWallBodyPolygon::Contact&, double, double**, double**, double**, double**, double**, double*, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:674:28: warning: unused variable 'jefirst' [-Wunused-variable] int ibody,ibonus,ifirst, jefirst, ni; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::FixWallBodyPolyhedron::post_force(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:328:14: warning: unused variable 'r' [-Wunused-variable] double r = sqrt(rsq); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:329:14: warning: unused variable 'rsqinv' [-Wunused-variable] double rsqinv = 1.0 / rsq; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:362:11: warning: variable 'interact' set but not used [-Wunused-but-set-variable] int interact, num_contacts, done; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:362:35: warning: unused variable 'done' [-Wunused-variable] int interact, num_contacts, done; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:363:14: warning: unused variable 'delta_a' [-Wunused-variable] double delta_a, delta_ua, j_a; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:363:23: warning: unused variable 'delta_ua' [-Wunused-variable] double delta_a, delta_ua, j_a; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:363:33: warning: unused variable 'j_a' [-Wunused-variable] double delta_a, delta_ua, j_a; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:216:38: warning: unused variable 'delxy' [-Wunused-variable] double vwall[3],dx,dy,dz,del1,del2,delxy,delr,rsq,eradi,rradi,wall_pos; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:216:44: warning: unused variable 'delr' [-Wunused-variable] double vwall[3],dx,dy,dz,del1,del2,delxy,delr,rsq,eradi,rradi,wall_pos; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:216:53: warning: variable 'eradi' set but not used [-Wunused-but-set-variable] double vwall[3],dx,dy,dz,del1,del2,delxy,delr,rsq,eradi,rradi,wall_pos; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:216:59: warning: variable 'rradi' set but not used [-Wunused-but-set-variable] double vwall[3],dx,dy,dz,del1,del2,delxy,delr,rsq,eradi,rradi,wall_pos; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:217:35: warning: variable 'nfi' set but not used [-Wunused-but-set-variable] int i,ni,npi,ifirst,nei,iefirst,nfi,iffirst,side; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:217:39: warning: variable 'iffirst' set but not used [-Wunused-but-set-variable] int i,ni,npi,ifirst,nei,iefirst,nfi,iffirst,side; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp: In member function 'int LAMMPS_NS::FixWallBodyPolyhedron::edge_against_wall(int, double, int, double*, double**, double**, double**, LAMMPS_NS::FixWallBodyPolyhedron::Contact*, int&, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:551:16: warning: variable 'mode' set but not used [-Wunused-but-set-variable] int ni, nei, mode, contact; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:553:7: warning: unused variable 'nlocal' [-Wunused-variable] int nlocal = atom->nlocal; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp: In member function 'void LAMMPS_NS::FixWallBodyPolyhedron::contact_forces(int, double, double*, double*, double, double, double, double, double, double, double**, double**, double**, double**, double**, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:705:14: warning: unused variable 'jbonus' [-Wunused-variable] int ibonus,jbonus; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:708:28: warning: unused variable 'vj' [-Wunused-variable] double fn[3],ft[3],vi[3],vj[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp: In member function 'void LAMMPS_NS::FixWallBodyPolyhedron::contact_forces(LAMMPS_NS::FixWallBodyPolyhedron::Contact&, double, double**, double**, double**, double**, double**, double*, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:790:28: warning: unused variable 'jefirst' [-Wunused-variable] int ibody,ibonus,ifirst, jefirst, ni; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp: In member function 'virtual void LAMMPS_NS::FixWallBodyPolygon::post_force(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:345:71: warning: 'wall_pos' may be used uninitialized in this function [-Wmaybe-uninitialized] contact_list, num_contacts, facc); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:303:9: warning: 'eradi' may be used uninitialized in this function [-Wmaybe-uninitialized] if (delr > eradi) dz = cylradius; ^ [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_nparticle.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_nparticle.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_nparticle.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::FixWallBodyPolyhedron::post_force(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:342:79: warning: 'wall_pos' may be used uninitialized in this function [-Wmaybe-uninitialized] sphere_against_wall(i, wall_pos, side, vwall, x, v, f, angmom, torque); ^ [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolygon::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:247:11: warning: variable 'interact' set but not used [-Wunused-but-set-variable] int interact, num_contacts, done; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:108:46: warning: unused variable 'fx' [-Wunused-variable] double xtmp,ytmp,ztmp,delx,dely,delz,evdwl,fx,fy,fz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:108:49: warning: unused variable 'fy' [-Wunused-variable] double xtmp,ytmp,ztmp,delx,dely,delz,evdwl,fx,fy,fz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:108:52: warning: unused variable 'fz' [-Wunused-variable] double xtmp,ytmp,ztmp,delx,dely,delz,evdwl,fx,fy,fz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:109:14: warning: variable 'rsqinv' set but not used [-Wunused-but-set-variable] double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:109:33: warning: variable 'eradi' set but not used [-Wunused-but-set-variable] double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:109:39: warning: variable 'eradj' set but not used [-Wunused-but-set-variable] double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:109:45: warning: variable 'rradi' set but not used [-Wunused-but-set-variable] double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:109:51: warning: variable 'rradj' set but not used [-Wunused-but-set-variable] double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:110:10: warning: unused variable 'xi' [-Wunused-variable] double xi[3],xj[3],fi[3],fj[3],ti[3],tj[3],facc[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:110:16: warning: unused variable 'xj' [-Wunused-variable] double xi[3],xj[3],fi[3],fj[3],ti[3],tj[3],facc[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:110:22: warning: unused variable 'fi' [-Wunused-variable] double xi[3],xj[3],fi[3],fj[3],ti[3],tj[3],facc[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:110:28: warning: unused variable 'fj' [-Wunused-variable] double xi[3],xj[3],fi[3],fj[3],ti[3],tj[3],facc[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:110:34: warning: unused variable 'ti' [-Wunused-variable] double xi[3],xj[3],fi[3],fj[3],ti[3],tj[3],facc[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:110:40: warning: unused variable 'tj' [-Wunused-variable] double xi[3],xj[3],fi[3],fj[3],ti[3],tj[3],facc[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:111:11: warning: unused variable 'dxi' [-Wunused-variable] double *dxi,*dxj; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:111:16: warning: unused variable 'dxj' [-Wunused-variable] double *dxi,*dxj; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolygon::sphere_against_sphere(int, int, double, double, double, double, double, double, double**, double**, double**, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:604:10: warning: variable 'eradi' set but not used [-Wunused-but-set-variable] double eradi,eradj,rradi,rradj; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:604:16: warning: variable 'eradj' set but not used [-Wunused-but-set-variable] double eradi,eradj,rradi,rradj; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:606:32: warning: variable 'fn' set but not used [-Wunused-but-set-variable] double rij,rsqinv,R,fx,fy,fz,fn[3],ft[3],fpair,shift,energy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:606:38: warning: variable 'ft' set but not used [-Wunused-but-set-variable] double rij,rsqinv,R,fx,fy,fz,fn[3],ft[3],fpair,shift,energy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp: In member function 'int LAMMPS_NS::PairBodyRoundedPolygon::vertex_against_edge(int, int, double, double, double**, double**, double**, LAMMPS_NS::tagint*, LAMMPS_NS::PairBodyRoundedPolygon::Contact*, int&, double&, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:761:12: warning: unused variable 'xj' [-Wunused-variable] double xj[3], rij; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:709:24: warning: variable 'nei' set but not used [-Wunused-but-set-variable] int ni, npi, ifirst, nei, iefirst; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:709:29: warning: variable 'iefirst' set but not used [-Wunused-but-set-variable] int ni, npi, ifirst, nei, iefirst; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:710:11: warning: variable 'npj' set but not used [-Wunused-but-set-variable] int nj, npj, jfirst, nej, jefirst; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:711:32: warning: variable 'eradi' set but not used [-Wunused-but-set-variable] double xpi[3], xpj[3], dist, eradi, eradj, rradi, rradj; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:712:22: warning: unused variable 'rx' [-Wunused-variable] double fx, fy, fz, rx, ry, rz, energy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:712:26: warning: unused variable 'ry' [-Wunused-variable] double fx, fy, fz, rx, ry, rz, energy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:712:30: warning: unused variable 'rz' [-Wunused-variable] double fx, fy, fz, rx, ry, rz, energy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:714:7: warning: unused variable 'nlocal' [-Wunused-variable] int nlocal = atom->nlocal; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_nparticle.cpp: In member function 'virtual void LAMMPS_NS::PairBodyNparticle::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_nparticle.cpp:328:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl,0.0,fpair,delx,dely,delz); ^ [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolygon::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:107:15: warning: 'iefirst' may be used uninitialized in this function [-Wmaybe-uninitialized] int nei,nej,iefirst,jefirst; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:235:7: warning: 'nei' may be used uninitialized in this function [-Wmaybe-uninitialized] for (ni = 0; ni < nei; ni++) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:106:21: warning: 'ifirst' may be used uninitialized in this function [-Wmaybe-uninitialized] int ni,nj,npi,npj,ifirst,jfirst; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:223:7: warning: 'npi' may be used uninitialized in this function [-Wmaybe-uninitialized] for (ni = 0; ni < npi; ni++) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolyhedron::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:278:11: warning: variable 'interact' set but not used [-Wunused-but-set-variable] int interact, num_contacts; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolyhedron::sphere_against_sphere(int, int, int, int, double, double, double, double, double**, double**, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:606:50: warning: unused variable 'shift' [-Wunused-variable] double rij,rsqinv,R,fx,fy,fz,fn[3],ft[3],fpair,shift,energy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolyhedron::sphere_against_edge(int, int, int, int, double**, double**, double**, double**, double**, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:688:57: warning: unused variable 'shift' [-Wunused-variable] double delx,dely,delz,rsq,rij,rsqinv,R,fx,fy,fz,fpair,shift,energy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolyhedron::sphere_against_face(int, int, int, int, double**, double**, double**, double**, double**, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:838:57: warning: unused variable 'shift' [-Wunused-variable] double delx,dely,delz,rsq,rij,rsqinv,R,fx,fy,fz,fpair,shift,energy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'int LAMMPS_NS::PairBodyRoundedPolyhedron::edge_against_edge(int, int, int, int, double**, LAMMPS_NS::PairBodyRoundedPolyhedron::Contact*, int&, double&, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:991:21: warning: unused variable 'contact' [-Wunused-variable] int ni,nei,nj,nej,contact,interact; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'int LAMMPS_NS::PairBodyRoundedPolyhedron::edge_against_face(int, int, int, int, double**, LAMMPS_NS::PairBodyRoundedPolyhedron::Contact*, int&, double&, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:1048:21: warning: unused variable 'contact' [-Wunused-variable] int ni,nei,nj,nfj,contact,interact; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'int LAMMPS_NS::PairBodyRoundedPolyhedron::interaction_edge_to_edge(int, int, double*, double, int, int, double*, double, int, int, double, LAMMPS_NS::PairBodyRoundedPolyhedron::Contact*, int&, double&, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:1121:24: warning: unused variable 'shift' [-Wunused-variable] double contact_dist, shift; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'int LAMMPS_NS::PairBodyRoundedPolyhedron::interaction_face_to_edge(int, int, double*, double, int, int, double*, double, int, int, double, LAMMPS_NS::PairBodyRoundedPolyhedron::Contact*, int&, double&, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:1317:48: warning: unused variable 'shift' [-Wunused-variable] double hi1[3], hi2[3], d1, d2, contact_dist, shift; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolyhedron::sanity_check()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:2348:22: warning: variable 'x3' set but not used [-Wunused-but-set-variable] double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b,u[3],v[3],n[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:2348:28: warning: variable 'x4' set but not used [-Wunused-but-set-variable] double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b,u[3],v[3],n[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:2348:56: warning: unused variable 'u' [-Wunused-variable] double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b,u[3],v[3],n[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:2348:61: warning: unused variable 'v' [-Wunused-variable] double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b,u[3],v[3],n[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:2348:66: warning: unused variable 'n' [-Wunused-variable] double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b,u[3],v[3],n[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:2350:7: warning: unused variable 'inside_a' [-Wunused-variable] int inside_a, inside_b; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:2350:17: warning: unused variable 'inside_b' [-Wunused-variable] int inside_a, inside_b; ^ [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp: In member function 'virtual void LAMMPS_NS::AngleClass2::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:376:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&theta0[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:377:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k2[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:378:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k3[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:379:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k4[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:381:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bb_k[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:382:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bb_r1[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:383:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bb_r2[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:385:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ba_k1[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:386:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ba_k2[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:387:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ba_r1[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:388:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ba_r2[1],sizeof(double),atom->nangletypes,fp); ^ [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/bond_class2.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/bond_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/bond_class2.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolyhedron::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:222:21: warning: 'eradi' may be used uninitialized in this function [-Wmaybe-uninitialized] if (r > eradi + eradj + cut_inner) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:124:43: warning: 'iefirst' may be used uninitialized in this function [-Wmaybe-uninitialized] int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:248:7: warning: 'nei' may be used uninitialized in this function [-Wmaybe-uninitialized] for (ni = 0; ni < nei; ni++) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:124:21: warning: 'ifirst' may be used uninitialized in this function [-Wmaybe-uninitialized] int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:234:7: warning: 'npi' may be used uninitialized in this function [-Wmaybe-uninitialized] for (ni = 0; ni < npi; ni++) { ^ [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/bond_class2.cpp: In member function 'virtual void LAMMPS_NS::BondClass2::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/bond_class2.cpp:187:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/bond_class2.cpp:188:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k2[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/bond_class2.cpp:189:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k3[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/bond_class2.cpp:190:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k4[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp: In member function 'virtual void LAMMPS_NS::DihedralClass2::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:840:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:841:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:842:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k3[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:843:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&phi1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:844:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&phi2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:845:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&phi3[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:847:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mbt_f1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:848:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mbt_f2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:849:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mbt_f3[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:850:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mbt_r0[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:852:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ebt_f1_1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:853:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ebt_f2_1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:854:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ebt_f3_1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:855:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ebt_r0_1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:857:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ebt_f1_2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:858:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ebt_f2_2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:859:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ebt_f3_2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:860:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ebt_r0_2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:862:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&at_f1_1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:863:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&at_f2_1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:864:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&at_f3_1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:865:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&at_theta0_1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:867:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&at_f1_2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:868:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&at_f2_2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:869:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&at_f3_2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:870:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&at_theta0_2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:872:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aat_k[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:873:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aat_theta0_1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:874:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aat_theta0_2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:876:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bb13t_k[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:877:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bb13t_r10[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:878:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bb13t_r30[1],sizeof(double),atom->ndihedraltypes,fp); ^ [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp: In member function 'virtual void LAMMPS_NS::ImproperClass2::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp:609:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k0[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp:610:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&chi0[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp:612:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aa_k1[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp:613:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aa_k2[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp:614:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aa_k3[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp:615:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aa_theta0_1[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp:616:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aa_theta0_2[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp:617:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aa_theta0_3[1],sizeof(double),atom->nimpropertypes,fp); ^ [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp: In member function 'void LAMMPS_NS::ImproperClass2::angleangle(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp:825:58: warning: 'eimproper' may be used uninitialized in this function [-Wmaybe-uninitialized] delxBD-delxBC,delyBD-delyBC,delzBD-delzBC); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp:310:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp:314:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp:315:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp:316:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp:345:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp:346:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp:347:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp:348:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:364:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:368:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:369:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:370:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:371:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:401:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:402:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:403:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:404:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:405:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulCut::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:462:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:462:37: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:144:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:144:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:406:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:410:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:411:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:412:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:443:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:444:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:445:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:446:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:447:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:448:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:449:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/fix_wall_colloid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/fix_wall_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/fix_wall_colloid.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulLong::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:538:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:538:37: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:531:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:531:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:534:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:529:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:177:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:182:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:185:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:185:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:179:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:179:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:610:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:614:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:615:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:650:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mu,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:651:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flaglog,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:652:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flagfld,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:653:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:654:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:655:42: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&t_target, sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:656:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&seed, sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:657:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:658:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:659:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flagHI,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:660:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flagVF,sizeof(int),1,fp); ^ [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian_poly.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian_poly.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:309:42: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized] Fbmag = prethermostat*sqrt(a_pu); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:241:42: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized] Fbmag = prethermostat*sqrt(a_sh); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian_poly.cpp: In member function 'virtual void LAMMPS_NS::PairBrownianPoly::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian_poly.cpp:296:42: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized] Fbmag = prethermostat*sqrt(a_pu); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian_poly.cpp:245:42: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized] Fbmag = prethermostat*sqrt(a_sh); ^ [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:401:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (comm->me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:405:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a12[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:406:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:407:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&d1[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:408:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&d2[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:409:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:439:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:440:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:441:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp: In member function 'virtual void LAMMPS_NS::PairLubricate::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:690:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:694:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:695:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp: In member function 'virtual void LAMMPS_NS::PairLubricate::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:728:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mu,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:729:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flaglog,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:730:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flagfld,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:731:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:732:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:733:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:734:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:735:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flagHI,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:736:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flagVF,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp: In member function 'virtual double LAMMPS_NS::PairColloid::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:544:20: warning: 'phi' may be used uninitialized in this function [-Wmaybe-uninitialized] return factor_lj*phi; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:195:22: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] f[i][2] += delz*fpair; ^ [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU_poly.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU_poly.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp: In member function 'virtual void LAMMPS_NS::PairLubricateU::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1917:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1921:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1922:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp: In member function 'virtual void LAMMPS_NS::PairLubricateU::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1954:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mu,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1955:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flaglog,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1956:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1957:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1958:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1959:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1960:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flagHI,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1961:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flagVF,sizeof(int),1,fp); ^ [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate_poly.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate_poly.cpp [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_yukawa_colloid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_yukawa_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_yukawa_colloid.cpp [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/atom_vec_dipole.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/atom_vec_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/atom_vec_dipole.cpp [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:441:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:445:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:446:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:447:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:448:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:477:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:478:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:479:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:480:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:240:34: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += qtmp*r3inv*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:238:35: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += -q[j]*r3inv*pidotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:236:29: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:236:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:240:28: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += qtmp*r3inv*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:245:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:495:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:499:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:500:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:501:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:529:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:530:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:531:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:532:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongDipoleLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:351:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:355:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:356:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:357:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongDipoleLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:386:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:387:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:388:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:389:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:390:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ewald_order,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:297:70: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:297:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:297:54: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:294:47: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:294:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:294:31: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:297:70: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:297:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:297:54: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:302:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_freeze.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_freeze.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_freeze.cpp [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_pour.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_pour.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_pour.cpp [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_wall_gran.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_wall_gran.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_wall_gran.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_pour.cpp: In member function 'virtual void LAMMPS_NS::FixPour::pre_exchange()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_pour.cpp:676:42: warning: 'natom' may be used uninitialized in this function [-Wmaybe-uninitialized] int ninserted_mols = ninserted_atoms / natom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_pour.cpp:692:35: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] atom->nbonds += onemols[imol]->nbonds * ninserted_mols; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_pour.cpp:650:65: warning: 'denstmp' may be used uninitialized in this function [-Wmaybe-uninitialized] atom->rmass[n] = 4.0*MY_PI/3.0 * radtmp*radtmp*radtmp * denstmp; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_pour.cpp:499:30: warning: 'radtmp' may be used uninitialized in this function [-Wmaybe-uninitialized] coords[0][3] = radtmp; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_wall_gran.cpp: In member function 'void LAMMPS_NS::FixWallGran::bonded_history(double, double, double, double, double*, double, double*, double*, double*, double*, double, double, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_wall_gran.cpp:797:56: warning: variable 'vrlmaginv' set but not used [-Wunused-but-set-variable] double relrot1,relrot2,relrot3,vrl1,vrl2,vrl3,vrlmag,vrlmaginv; ^ [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_wall_gran_region.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_wall_gran_region.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_wall_gran_region.cpp [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hertz_history.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hertz_history.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hertz_history.cpp [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke.cpp [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp: In member function 'virtual void LAMMPS_NS::PairGranHookeHistory::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp:540:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp: In member function 'virtual void LAMMPS_NS::PairGranHookeHistory::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp:566:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&kn,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp:567:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&kt,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp:568:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&gamman,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp:569:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&gammat,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp:570:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&xmu,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp:571:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&dampflag,sizeof(int),1,fp); ^ [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/ewald.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/ewald.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/ewald.cpp [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/ewald_disp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/ewald_disp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/ewald_disp.cpp [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d.cpp: In function 'void fft_3d(double (*)[2], double (*)[2], int, fft_plan_3d*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d.cpp:69:9: warning: variable 'total' set but not used [-Wunused-but-set-variable] int i,total,length,offset,num; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d.cpp:69:15: warning: variable 'length' set but not used [-Wunused-but-set-variable] int i,total,length,offset,num; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d.cpp:69:22: warning: unused variable 'offset' [-Wunused-variable] int i,total,length,offset,num; ^ [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d_wrap.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d_wrap.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d_wrap.cpp [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fix_tune_kspace.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fix_tune_kspace.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fix_tune_kspace.cpp [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/gridcomm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/gridcomm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/gridcomm.cpp [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm_cg.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm_cg.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm_cg.cpp [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp: In member function 'virtual void LAMMPS_NS::MSM::direct(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1640:47: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v5sum += v5_directn[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1639:47: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v4sum += v4_directn[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1638:47: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v3sum += v3_directn[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1637:47: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v2sum += v2_directn[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1636:47: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v1sum += v1_directn[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1635:47: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v0sum += v0_directn[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp: In member function 'void LAMMPS_NS::MSM::direct_top(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1995:50: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v5sum += v5_direct_top[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1994:50: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v4sum += v4_direct_top[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1993:50: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v3sum += v3_direct_top[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1992:50: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v2sum += v2_direct_top[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1991:50: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v1sum += v1_direct_top[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1990:50: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v0sum += v0_direct_top[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:427:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:431:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:432:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&rho[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:433:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:434:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&c[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:435:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&d[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:436:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:470:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:471:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:472:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:473:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:474:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:475:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:476:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulLong::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:568:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:569:28: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] d[itype][jtype]*r2inv*r6inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:561:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:561:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:564:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:559:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:191:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:183:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:188:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:192:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:185:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:185:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:404:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:408:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:409:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&rho[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:410:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&c[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:411:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:443:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:444:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:445:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:446:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:447:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:448:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:449:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulMSM::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp:189:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp:186:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp:185:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp:190:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulMSM::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp:248:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp:249:28: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] d[itype][jtype]*r2inv*r6inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp:244:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp:243:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulLong::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:539:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:539:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:532:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:532:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:535:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:530:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:184:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:176:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:181:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:184:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:178:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:178:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckLongCoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:360:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:364:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&buck_a_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:365:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&buck_rho_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:366:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&buck_c_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:367:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_buck_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckLongCoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:399:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_buck_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:400:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:401:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:402:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:403:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:404:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:405:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ewald_order,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulMSM::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp:185:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp:182:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp:181:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp:185:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulMSM::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp:243:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp:243:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp:239:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp:238:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*egamma; ^ [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:297:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:300:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&scale[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:326:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:327:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:328:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:329:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:330:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairCoulLong::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:377:29: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:379:26: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:379:38: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:377:29: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:161:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:166:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:163:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:163:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:830:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:834:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:835:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:836:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&eps14[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:837:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma14[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:869:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_inner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:870:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:871:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:872:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:873:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:874:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:875:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairCoulMSM::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp:152:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp:147:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp:149:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp:149:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairCoulMSM::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp:207:31: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp:209:26: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp:209:38: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp:207:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*egamma; ^ [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulLong::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:974:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:966:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:966:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:969:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:964:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::compute_outer(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:549:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * (erfc + EWALD_F*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:521:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:549:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * (erfc + EWALD_F*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:549:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * (erfc + EWALD_F*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:555:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = ptable[itable] + fraction*dptable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:552:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = vtable[itable] + fraction*dvtable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:197:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:202:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:206:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:199:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:199:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:206:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulMSM::compute_outer(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:387:39: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:415:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * fgamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:387:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:421:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = ptable[itable] + fraction*dptable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:418:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = vtable[itable] + fraction*dvtable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulMSM::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:524:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:516:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:516:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:519:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:514:33: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulMSM::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:217:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:212:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:221:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:214:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:214:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:221:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:900:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:904:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:905:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:906:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&eps14[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:907:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma14[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:939:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_inner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:940:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:941:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:942:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:943:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:944:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:945:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:800:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:804:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:805:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:806:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:837:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:838:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:839:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:840:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:841:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:842:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:843:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmfswCoulLong::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1053:34: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj6 = -lj4[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1048:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1036:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1036:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1039:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1034:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::compute_outer(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:611:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * (erfc + EWALD_F*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:573:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:611:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * (erfc + EWALD_F*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:611:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * (erfc + EWALD_F*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:633:76: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] forcelj = r6inv * (lj1[itype][jtype]*r6inv - lj2[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:590:27: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] rinv = 1.0/r; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:617:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = ptable[itable] + fraction*dptable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:614:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = vtable[itable] + fraction*dvtable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:219:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:224:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:240:42: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl6 = -lj4[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:221:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:221:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:238:47: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl12 = r6inv*lj3[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulLong::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:934:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:926:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:926:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:929:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:924:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::compute_outer(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:537:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * (erfc + EWALD_F*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:513:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:537:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * (erfc + EWALD_F*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:537:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * (erfc + EWALD_F*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:543:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = ptable[itable] + fraction*dptable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:540:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = vtable[itable] + fraction*dvtable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:183:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:188:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:192:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:185:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:185:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:537:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeO,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:538:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeH,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:539:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeB,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:540:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeA,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:541:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&qdist,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:543:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:544:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:545:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:546:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:547:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:548:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:549:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulMSM::compute_outer(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:366:39: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:390:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * fgamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:366:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:396:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = ptable[itable] + fraction*dptable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:393:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = vtable[itable] + fraction*dvtable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulMSM::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:476:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:468:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:468:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:471:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:466:33: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulMSM::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:209:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:204:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:213:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:206:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:206:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:415:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:420:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:417:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:410:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:409:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:337:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:333:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:417:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongCoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:360:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:364:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:365:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:366:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongCoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:397:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:398:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:399:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:400:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:401:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:402:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:403:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ewald_order,sizeof(int),1,fp); ^ [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1549:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeO,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1550:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeH,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1551:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeB,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1552:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeA,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1553:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&qdist,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1555:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1556:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1557:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1558:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1559:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1560:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_middle()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:980:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:976:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:949:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:945:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fH[0]; ^ [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:451:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:456:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:453:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:446:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:445:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:373:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:369:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:453:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_inner()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:719:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:715:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:688:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:684:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:476:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeO,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:477:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeH,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:478:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeB,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:479:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeA,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:480:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&qdist,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_outer(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1422:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1421:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1323:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1319:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fH[0]; ^ [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:383:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:388:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:385:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:378:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:377:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:305:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:301:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:385:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_cg.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_cg.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_cg.cpp [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_disp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_disp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_disp.cpp [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_disp_tip4p.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_disp_tip4p.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_disp_tip4p.cpp [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_stagger.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_stagger.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_stagger.cpp [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_tip4p.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_tip4p.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_tip4p.cpp [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/remap.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/remap.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/remap.cpp [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/remap_wrap.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/remap_wrap.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/remap_wrap.cpp [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/fix_qeq_comb.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/fix_qeq_comb.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/fix_qeq_comb.cpp [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/fix_qeq_comb.cpp: In member function 'virtual void LAMMPS_NS::FixQEQComb::post_force(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/fix_qeq_comb.cpp:262:20: warning: 'ilist' may be used uninitialized in this function [-Wmaybe-uninitialized] i = ilist[ii]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/fix_qeq_comb.cpp:224:5: warning: 'inum' may be used uninitialized in this function [-Wmaybe-uninitialized] for (ii = 0; ii < inum; ii++) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp: In member function 'void LAMMPS_NS::PairADP::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp:564:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp:565:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp:566:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp:567:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp:592:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp:616:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp: In member function 'void LAMMPS_NS::PairADP::grab(FILE*, int, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp:928:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3385:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3391:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3393:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3395:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3397:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3399:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3401:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3403:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3405:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3407:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3409:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3411:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3413:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3415:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3417:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3419:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3421:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3423:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3425:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3427:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3429:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3431:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3433:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3435:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3437:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3439:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3441:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3443:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3445:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3447:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3449:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3451:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3453:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3455:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3457:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3459:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3461:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3463:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3465:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3467:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3469:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3471:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3473:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3475:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3477:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3482:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3484:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3486:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3488:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3490:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3492:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3494:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3496:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3498:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3500:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3502:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3504:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3506:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3508:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3510:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3512:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3514:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3516:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3518:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3520:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3522:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3527:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3529:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3531:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3533:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3535:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3537:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3539:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3541:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3543:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3550:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3551:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3552:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3556:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3560:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3563:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3566:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3570:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3573:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3580:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3581:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3582:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3584:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3588:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3592:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3596:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3603:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3604:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3605:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3607:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3612:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3616:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3621:30: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3629:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3630:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3631:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3632:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3637:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3641:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3646:30: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3654:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3655:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3656:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3658:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3663:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3667:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3673:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3682:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3683:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3684:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3686:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3691:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3695:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3701:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3710:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3711:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3712:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3714:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3719:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3723:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3729:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3738:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3739:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3740:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3742:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3747:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3751:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3757:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp: In member function 'void LAMMPS_NS::PairADP::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp:629:57: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized] if (me == 0) grab(fp,file->nr,&file->z2r[i][j][1]); ^ [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo_morse.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo_morse.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::TORSION(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:1244:64: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] ev_tally4(i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl); ^ [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_bop.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_bop.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_bop.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::Spbicubic(double, double, double*, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:4025:49: warning: 'yn1' may be used uninitialized in this function [-Wmaybe-uninitialized] if (j > 0) df[1] += c * ((double) j) * xn * yn1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::Sptricubic(double, double, double, double*, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:4065:46: warning: 'zn1' may be used uninitialized in this function [-Wmaybe-uninitialized] if (k > 0) df[2] += c * kr * xn * yn * zn1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::piRCSpline(double, double, double, int, int, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3286:10: warning: 'piRC' may be used uninitialized in this function [-Wmaybe-uninitialized] return piRC; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_bop.cpp: In member function 'void LAMMPS_NS::PairBOP::read_table(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_bop.cpp:4991:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for(j=0;jnr,&file->z2r[i][j][1]); ^ [ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_cd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_cd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_cd.cpp [ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFS::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp:143:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp:168:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp:194:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_cd.cpp: In member function 'virtual void LAMMPS_NS::PairEAMCD::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_cd.cpp:388:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair += D_i * rhojp * t1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp:210:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized] if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]); ^ [ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eim.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eim.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eim.cpp [ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_gw.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_gw.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_gw.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eim.cpp: In member function 'int LAMMPS_NS::PairEIM::grabpair(FILE*, int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eim.cpp:971:35: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eim.cpp:975:35: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ [ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_gw_zbl.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_gw_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_gw_zbl.cpp [ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp: In member function 'void LAMMPS_NS::PairLCBOP::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:988:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:994:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&r_1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:995:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&r_2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:996:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&gamma_1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:997:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&A); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:998:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&B_1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:999:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&B_2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1000:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&alpha); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1001:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&beta_1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1002:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&beta_2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1003:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&d); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1004:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&C_1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1005:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&C_4); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1006:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&C_6); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1007:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&L); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1008:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&kappa); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1009:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&R_0); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1010:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&R_1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1011:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&r_0); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1012:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&r_1_LR); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1013:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&r_2_LR); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1014:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&v_1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1015:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&v_2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1016:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&eps_1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1017:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&eps_2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1018:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&lambda_1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1019:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&lambda_2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1020:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&eps); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1021:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&delta); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1024:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1033:30: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1040:40: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] while (1) { fgets(s,MAXLINE,fp); if (s[0] != '#') break; } ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1047:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1053:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ [ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_nb3b_harmonic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_nb3b_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_nb3b_harmonic.cpp [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_rebo.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_rebo.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_rebo.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp: In member function 'virtual void LAMMPS_NS::PairPolymorphic::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:580:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:581:60: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] while (line == strchr(line,'#')) fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:597:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:615:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:651:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp: In member function 'void LAMMPS_NS::PairPolymorphic::grab(FILE*, int, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:882:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp: In member function 'virtual void LAMMPS_NS::PairPolymorphic::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:263:7: warning: 'emb' may be used uninitialized in this function [-Wmaybe-uninitialized] if (emb > epsilon) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:291:82: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally(i,i,nlocal,newton_pair,evdwl,0.0,0.0,delx,dely,delz); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:291:82: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:291:82: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_sw.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_sw.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_sw.cpp [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff.cpp [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff_mod.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff_mod.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff_mod.cpp [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff_mod_c.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff_mod_c.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff_mod_c.cpp [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff_zbl.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff_zbl.cpp [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_vashishta.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_vashishta.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_vashishta.cpp [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_vashishta_table.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_vashishta_table.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_vashishta_table.cpp [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_atom_swap.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_atom_swap.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_atom_swap.cpp [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_break.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_break.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_break.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_atom_swap.cpp: In member function 'int LAMMPS_NS::FixAtomSwap::attempt_semi_grand()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_atom_swap.cpp:391:54: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized] atom->v[i][0] *= sqrt_mass_ratio[itype][jtype]; ^ [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_create.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_create.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_create.cpp [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp: In member function 'virtual void LAMMPS_NS::FixBondSwap::post_integrate()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:629:44: warning: 'jlast' may be used uninitialized in this function [-Wmaybe-uninitialized] for (jangle = 0; jangle < num_angle[jlast]; jangle++) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:607:44: warning: 'jprev' may be used uninitialized in this function [-Wmaybe-uninitialized] for (jangle = 0; jangle < num_angle[jprev]; jangle++) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:202:25: warning: 'jnext' may be used uninitialized in this function [-Wmaybe-uninitialized] int inext,iprev,ilast,jnext,jprev,jlast,ibond,iangle,jbond,jangle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:618:44: warning: 'ilast' may be used uninitialized in this function [-Wmaybe-uninitialized] for (iangle = 0; iangle < num_angle[ilast]; iangle++) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:491:39: warning: 'iprev' may be used uninitialized in this function [-Wmaybe-uninitialized] if (iprev >= 0) iprevtag = tag[iprev]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:202:7: warning: 'inext' may be used uninitialized in this function [-Wmaybe-uninitialized] int inext,iprev,ilast,jnext,jprev,jlast,ibond,iangle,jbond,jangle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:414:53: warning: 'jnextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized] angle_eng(jnextangletype,i,jnext,jlast) + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:419:49: warning: 'jangletype' may be used uninitialized in this function [-Wmaybe-uninitialized] angle_eng(jangletype,jprev,j,jnext) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:418:53: warning: 'inextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized] angle_eng(inextangletype,i,inext,ilast) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:413:56: warning: 'iangletype' may be used uninitialized in this function [-Wmaybe-uninitialized] delta += angle_eng(iangletype,iprev,i,jnext) + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:457:37: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized] for (jbond = 0; jbond < num_bond[j]; jbond++) ^ [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_gcmc.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_gcmc.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_gcmc.cpp [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_tfmc.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_tfmc.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_tfmc.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_tfmc.cpp: In member function 'virtual void LAMMPS_NS::FixTFMC::initial_integrate(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_tfmc.cpp:255:36: warning: 'masstotal' may be used uninitialized in this function [-Wmaybe-uninitialized] group->xcm(igroup,masstotal,cm); ^ [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_gcmc.cpp: In member function 'double LAMMPS_NS::FixGCMC::energy_full()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_gcmc.cpp:2296:11: warning: 'imolecule' may be used uninitialized in this function [-Wmaybe-uninitialized] if (imolecule == molecule[j]) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp: In member function 'virtual void LAMMPS_NS::PairDSMC::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp:350:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp:354:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp:355:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp: In member function 'virtual void LAMMPS_NS::PairDSMC::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp:383:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp:384:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&max_cell_size,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp:385:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&seed,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp:386:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp:387:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/compute_msd_nongauss.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/compute_msd_nongauss.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/compute_msd_nongauss.cpp [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/compute_ti.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/compute_ti.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/compute_ti.cpp [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp: In function 'int sizeofint(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:559:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] while (size >= num && num_of_bits < 32) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp: In function 'int sizeofints(int, unsigned int*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:600:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] while (bytes[num_of_bytes] >= num) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp: In function 'void sendints(int*, int, int, unsigned int*, unsigned int*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:654:37: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if (num_of_bits >= num_of_bytes * 8) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:655:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (i = 0; i < num_of_bytes; i++) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:660:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (i = 0; i < num_of_bytes-1; i++) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp: In function 'int receivebits(int*, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:695:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if (lastbits < num_of_bits) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp: In function 'int xdr3dfcoord(XDR*, float*, int*, float*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:397:54: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] #define LASTIDX (sizeof(magicints) / sizeof(int) - 1 ) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:935:23: note: in expansion of macro 'LASTIDX' while (smallidx < LASTIDX && magicints[smallidx] < mindiff) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:46:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] #define MYMIN(a,b) ((a) < (b) ? (a) : (b)) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:939:14: note: in expansion of macro 'MYMIN' maxidx = MYMIN(LASTIDX, smallidx + 8) ; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:46:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] #define MYMIN(a,b) ((a) < (b) ? (a) : (b)) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:1115:14: note: in expansion of macro 'MYMIN' maxidx = MYMIN(LASTIDX, smallidx + 8) ; ^ [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_deposit.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_deposit.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_deposit.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:1141:54: warning: 'bitsizeint[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] thiscoord[2] = receivebits(buf, bitsizeint[2]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:1140:54: warning: 'bitsizeint[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] thiscoord[1] = receivebits(buf, bitsizeint[1]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:1139:54: warning: 'bitsizeint[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] thiscoord[0] = receivebits(buf, bitsizeint[0]); ^ [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_efield.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_efield.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_efield.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_deposit.cpp: In member function 'virtual void LAMMPS_NS::FixDeposit::pre_exchange()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_deposit.cpp:529:56: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] else atom->avec->create_atom(ntype+onemols[imol]->type[m],coords[m]); ^ [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_evaporate.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_evaporate.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_evaporate.cpp [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_gld.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_gld.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_gld.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_evaporate.cpp: In member function 'virtual void LAMMPS_NS::FixEvaporate::pre_exchange()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_evaporate.cpp:324:31: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] } else if (me == proc && i == iatom) { ^ [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_oneway.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_oneway.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_oneway.cpp [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_orient_bcc.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_orient_bcc.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_orient_bcc.cpp [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_orient_fcc.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_orient_fcc.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_orient_fcc.cpp [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_thermal_conductivity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_thermal_conductivity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_thermal_conductivity.cpp [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_ttm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_ttm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_ttm.cpp [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_viscosity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_viscosity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_viscosity.cpp [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp: In member function 'virtual double LAMMPS_NS::PairNMCut::init_one(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:277:12: warning: unused variable 'rr1' [-Wunused-variable] double rr1 = mm[i][j]*(nn[i][j]-1)*pow(r0[i][j],nn[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:278:12: warning: unused variable 'rr2' [-Wunused-variable] double rr2 = nn[i][j]*(mm[i][j]-1)*pow(r0[i][j],mm[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:279:12: warning: unused variable 'p1' [-Wunused-variable] double p1 = 1-nn[i][j]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:280:12: warning: unused variable 'p2' [-Wunused-variable] double p2 = 1-mm[i][j]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:282:12: warning: unused variable 'rrr1' [-Wunused-variable] double rrr1 = pow(r0[i][j],nn[i][j])*(1-nn[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:283:12: warning: unused variable 'rrr2' [-Wunused-variable] double rrr2 = pow(r0[i][j],mm[i][j])*(1-mm[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:331:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:335:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&e0[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:336:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:337:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&nn[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:338:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mm[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:339:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:369:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:370:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:371:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:372:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulCut::init_one(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:327:12: warning: unused variable 'rr1' [-Wunused-variable] double rr1 = mm[i][j]*(nn[i][j]-1)*pow(r0[i][j],nn[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:328:12: warning: unused variable 'rr2' [-Wunused-variable] double rr2 = nn[i][j]*(mm[i][j]-1)*pow(r0[i][j],mm[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:329:12: warning: unused variable 'p1' [-Wunused-variable] double p1 = 1-nn[i][j]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:330:12: warning: unused variable 'p2' [-Wunused-variable] double p2 = 1-mm[i][j]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:332:12: warning: unused variable 'rrr1' [-Wunused-variable] double rrr1 = pow(r0[i][j],nn[i][j])*(1-nn[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:333:12: warning: unused variable 'rrr2' [-Wunused-variable] double rrr2 = pow(r0[i][j],mm[i][j])*(1-mm[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:382:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:386:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&e0[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:387:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:388:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&nn[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:389:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mm[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:390:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:391:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:423:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:424:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:425:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:426:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:427:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulCut::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:487:65: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:151:58: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized] r0n[itype][jtype]*rninv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:153:58: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized] r0m[itype][jtype]*rminv) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulLong::init_one(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:374:12: warning: unused variable 'rr1' [-Wunused-variable] double rr1 = mm[i][j]*(nn[i][j]-1)*pow(r0[i][j],nn[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:375:12: warning: unused variable 'rr2' [-Wunused-variable] double rr2 = nn[i][j]*(mm[i][j]-1)*pow(r0[i][j],mm[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:376:12: warning: unused variable 'p1' [-Wunused-variable] double p1 = 1-nn[i][j]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:377:12: warning: unused variable 'p2' [-Wunused-variable] double p2 = 1-mm[i][j]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:379:12: warning: unused variable 'rrr1' [-Wunused-variable] double rrr1 = pow(r0[i][j],nn[i][j])*(1-nn[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:380:12: warning: unused variable 'rrr2' [-Wunused-variable] double rrr2 = pow(r0[i][j],mm[i][j])*(1-mm[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:429:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:433:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&e0[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:434:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:435:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&nn[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:436:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mm[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:437:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:470:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:471:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:472:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:473:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:474:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:475:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:476:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/xdr_compat.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/xdr_compat.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/xdr_compat.cpp [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_charmm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_charmm.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulLong::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:562:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:562:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:565:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:560:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:572:65: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:187:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:192:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:197:50: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized] (mm[itype][jtype]*r0n[itype][jtype]*rninv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:198:50: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized] nn[itype][jtype]*r0m[itype][jtype]*rminv) - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:189:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:189:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_charmm.cpp: In member function 'virtual void LAMMPS_NS::AngleCharmm::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_charmm.cpp:249:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_charmm.cpp:250:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&theta0[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_charmm.cpp:251:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k_ub[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_charmm.cpp:252:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r_ub[1],sizeof(double),atom->nangletypes,fp); ^ [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine.cpp: In member function 'virtual void LAMMPS_NS::AngleCosine::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine.cpp:197:70: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (comm->me == 0) fread(&k[1],sizeof(double),atom->nangletypes,fp); ^ [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_delta.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_delta.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_delta.cpp [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_periodic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_periodic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_periodic.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_periodic.cpp: In member function 'virtual void LAMMPS_NS::AngleCosinePeriodic::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_periodic.cpp:250:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_periodic.cpp:251:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&b[1],sizeof(int),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_periodic.cpp:252:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&multiplicity[1],sizeof(int),atom->nangletypes,fp); ^ [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_squared.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_squared.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_squared.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_squared.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineSquared::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_squared.cpp:219:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_squared.cpp:220:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&theta0[1],sizeof(double),atom->nangletypes,fp); ^ [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_harmonic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_harmonic.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_harmonic.cpp: In member function 'virtual void LAMMPS_NS::AngleHarmonic::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_harmonic.cpp:219:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_harmonic.cpp:220:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&theta0[1],sizeof(double),atom->nangletypes,fp); ^ [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp: In member function 'virtual void LAMMPS_NS::AngleTable::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp:292:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabstyle,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp:293:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tablength,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp: In member function 'void LAMMPS_NS::AngleTable::read_table(LAMMPS_NS::AngleTable::Table*, char*, char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp:385:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); // no match, skip section ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp:387:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp:388:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp:394:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp:403:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp:405:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_angle.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_angle.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_angle.cpp [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_bond.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_bond.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_bond.cpp [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_full.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_full.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_full.cpp [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_molecular.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_molecular.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_molecular.cpp [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_template.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_template.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_template.cpp [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene.cpp: In member function 'virtual void LAMMPS_NS::BondFENE::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene.cpp:220:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene.cpp:221:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene.cpp:222:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene.cpp:223:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[1],sizeof(double),atom->nbondtypes,fp); ^ [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene_expand.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene_expand.cpp [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_gromos.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_gromos.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_gromos.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene_expand.cpp: In member function 'virtual void LAMMPS_NS::BondFENEExpand::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene_expand.cpp:229:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene_expand.cpp:230:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene_expand.cpp:231:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene_expand.cpp:232:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene_expand.cpp:233:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&shift[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_gromos.cpp: In member function 'virtual void LAMMPS_NS::BondGromos::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_gromos.cpp:172:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_gromos.cpp:173:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[1],sizeof(double),atom->nbondtypes,fp); ^ [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_harmonic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_harmonic.cpp [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_morse.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_morse.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_harmonic.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonic::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_harmonic.cpp:172:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_harmonic.cpp:173:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_morse.cpp: In member function 'virtual void LAMMPS_NS::BondMorse::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_morse.cpp:176:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&d0[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_morse.cpp:177:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_morse.cpp:178:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[1],sizeof(double),atom->nbondtypes,fp); ^ [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_nonlinear.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_nonlinear.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_nonlinear.cpp [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_quartic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_quartic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_quartic.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_nonlinear.cpp: In member function 'virtual void LAMMPS_NS::BondNonlinear::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_nonlinear.cpp:171:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_nonlinear.cpp:172:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_nonlinear.cpp:173:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&lamda[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_quartic.cpp: In member function 'virtual void LAMMPS_NS::BondQuartic::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_quartic.cpp:281:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_quartic.cpp:282:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&b1[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_quartic.cpp:283:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&b2[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_quartic.cpp:284:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&rc[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_quartic.cpp:285:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&u0[1],sizeof(double),atom->nbondtypes,fp); ^ [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmm.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp: In member function 'virtual void LAMMPS_NS::BondTable::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp:236:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabstyle,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp:237:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tablength,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp: In member function 'void LAMMPS_NS::BondTable::read_table(LAMMPS_NS::BondTable::Table*, char*, char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp:314:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); // no match, skip section ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp:316:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp:317:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp:323:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp:335:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmm.cpp: In member function 'virtual void LAMMPS_NS::DihedralCharmm::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmm.cpp:429:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmm.cpp:430:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmm.cpp:431:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&shift[1],sizeof(int),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmm.cpp:432:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&weight[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmm.cpp:433:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&weightflag,sizeof(int),1,fp); ^ [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmmfsw.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmmfsw.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmmfsw.cpp [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_harmonic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_harmonic.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmmfsw.cpp: In member function 'virtual void LAMMPS_NS::DihedralCharmmfsw::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmmfsw.cpp:472:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmmfsw.cpp:473:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmmfsw.cpp:474:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&shift[1],sizeof(int),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmmfsw.cpp:475:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&weight[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_harmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralHarmonic::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_harmonic.cpp:333:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_harmonic.cpp:334:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sign[1],sizeof(int),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_harmonic.cpp:335:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmmfsw.cpp:476:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&weightflag,sizeof(int),1,fp); ^ [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_helix.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_helix.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_helix.cpp [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_multi_harmonic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_multi_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_multi_harmonic.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_helix.cpp: In member function 'virtual void LAMMPS_NS::DihedralHelix::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_helix.cpp:325:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aphi[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_helix.cpp:326:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bphi[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_helix.cpp:327:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cphi[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_multi_harmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralMultiHarmonic::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_multi_harmonic.cpp:320:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_multi_harmonic.cpp:321:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_multi_harmonic.cpp:322:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a3[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_multi_harmonic.cpp:323:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a4[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_multi_harmonic.cpp:324:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a5[1],sizeof(double),atom->ndihedraltypes,fp); ^ [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_opls.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_opls.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_opls.cpp [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/fix_cmap.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/fix_cmap.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/fix_cmap.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_opls.cpp: In member function 'virtual void LAMMPS_NS::DihedralOPLS::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_opls.cpp:335:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_opls.cpp:336:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_opls.cpp:337:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k3[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_opls.cpp:338:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k4[1],sizeof(double),atom->ndihedraltypes,fp); ^ [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp: In member function 'virtual void LAMMPS_NS::ImproperCvff::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp:339:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp:340:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sign[1],sizeof(int),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp:341:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&multiplicity[1],sizeof(int),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/fix_cmap.cpp: In member function 'double LAMMPS_NS::FixCMAP::dihedral_angle_atan2(double, double, double, double, double, double, double, double, double, double)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/fix_cmap.cpp:958:10: warning: 'angle' may be used uninitialized in this function [-Wmaybe-uninitialized] return angle; ^ [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_harmonic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_harmonic.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp: In member function 'virtual void LAMMPS_NS::ImproperCvff::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp:209:15: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized] pd = -pd; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp:208:18: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized] p = 2.0 - p; ^ [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_umbrella.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_umbrella.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_umbrella.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_harmonic.cpp: In member function 'virtual void LAMMPS_NS::ImproperHarmonic::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_harmonic.cpp:280:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_harmonic.cpp:281:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&chi[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_umbrella.cpp: In member function 'virtual void LAMMPS_NS::ImproperUmbrella::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_umbrella.cpp:321:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&kw[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_umbrella.cpp:322:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&w0[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_umbrella.cpp:323:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&C[1],sizeof(double),atom->nimpropertypes,fp); ^ [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingLJ::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp:153:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] else k = atom->map(klist[kk]+tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual double LAMMPS_NS::PairHbondDreidingLJ::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp:512:41: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] else k = atom->map(klist[kk]+tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingLJ::coeff(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp:375:9: warning: 'donor_flag' may be used uninitialized in this function [-Wmaybe-uninitialized] if (donor_flag == 0) type2param[i][j][k] = nparams; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingMorse::coeff(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp:302:9: warning: 'donor_flag' may be used uninitialized in this function [-Wmaybe-uninitialized] if (donor_flag == 0) type2param[i][j][k] = nparams; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingMorse::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp:123:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] else k = atom->map(klist[kk]+tagprev); ^ [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual double LAMMPS_NS::PairHbondDreidingMorse::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp:415:41: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] else k = atom->map(klist[kk]+tagprev); ^ [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:379:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:383:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:384:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:385:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&eps14[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:386:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma14[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:440:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_inner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:441:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:442:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul_inner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:443:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:444:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:445:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:201:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulCharmm::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:502:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:168:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:134:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:134:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:437:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:441:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:442:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:443:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&eps14[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:444:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma14[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:474:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_inner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:475:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:476:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:477:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:478:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:621:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:625:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:626:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:627:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:663:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeO,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:664:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeH,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:665:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeB,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:666:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeA,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:667:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&qdist,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:669:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:670:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:671:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:672:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:673:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:534:34: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj6 = -lj4[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:529:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:196:42: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl6 = -lj4[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:194:47: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl12 = r6inv*lj3[itype][jtype]*r6inv - ^ [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:378:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:377:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:305:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:301:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fH[0]; ^ [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/atom_vec_peri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/atom_vec_peri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/atom_vec_peri.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:480:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:507:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeO,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:508:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeH,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:509:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeB,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:510:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeA,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:511:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&qdist,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:513:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:338:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:337:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:265:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:261:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fH[0]; ^ [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_damage_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_damage_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_damage_atom.cpp [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_dilatation_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_dilatation_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_dilatation_atom.cpp [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_plasticity_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_plasticity_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_plasticity_atom.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_dilatation_atom.cpp: In member function 'virtual void LAMMPS_NS::ComputeDilatationAtom::compute_peratom()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_dilatation_atom.cpp:116:52: warning: 'theta' may be used uninitialized in this function [-Wmaybe-uninitialized] if (mask[i] & groupbit) dilatation[i] = theta[i]; ^ [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/fix_peri_neigh.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/fix_peri_neigh.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/fix_peri_neigh.cpp [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp: In member function 'virtual void LAMMPS_NS::PairPeriEPS::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp:570:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp:574:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bulkmodulus[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp:575:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&shearmodulus[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp:576:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&s00[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp:577:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp:578:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp:579:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&m_yieldstress[i][j],sizeof(double),1,fp); ^ [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp: In member function 'virtual void LAMMPS_NS::PairPeriLPS::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp:495:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp:499:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bulkmodulus[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp:500:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&shearmodulus[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp:501:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&s00[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp:502:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp:503:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_pmb.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_pmb.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_pmb.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_pmb.cpp: In member function 'virtual void LAMMPS_NS::PairPeriPMB::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_pmb.cpp:424:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_pmb.cpp:428:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&kspring[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_pmb.cpp:429:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&s00[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_pmb.cpp:430:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_pmb.cpp:431:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp: In member function 'virtual void LAMMPS_NS::PairPeriVES::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp:552:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp:556:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bulkmodulus[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp:557:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&shearmodulus[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp:558:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&s00[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp:559:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp:560:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp:561:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&m_lambdai[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp:562:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&m_taubi[i][j],sizeof(double),1,fp); ^ [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/compute_event_displace.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/compute_event_displace.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/compute_event_displace.cpp [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_event.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_event.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_event.cpp [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_event_prd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_event_prd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_event_prd.cpp [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_event_tad.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_event_tad.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_event_tad.cpp [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_neb.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_neb.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_neb.cpp [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/neb.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/neb.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/neb.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_neb.cpp: In member function 'virtual void LAMMPS_NS::FixNEB::min_post_force(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_neb.cpp:616:45: warning: 'lenuntilIm' may be used uninitialized in this function [-Wmaybe-uninitialized] prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_neb.cpp:616:45: warning: 'idealPos' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_neb.cpp:616:58: warning: 'meanDist' may be used uninitialized in this function [-Wmaybe-uninitialized] prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist); ^ [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/prd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/prd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/prd.cpp [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/tad.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/tad.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/tad.cpp [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/temper.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/temper.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/temper.cpp [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/verlet_split.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/verlet_split.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/verlet_split.cpp [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/compute_erotate_rigid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/compute_erotate_rigid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/compute_erotate_rigid.cpp [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/compute_ke_rigid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/compute_ke_rigid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/compute_ke_rigid.cpp [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/compute_rigid_local.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/compute_rigid_local.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/compute_rigid_local.cpp [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_ehex.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_ehex.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_ehex.cpp [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rattle.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rattle.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rattle.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_ehex.cpp: In member function 'virtual void LAMMPS_NS::FixEHEX::init()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_ehex.cpp:203:48: warning: 'id_shake' may be used uninitialized in this function [-Wmaybe-uninitialized] fshake = ((FixShake*) modify->fix[id_shake]); ^ [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::compute_forces_and_torques()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1033:10: warning: unused variable 'dtfm' [-Wunused-variable] double dtfm; ^ [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh.cpp: In member function 'virtual void LAMMPS_NS::FixRigidNH::final_integrate()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh.cpp:594:7: warning: unused variable 'i' [-Wunused-variable] int i,ibody; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh.cpp:596:15: warning: unused variable 'xy' [-Wunused-variable] double dtfm,xy,xz,yz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh.cpp:596:18: warning: unused variable 'xz' [-Wunused-variable] double dtfm,xy,xz,yz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh.cpp:596:21: warning: unused variable 'yz' [-Wunused-variable] double dtfm,xy,xz,yz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp: In constructor 'LAMMPS_NS::FixRigid::FixRigid(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:580:51: warning: 'seed' may be used uninitialized in this function [-Wmaybe-uninitialized] if (langflag) random = new RanMars(lmp,seed + me); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:397:30: warning: 'zflag' may be used uninitialized in this function [-Wmaybe-uninitialized] tflag[m-1][2] = zflag; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:396:30: warning: 'yflag' may be used uninitialized in this function [-Wmaybe-uninitialized] tflag[m-1][1] = yflag; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:395:30: warning: 'xflag' may be used uninitialized in this function [-Wmaybe-uninitialized] tflag[m-1][0] = xflag; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:359:34: warning: 'zflag' may be used uninitialized in this function [-Wmaybe-uninitialized] if (domain->dimension == 2 && zflag == 1.0) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:365:30: warning: 'yflag' may be used uninitialized in this function [-Wmaybe-uninitialized] fflag[m-1][1] = yflag; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:364:30: warning: 'xflag' may be used uninitialized in this function [-Wmaybe-uninitialized] fflag[m-1][0] = xflag; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:225:32: warning: 'molecule' may be used uninitialized in this function [-Wmaybe-uninitialized] if (custom_flag) delete [] molecule; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::set_xv()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1484:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1479:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1463:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1407:50: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized] x[i][1] += xcm[ibody][1] - ybox*yprd - zbox*yz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1406:60: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized] x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1406:50: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized] x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::set_v()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1629:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1616:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1578:40: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized] x1 = x[i][1] + ybox*yprd + zbox*yz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1577:50: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized] x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1577:40: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized] x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::setup_bodies_dynamic()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:2225:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] radone = lbonus[line[i]].length; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::readfile(int, double*, double**, double**, double**, LAMMPS_NS::imageint*, int*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:2298:67: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized] eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer); ^ [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh_small.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh_small.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh_small.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::setup_bodies_static()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:2124:31: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized] if (infile && inbody[ibody]) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:2105:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:2022:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] orient[i][0] = lbonus[line[i]].theta - theta_body; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:2087:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh_small.cpp: In member function 'virtual void LAMMPS_NS::FixRigidNHSmall::final_integrate()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh_small.cpp:621:7: warning: unused variable 'i' [-Wunused-variable] int i,ibody; ^ [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nph.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nph.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nph.cpp [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nph_small.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nph_small.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nph_small.cpp [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_npt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_npt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_npt.cpp [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_npt_small.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_npt_small.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_npt_small.cpp [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nve.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nve.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nve.cpp [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nve_small.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nve_small.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nve_small.cpp [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nvt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nvt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nvt.cpp [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nvt_small.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nvt_small.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nvt_small.cpp [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_shake.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_shake.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_shake.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp: In member function 'virtual void LAMMPS_NS::FixRigidSmall::write_restart_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:2702:26: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized] if (me == 0) fclose(fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::set_xv()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:1364:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:1359:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:1344:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::set_v()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:1502:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:1489:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::setup_bodies_dynamic()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:2422:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] radone = lbonus[line[i]].length; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp: In constructor 'LAMMPS_NS::FixRigidSmall::FixRigidSmall(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:496:57: warning: 'seed' may be used uninitialized in this function [-Wmaybe-uninitialized] if (langflag) random = new RanMars(lmp,seed + comm->me); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::readfile(int, double**, int*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:2508:67: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized] eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::setup_bodies_static()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:2306:31: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized] if (infile && inbody[ibody]) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:2284:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:2199:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] orient[i][0] = lbonus[line[i]].theta - theta_body; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:2266:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_append_atoms.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_append_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_append_atoms.cpp [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_msst.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_msst.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_msst.cpp [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_nphug.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_nphug.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_nphug.cpp [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_wall_piston.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_wall_piston.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_wall_piston.cpp [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/compute_sna_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/compute_sna_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/compute_sna_atom.cpp [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/compute_snad_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/compute_snad_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/compute_snad_atom.cpp [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/compute_snav_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/compute_snav_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/compute_snav_atom.cpp [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/pair_snap.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/pair_snap.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/pair_snap.cpp [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/sna.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/sna.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/sna.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/pair_snap.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/pair_snap.cpp:478:9: warning: 'ielem' may be used uninitialized in this function [-Wmaybe-uninitialized] int ielem; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/pair_snap.cpp:725:53: warning: 'starttime' may be used uninitialized in this function [-Wmaybe-uninitialized] if (time_guided) schedule_time_guided = endtime - starttime; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/pair_snap.cpp:523:12: note: 'starttime' was declared here double starttime, endtime; ^ [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp [ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_wall_srd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_wall_srd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_wall_srd.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_wall_srd.cpp: In constructor 'LAMMPS_NS::FixWallSRD::FixWallSRD(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_wall_srd.cpp:67:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized] wallwhich[nwall] = newwall; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::big_static()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:2966:25: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] c1 = tbonus[tri[i]].c1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:2954:30: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] length = lbonus[line[i]].length; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:2938:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::big_dynamic()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:3049:30: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertia = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:3036:40: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] biglist[k].theta = lbonus[line[i]].theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:3024:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ [ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_invoke.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_invoke.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_invoke.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::reset_velocities()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1017:33: warning: 'dof_tstat' may be used uninitialized in this function [-Wmaybe-uninitialized] tbin = vbin[i].value[0]/(n-dof_tstat) * tfactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::parameterize()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:2683:37: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] double *c1 = tbonus[tri[i]].c1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:2703:41: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] double length = lbonus[line[i]].length; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:2700:46: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] double *shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::end_of_step()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_invoke.cpp:91:14: warning: unused variable 'result' [-Wunused-variable] PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::post_force(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_invoke.cpp:108:14: warning: unused variable 'result' [-Wunused-variable] PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::collisions_multi()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1548:33: warning: 'xbcollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] xbcoll[2] = xbcollfirst[2]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1547:33: warning: 'xbcollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] xbcoll[1] = xbcollfirst[1]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1546:33: warning: 'xbcollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] xbcoll[0] = xbcollfirst[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1545:33: warning: 'xscollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] xscoll[2] = xscollfirst[2]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1544:33: warning: 'xscollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] xscoll[1] = xscollfirst[1]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1543:33: warning: 'xscollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] xscoll[0] = xscollfirst[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1551:29: warning: 'normfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] norm[2] = normfirst[2]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1550:29: warning: 'normfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] norm[1] = normfirst[1]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1549:29: warning: 'normfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] norm[0] = normfirst[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1576:32: warning: 'typefirst' may be used uninitialized in this function [-Wmaybe-uninitialized] if (collidestyle == SLIP && type == SPHERE) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1581:33: warning: 'jfirst' may be used uninitialized in this function [-Wmaybe-uninitialized] force_wall(v[i],vsnew,j); ^ [ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp [ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/pair_python.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/pair_python.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/pair_python.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::init()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp:146:14: warning: unused variable 'result' [-Wunused-variable] PyObject * result = PyEval_CallObject(py_init, NULL); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp:164:14: warning: unused variable 'result' [-Wunused-variable] PyObject * result = PyEval_CallObject(py_initial_integrate, arglist); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp:182:14: warning: unused variable 'result' [-Wunused-variable] PyObject * result = PyEval_CallObject(py_final_integrate, NULL); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate_respa(int, int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp:200:14: warning: unused variable 'result' [-Wunused-variable] PyObject * result = PyEval_CallObject(py_initial_integrate_respa, arglist); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate_respa(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp:219:14: warning: unused variable 'result' [-Wunused-variable] PyObject * result = PyEval_CallObject(py_final_integrate_respa, arglist); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::reset_dt()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp:237:14: warning: unused variable 'result' [-Wunused-variable] PyObject * result = PyEval_CallObject(py_reset_dt, NULL); ^ [ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/python_impl.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/python_impl.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/python_impl.cpp [ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/dump_atom_mpiio.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/dump_atom_mpiio.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/dump_atom_mpiio.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/python_impl.cpp: In member function 'int LAMMPS_NS::PythonImpl::create_entry(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/python_impl.cpp:410:47: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] else if (format && strlen(format) != ninput+noutput) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/python_impl.cpp: In member function 'virtual void LAMMPS_NS::PythonImpl::invoke_function(int, char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/python_impl.cpp:320:36: warning: 'pValue' may be used uninitialized in this function [-Wmaybe-uninitialized] PyTuple_SetItem(pArgs,i,pValue); ^ [ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/dump_cfg_mpiio.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/dump_cfg_mpiio.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/dump_cfg_mpiio.cpp [ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/dump_custom_mpiio.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/dump_custom_mpiio.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/dump_custom_mpiio.cpp [ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/dump_xyz_mpiio.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/dump_xyz_mpiio.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/dump_xyz_mpiio.cpp [ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/restart_mpiio.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/restart_mpiio.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/restart_mpiio.cpp [ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI/compute_voronoi_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI/compute_voronoi_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI/compute_voronoi_atom.cpp [ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC/fix_atc.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC/fix_atc.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC/fix_atc.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI/compute_voronoi_atom.cpp: In member function 'void LAMMPS_NS::ComputeVoronoi::processCell(voro::voronoicell_neighbor&, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI/compute_voronoi_atom.cpp:515:30: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (j=0; j = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:497:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:492:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:476:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:497:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:492:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:476:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:497:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:492:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:476:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:497:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:492:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:476:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:674:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:661:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:674:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:661:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:674:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:661:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ [ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nve_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nve_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nve_omp.cpp [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nvt_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nvt_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nvt_omp.cpp [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_nphug_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_nphug_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_nphug_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:438:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:433:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:418:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:438:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:433:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:418:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_class2_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_class2_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:438:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:433:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:418:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:438:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:433:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:418:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:612:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:599:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:612:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:599:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:612:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:599:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp:239:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized] pd = -pd; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp:238:7: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized] p = 2.0 - p; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp:239:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized] pd = -pd; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp:238:7: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized] p = 2.0 - p; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_BOND = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp:239:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized] pd = -pd; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_BOND = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp:239:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_BOND = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp:239:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_BOND = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp:239:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_harmonic_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_harmonic_omp.cpp [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_umbrella_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_umbrella_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_umbrella_omp.cpp [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/respa_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/respa_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/respa_omp.cpp [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/ewald_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/ewald_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/ewald_omp.cpp [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/msm_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/msm_omp.cpp [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/msm_cg_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/msm_cg_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/msm_cg_omp.cpp [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_omp.cpp [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_cg_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_cg_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_cg_omp.cpp [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_disp_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_disp_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_disp_omp.cpp [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_disp_tip4p_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_disp_tip4p_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_disp_tip4p_omp.cpp [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_tip4p_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_tip4p_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_tip4p_omp.cpp [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp:113:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp:49:43: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp:114:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp:50:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp:113:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp:49:38: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_atomonly_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_atomonly_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_atomonly_omp.cpp [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp:119:67: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp:51:43: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp:120:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp:52:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp:119:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp:51:38: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp:121:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp:50:46: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp:122:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp:51:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp:121:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp:50:41: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp:113:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp:51:36: note: 'iatom' was declared here int i,j,n,itype,jtype,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp:114:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp:52:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp:113:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp:51:31: note: 'imol' was declared here int i,j,n,itype,jtype,which,imol,iatom; ^ [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:113:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:51:36: note: 'iatom' was declared here int i,j,n,itype,jtype,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:114:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:52:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:113:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:51:31: note: 'imol' was declared here int i,j,n,itype,jtype,which,imol,iatom; ^ [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:117:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:50:43: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:118:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:51:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:117:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:50:38: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:126:67: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:54:43: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:127:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:55:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:126:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:54:38: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp:150:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp:50:43: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp:120:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp:51:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp:150:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp:50:38: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:123:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:49:43: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:124:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:50:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:123:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:49:38: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:124:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:51:46: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:125:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:52:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:124:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:51:41: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp:157:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp:50:46: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp:121:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp:51:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp:157:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp:50:41: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom; ^ [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:133:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:51:46: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:134:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:52:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:133:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:51:41: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:113:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:52:36: note: 'iatom' was declared here int i,j,n,itype,jtype,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:114:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:53:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:113:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:52:31: note: 'imol' was declared here int i,j,n,itype,jtype,which,imol,iatom; ^ [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:121:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:55:36: note: 'iatom' was declared here int i,j,n,itype,jtype,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:122:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:56:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:121:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:55:31: note: 'imol' was declared here int i,j,n,itype,jtype,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp:131:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp:51:46: note: 'iatom' was declared here int i,j,n,itype,jtype,itag,jtag,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp:132:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp:52:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp:131:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp:51:41: note: 'imol' was declared here int i,j,n,itype,jtype,itag,jtag,which,imol,iatom; ^ [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:148:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:54: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:149:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:56:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:148:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:49: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:166:55: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] if (which == 0) neighptr_middle[n_middle++] = j; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:40: note: 'n_middle' was declared here int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:191:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:58:34: note: 'neighptr_middle' was declared here int *neighptr,*neighptr_inner,*neighptr_middle; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:17: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] index += n; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:95:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:192:36: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] numneigh_middle[i] = n_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:82:22: note: 'numneigh_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:191:45: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:82:40: note: 'firstneigh_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:190:26: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] ilist_middle[i] = i; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:82:8: note: 'ilist_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:194:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:54: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:151:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:55:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:194:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:49: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:167:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] if (which == 0) neighptr_middle[n_middle++] = j; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:40: note: 'n_middle' was declared here int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:237:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:57:34: note: 'neighptr_middle' was declared here int *neighptr,*neighptr_inner,*neighptr_middle; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:17: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] index += n; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:94:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:238:36: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] numneigh_middle[i] = n_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:81:22: note: 'numneigh_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:237:45: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:81:40: note: 'firstneigh_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:236:26: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] ilist_middle[i] = i; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:81:8: note: 'ilist_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:155:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:54: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:156:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:55:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:155:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:49: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:173:55: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] if (which == 0) neighptr_middle[n_middle++] = j; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:40: note: 'n_middle' was declared here int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:198:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:57:34: note: 'neighptr_middle' was declared here int *neighptr,*neighptr_inner,*neighptr_middle; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:17: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] errorflag = 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:94:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:145:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:47: note: 'iatom' was declared here int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:146:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:57:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:145:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:42: note: 'imol' was declared here int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:161:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] if (which == 0) neighptr_middle[n_middle++] = j; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:33: note: 'n_middle' was declared here int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:185:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:59:34: note: 'neighptr_middle' was declared here int *neighptr,*neighptr_inner,*neighptr_middle; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:17: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] index += n; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:98:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:186:36: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] numneigh_middle[i] = n_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:85:22: note: 'numneigh_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:185:45: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:85:40: note: 'firstneigh_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:184:26: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] ilist_middle[i] = i; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:85:8: note: 'ilist_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:163:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:57: note: 'iatom' was declared here int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:164:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:58:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:163:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:52: note: 'imol' was declared here int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:180:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] if (which == 0) neighptr_middle[n_middle++] = j; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:43: note: 'n_middle' was declared here int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:204:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:60:34: note: 'neighptr_middle' was declared here int *neighptr,*neighptr_inner,*neighptr_middle; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:17: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] index += n; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:99:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:205:36: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] numneigh_middle[i] = n_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:86:22: note: 'numneigh_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:204:45: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:86:40: note: 'firstneigh_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:203:26: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] ilist_middle[i] = i; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:86:8: note: 'ilist_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_bin_newton_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_bin_newton_omp.cpp [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_nsq_newtoff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_nsq_newtoff_omp.cpp [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_nsq_newton_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_nsq_newton_omp.cpp [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_halffull_newtoff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_halffull_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_halffull_newtoff_omp.cpp [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_halffull_newton_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_halffull_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_halffull_newton_omp.cpp [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_beck_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_beck_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_beck_omp.cpp [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_omp.cpp [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp:182:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp:179:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp:182:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp:182:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp:179:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp:182:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv + ^ [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_cut_omp.cpp [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_cut_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_cut_omp.cpp:157:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_cut_omp.cpp:157:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_cut_omp.cpp:157:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_cut_omp.cpp:157:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_debye_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_debye_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_debye_omp.cpp [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_dsf_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_dsf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_dsf_omp.cpp [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_wolf_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_wolf_omp.cpp [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_dpd_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_dpd_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_dpd_omp.cpp [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_dpd_tstat_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_dpd_tstat_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_dpd_tstat_omp.cpp [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gauss_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gauss_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gauss_omp.cpp [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj96_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj96_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj96_cut_omp.cpp [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cubic_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cubic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cubic_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cubic_omp.cpp: In member function 'void LAMMPS_NS::PairLJCubicOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cubic_omp.cpp:149:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = epsilon[itype][jtype]* ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cubic_omp.cpp:147:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cubic_omp.cpp: In member function 'void LAMMPS_NS::PairLJCubicOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cubic_omp.cpp:149:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = epsilon[itype][jtype]* ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cubic_omp.cpp:147:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]); ^ [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_omp.cpp [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:159:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:156:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = factor_coul * qqrd2e * qtmp*q[j]*rinv; ^ [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:159:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:156:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = factor_coul * qqrd2e * qtmp*q[j]*rinv; ^ [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:159:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:159:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:162:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:159:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:159:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:162:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:182:13: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:183:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:176:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:182:13: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:182:13: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:183:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:176:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:182:13: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_expand_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_expand_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_expand_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:182:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:182:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_omp.cpp [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_omp.cpp:148:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_omp.cpp:148:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsCoulGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp:182:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsCoulGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp:182:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_linear_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_linear_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_linear_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp: In member function 'void LAMMPS_NS::PairLJSmoothOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp:152:13: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp:152:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp:149:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp: In member function 'void LAMMPS_NS::PairLJSmoothOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp:152:13: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp:152:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp:149:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - ^ [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_morse_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_morse_omp.cpp [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_soft_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_soft_omp.cpp [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_ufm_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_ufm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_ufm_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp: In member function 'void LAMMPS_NS::PairTableOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp:189:13: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a * tb->e[itable] + b * tb->e[itable+1] + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp:189:13: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp:187:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = tb->e[itable] + fraction*tb->de[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp: In member function 'void LAMMPS_NS::PairTableOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp:189:13: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a * tb->e[itable] + b * tb->e[itable+1] + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp:189:13: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp:187:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = tb->e[itable] + fraction*tb->de[itable]; ^ [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_yukawa_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_yukawa_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_yukawa_omp.cpp [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_zbl_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_zbl_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_zbl_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_zbl_omp.cpp: In member function 'void LAMMPS_NS::PairZBLOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_zbl_omp.cpp:148:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] eswitch = t*t*t * ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_zbl_omp.cpp: In member function 'void LAMMPS_NS::PairZBLOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_zbl_omp.cpp:148:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gayberne_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gayberne_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gayberne_omp.cpp [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_resquared_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_resquared_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_resquared_omp.cpp [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_omp.cpp [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:161:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:161:13: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:161:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:161:13: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_brownian_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_brownian_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_brownian_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:172:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:173:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:177:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:177:13: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:172:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:173:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:177:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:177:13: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_brownian_poly_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_brownian_poly_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_brownian_poly_omp.cpp [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lubricate_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lubricate_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lubricate_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp:213:19: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG) ev_tally_thr(this, i,j,nlocal,NEWTON_PAIR, ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp:206:7: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] fztmp += delz*fpair; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp:213:19: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG) ev_tally_thr(this, i,j,nlocal,NEWTON_PAIR, ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp:206:7: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] fztmp += delz*fpair; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp:206:7: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp:206:7: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lubricate_poly_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lubricate_poly_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lubricate_poly_omp.cpp [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_yukawa_colloid_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_yukawa_colloid_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_yukawa_colloid_omp.cpp [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gran_hertz_history_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gran_hertz_history_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gran_hertz_history_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:256:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += qtmp*r3inv*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += -q[j]*r3inv*pidotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:15: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:15: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:256:15: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += qtmp*r3inv*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:261:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:256:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += qtmp*r3inv*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += -q[j]*r3inv*pidotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:15: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:15: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:256:15: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += qtmp*r3inv*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:261:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gran_hooke_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gran_hooke_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gran_hooke_omp.cpp [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gran_hooke_history_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gran_hooke_history_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gran_hooke_history_omp.cpp [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp:171:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp:172:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp:175:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp:171:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp:172:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp:175:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp:167:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp:166:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp:170:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp:170:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp:167:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp:166:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp:170:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp:170:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp:171:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp:172:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp:175:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp:171:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp:172:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp:175:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_long_coul_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_long_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_long_coul_long_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp:167:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp:166:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp:170:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp:170:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp:167:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp:166:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp:170:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp:170:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp:176:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp:181:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp:178:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp:178:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp:176:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp:181:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp:178:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp:178:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp:176:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp:171:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp:173:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp:173:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp:176:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp:171:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp:173:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp:173:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:193:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:197:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:190:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:190:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:193:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:197:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:190:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:190:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:188:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:192:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:185:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:185:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:188:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:192:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:185:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:185:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:456:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:464:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:462:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:467:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:464:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:470:23: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:464:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:462:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:467:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:464:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:456:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:470:23: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 0; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 1; int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:456:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 1; int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:470:23: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 1; int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:456:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 1; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:470:23: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 0; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_coul_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_coul_long_omp.cpp [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_inner(int, int, LAMMPS_NS::ThrData*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1337:28: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1333:28: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1306:28: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1302:28: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_middle(int, int, LAMMPS_NS::ThrData*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1599:28: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1595:28: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1568:28: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1564:28: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1080:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1080:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1080:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1080:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1080:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1080:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 0; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:416:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:412:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 1; int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:441:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:439:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:444:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:441:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 1; int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:441:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:439:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:444:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:441:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 1; int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 1; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 0; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:416:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:412:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_adp_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_adp_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_adp_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1080:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1080:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp: In member function 'void LAMMPS_NS::PairAIREBOOMP::TORSION_thr(int, int, int, int, double*, LAMMPS_NS::ThrData*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:1001:77: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] ev_tally4_thr(this,i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl,thr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp: In member function 'void LAMMPS_NS::PairAIREBOOMP::FLJ_thr(int, int, int, int, int, double*, LAMMPS_NS::ThrData*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:571:21: warning: 'dwij' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair = dC*dwij / rij; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:615:32: warning: 'dwmjS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair3 = dC*wikS*wkmS*dwmjS / rmjS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:610:33: warning: 'wmjS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair2 = dC*wikS*dwkmS*wmjS / rkmS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:610:27: warning: 'dwkmS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair2 = dC*wikS*dwkmS*wmjS / rkmS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:615:27: warning: 'wkmS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair3 = dC*wikS*wkmS*dwmjS / rmjS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:586:27: warning: 'dwkjS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair2 = dC*wikS*dwkjS / rkjS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:582:28: warning: 'wkjS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair1 = dC*dwikS*wkjS / rikS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:605:22: warning: 'dwikS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair1 = dC*dwikS*wkmS*wmjS / rikS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:610:22: warning: 'wikS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair2 = dC*wikS*dwkmS*wmjS / rkmS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:615:45: warning: 'rmjS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair3 = dC*wikS*wkmS*dwmjS / rmjS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:610:45: warning: 'rkmS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair2 = dC*wikS*dwkmS*wmjS / rkmS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:586:40: warning: 'rkjS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair2 = dC*wikS*dwkjS / rkjS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:605:45: warning: 'rikS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair1 = dC*dwikS*wkmS*wmjS / rikS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:641:84: warning: 'atomm' may be used uninitialized in this function [-Wmaybe-uninitialized] v_tally4_thr(atomi,atomj,atomk,atomm,fi,fj,fk,delimS,deljmS,delkmS,thr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:641:84: warning: 'atomk' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_morse_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_morse_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_comb_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_comb_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_comb_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_omp.cpp [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloyOMP::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp:139:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp:167:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp:187:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp:200:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized] if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]); ^ [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFSOMP::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp:139:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp:167:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp:189:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp:205:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized] if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eim_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eim_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eim_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nb3b_harmonic_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nb3b_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nb3b_harmonic_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_rebo_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_rebo_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_rebo_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_sw_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_sw_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_sw_omp.cpp [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_omp.cpp [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_mod_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_mod_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_mod_omp.cpp [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_mod_c_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_mod_c_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_mod_c_omp.cpp [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_zbl_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_zbl_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_zbl_omp.cpp [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_vashishta_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_vashishta_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_vashishta_omp.cpp [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_vashishta_table_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_vashishta_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_vashishta_table_omp.cpp [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nm_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nm_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nm_cut_omp.cpp [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] else k = atom->map(klist[kk]+tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] else k = atom->map(klist[kk]+tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulCharmmOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp:182:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulCharmmOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp:182:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:422:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:346:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:342:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:422:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:346:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:342:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:422:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:346:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:342:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:422:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:346:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:342:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:405:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:401:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:346:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:342:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:393:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:317:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:313:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:393:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:317:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:313:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_peri_lps_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_peri_lps_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_peri_lps_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:393:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:317:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:313:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:393:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:317:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:313:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:376:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:372:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:317:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:313:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_peri_pmb_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_peri_pmb_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_peri_pmb_omp.cpp [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_nh_asphere_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_nh_asphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_nh_asphere_omp.cpp [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_opt.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:779:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:774:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:758:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:779:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:774:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:758:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:779:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:774:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:758:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:779:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:774:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:758:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:956:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:943:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:956:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:943:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:956:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:943:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_morse_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_morse_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_morse_opt.cpp [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_ufm_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_ufm_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_ufm_opt.cpp [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:176:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:181:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:185:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp:207:17: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp:207:17: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp:209:17: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp:209:40: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:176:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:181:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:185:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp:207:17: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp:207:17: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp:209:17: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp:209:40: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:176:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:181:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:185:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:178:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:178:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:176:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:181:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:185:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:178:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:178:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_long_coul_long_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_long_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_long_coul_long_opt.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 1; int = 1; int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 1; int = 1; int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 1; int = 1; int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 1; int = 1; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 1; int = 0; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:410:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:406:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 0; int = 1; int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:435:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:433:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:438:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:435:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 0; int = 1; int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:435:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:433:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:438:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:435:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 0; int = 1; int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 0; int = 1; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 0; int = 0; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:410:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:406:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_eam_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_eam_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_eam_opt.cpp [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_eam_alloy_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_eam_alloy_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_eam_alloy_opt.cpp [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_eam_fs_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_eam_fs_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_eam_fs_opt.cpp [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/fix_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/fix_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/fix_gpu.cpp [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pppm_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pppm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pppm_gpu.cpp [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_beck_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_beck_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_beck_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_beck_gpu.cpp: In member function 'void LAMMPS_NS::PairBeckGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_beck_gpu.cpp:240:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_gpu.cpp: In member function 'void LAMMPS_NS::PairBornGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_gpu.cpp:242:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_gpu.cpp:282:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_gpu.cpp:279:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_gpu.cpp:279:72: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_gpu.cpp:283:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] d[itype][jtype]*r6inv*r2inv - offset[itype][jtype]; ^ [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_gpu.cpp [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_cut_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_cut_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_gpu.cpp:238:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_cut_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_cut_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_cut_gpu.cpp:250:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_cut_gpu.cpp:250:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_debye_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_debye_gpu.cpp [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_dsf_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_dsf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_dsf_gpu.cpp [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_dpd_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_dpd_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_dpd_gpu.cpp [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_dpd_tstat_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_dpd_tstat_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_dpd_tstat_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_dpd_gpu.cpp: In member function 'void LAMMPS_NS::PairDPDGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_dpd_gpu.cpp:406:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gauss_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gauss_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gauss_gpu.cpp [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj96_cut_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj96_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj96_cut_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gauss_gpu.cpp: In member function 'void LAMMPS_NS::PairGaussGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gauss_gpu.cpp:231:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cubic_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cubic_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cubic_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj96_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJ96CutGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj96_cut_gpu.cpp:226:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cubic_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCubicGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cubic_gpu.cpp:234:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] (PHIS + DPHIDS*t - A3*t*t*t/6.0); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cubic_gpu.cpp:231:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cubic_gpu.cpp:238:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_gpu.cpp:237:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp:249:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:253:72: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:253:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:256:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_expand_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_expand_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_expand_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:283:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:284:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:270:28: warning: 'forcecoul' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair = (forcecoul + factor_lj*forcelj) * r2inv; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:277:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:283:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_gromacs_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_gromacs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_gromacs_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_expand_gpu.cpp: In member function 'void LAMMPS_NS::PairLJExpandGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_expand_gpu.cpp:239:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_mie_cut_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_mie_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_mie_cut_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_gromacs_gpu.cpp: In member function 'void LAMMPS_NS::PairLJGromacsGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_gromacs_gpu.cpp:236:71: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_gromacs_gpu.cpp:242:74: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_morse_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_morse_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_morse_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_mie_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairMIECutGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_mie_cut_gpu.cpp:226:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_soft_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_soft_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_soft_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_morse_gpu.cpp: In member function 'void LAMMPS_NS::PairMorseGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_morse_gpu.cpp:222:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_table_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_table_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_table_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_soft_gpu.cpp: In member function 'void LAMMPS_NS::PairSoftGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_soft_gpu.cpp:233:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_ufm_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_ufm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_ufm_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_table_gpu.cpp: In member function 'void LAMMPS_NS::PairTableGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_table_gpu.cpp:334:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized] ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_table_gpu.cpp:334:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized] ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_table_gpu.cpp:331:45: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = tb->e[itable] + fraction*tb->de[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_table_gpu.cpp:339:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_ufm_gpu.cpp: In member function 'void LAMMPS_NS::PairUFMGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_ufm_gpu.cpp:236:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_zbl_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_zbl_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_zbl_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_gpu.cpp: In member function 'void LAMMPS_NS::PairYukawaGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_gpu.cpp:225:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gayberne_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gayberne_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gayberne_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_zbl_gpu.cpp: In member function 'void LAMMPS_NS::PairZBLGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_zbl_gpu.cpp:233:59: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] (sw3[itype][jtype] + sw4[itype][jtype]*t); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_zbl_gpu.cpp:238:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_resquared_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_resquared_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_resquared_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gayberne_gpu.cpp: In member function 'void LAMMPS_NS::PairGayBerneGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gayberne_gpu.cpp:335:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized] if (eflag) evdwl = factor_lj*one_eng; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gayberne_gpu.cpp:338:63: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] -r12[0],-r12[1],-r12[2]); ^ [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_resquared_gpu.cpp: In member function 'void LAMMPS_NS::PairRESquaredGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_resquared_gpu.cpp:310:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized] if (eflag) evdwl = factor_lj*one_eng; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_resquared_gpu.cpp:313:73: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] fforce[2],-r12[0],-r12[1],-r12[2]); ^ [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_gpu.cpp: In member function 'void LAMMPS_NS::PairLJClass2GPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_gpu.cpp:223:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_colloid_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_colloid_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp:273:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp:274:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp:277:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp:277:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_colloid_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_colloid_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_colloid_gpu.cpp: In member function 'void LAMMPS_NS::PairColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_colloid_gpu.cpp:302:22: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] f[i][2] += delz*fpair; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_colloid_gpu.cpp:298:36: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (eflag) evdwl *= factor_lj; ^ [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_colloid_gpu.cpp: In member function 'void LAMMPS_NS::PairYukawaColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_colloid_gpu.cpp:236:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:219:34: warning: variable 'tjxcoul' set but not used [-Wunused-but-set-variable] double tixcoul,tiycoul,tizcoul,tjxcoul,tjycoul,tjzcoul; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:355:34: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += qtmp*r3inv*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:353:35: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += -q[j]*r3inv*pidotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:351:29: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:351:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:355:28: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += qtmp*r3inv*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:360:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:419:70: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:419:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:419:54: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:416:47: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:416:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:416:31: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:419:70: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:419:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:419:54: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:424:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_long_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_long_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_gpu.cpp:283:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_gpu.cpp:284:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_gpu.cpp:288:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_gpu.cpp:287:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_long_gpu.cpp:275:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_long_gpu.cpp:276:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_long_gpu.cpp:280:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_long_gpu.cpp:280:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongGPU::init_style()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp:151:16: warning: unused variable 'cut' [-Wunused-variable] double cut = init_one(i,j); ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongGPU::init_style()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:154:10: warning: variable 'cut' set but not used [-Wunused-but-set-variable] double cut; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp:282:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp:287:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp:284:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp:284:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:319:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:324:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:328:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:321:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:321:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:328:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:306:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:311:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:315:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:308:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:308:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:283:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:278:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:287:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:280:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:70: warning: 'ecoul' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,ecoul,fpair,delx,dely,delz); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:70: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:280:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloyGPU::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp:377:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp:378:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp:379:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp:380:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp:405:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp:425:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFSGPU::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp:377:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp:378:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp:379:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp:380:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp:405:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp:427:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp:432:55: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized] if (me == 0) grab(fptr,file->nr,&file->rhor[i][1]); ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_sw_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_sw_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_sw_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp:443:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized] if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]); ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_tersoff_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_tersoff_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_tersoff_gpu.cpp [100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_tersoff_mod_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_tersoff_mod_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_tersoff_mod_gpu.cpp [100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_tersoff_zbl_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_tersoff_zbl_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_tersoff_zbl_gpu.cpp [100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_vashishta_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_vashishta_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_vashishta_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_vashishta_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairVashishtaGPU::init_style()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_vashishta_gpu.cpp:154:24: warning: unused variable 'r0eps' [-Wunused-variable] double *cutsq, *r0, *r0eps, *gamma, *eta; ^ [100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_cs_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_cs_gpu.cpp [100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_cs_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_cs_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:285:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:282:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:282:72: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:286:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] d[itype][jtype]*r6inv*r2inv - offset[itype][jtype]; ^ [100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_cs_gpu.cpp:326:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_cs_gpu.cpp:327:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_cs_gpu.cpp:331:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_cs_gpu.cpp:330:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongCSGPU::init_style()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp:156:16: warning: unused variable 'cut' [-Wunused-variable] double cut = init_one(i,j); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairCoulLongCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp:307:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp:312:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp:309:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp:309:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [100%] Linking CXX shared library liblammps.so /usr/bin/cmake3 -E cmake_link_script CMakeFiles/lammps.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -shared -Wl,-soname,liblammps.so.0 -o liblammps.so.0 @CMakeFiles/lammps.dir/objects1.rsp -Wl,-rpath,/usr/lib64/openmpi/lib: /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -lfftw3 -lpython3.4m -ljpeg -lpng -lz -lvoro++ -lm libatc.a libgpu.a -lopenblas -lOpenCL /usr/bin/cmake3 -E cmake_symlink_library liblammps.so.0 liblammps.so.0 liblammps.so make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' [100%] Built target lammps /usr/bin/make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' cd /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/CMakeFiles/lmp.dir/DependInfo.cmake --color= Scanning dependencies of target lmp make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' /usr/bin/make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' [100%] Building CXX object CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/main.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/openmpi-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIE -o CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/main.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/main.cpp [100%] Linking CXX executable lmp /usr/bin/cmake3 -E cmake_link_script CMakeFiles/lmp.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -rdynamic CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/main.cpp.o -o lmp -Wl,-rpath,/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi:/usr/lib64/openmpi/lib: liblammps.so.0 /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -lfftw3 -lpython3.4m -ljpeg -lpng -lz -lvoro++ -lm libatc.a -lopenblas libgpu.a -lOpenCL make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' [100%] Built target lmp make[1]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' /usr/bin/cmake3 -E cmake_progress_start /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/CMakeFiles 0 + . /etc/profile.d/modules.sh ++++ /bin/ps -p 70 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' mpi/openmpi-x86_64 = '' ']' +++ '[' /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core = '' ']' + module unload mpi/openmpi-x86_64 ++ /usr/bin/modulecmd sh unload mpi/openmpi-x86_64 + eval MANPATH=/usr/share/lmod/lmod/share/man:: ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib64/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON2_SITEARCH;unset' 'MPI_PYTHON3_SITEARCH;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' '_LMFILES_;' ++ MANPATH=/usr/share/lmod/lmod/share/man:: ++ export MANPATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ PKG_CONFIG_PATH=/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset LD_LIBRARY_PATH ++ unset LOADEDMODULES ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ unset _LMFILES_ + cd .. + cd mpich + . /etc/profile.d/modules.sh ++++ /bin/ps -p 70 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' '' = '' ']' +++ LOADEDMODULES= +++ export LOADEDMODULES +++ '[' /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core = '' ']' + module load mpi/mpich-x86_64 ++ /usr/bin/modulecmd sh load mpi/mpich-x86_64 + eval LD_LIBRARY_PATH=/usr/lib64/mpich/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/mpich-x86_64' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/mpich:/usr/share/lmod/lmod/share/man::' ';export' 'MANPATH;MPI_BIN=/usr/lib64/mpich/bin' ';export' 'MPI_BIN;MPI_COMPILER=mpich-x86_64' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich-x86_64' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib64/mpich' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/mpich-x86_64' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib64/mpich/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/mpich' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/mpich' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_mpich' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/mpich-x86_64' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:/usr/lib64/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;PYTHONPATH=/usr/lib64/python2.7/site-packages/mpich' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/mpich-x86_64' ';export' '_LMFILES_;' ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ LOADEDMODULES=mpi/mpich-x86_64 ++ export LOADEDMODULES ++ MANPATH=/usr/share/man/mpich:/usr/share/lmod/lmod/share/man:: ++ export MANPATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ MPI_COMPILER=mpich-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich-x86_64 ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/mpich-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/mpich ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/mpich ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/mpich-x86_64 ++ export MPI_SYSCONFIG ++ PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ PYTHONPATH=/usr/lib64/python2.7/site-packages/mpich ++ export PYTHONPATH ++ _LMFILES_=/etc/modulefiles/mpi/mpich-x86_64 ++ export _LMFILES_ + export 'CFLAGS=-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + CFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + CFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro ' + export LDFLAGS + /usr/bin/cmake3 -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -C ../cmake/presets/std_nolib.cmake -DBUILD_LIB=ON -DLIB_SUFFIX= -DPKG_PYTHON=ON -DPKG_VORONOI=ON -DPKG_USER-ATC=ON -DPKG_USER-OMP=ON -DENABLE_TESTING=ON -DPYTHON_INSTDIR=/usr/lib/python3.4/site-packages -DCMAKE_INSTALL_SYSCONFDIR=/etc -DPKG_GPU=1 -DGPU_API=OpenCL -DFFT=FFTW3 -DBUILD_MPI=ON -DPKG_MPIIO=ON -DCMAKE_INSTALL_BINDIR=/usr/lib64/mpich/bin -DCMAKE_INSTALL_LIBDIR=/usr/lib64/mpich/lib '-DCMAKE_EXE_LINKER_FLAGS=-Wl,-z,relro -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags' '-DCMAKE_SHARED_LINKER_FLAGS=-Wl,-z,relro -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags' ../cmake loading initial cache file ../cmake/presets/std_nolib.cmake -- The CXX compiler identification is GNU 4.8.5 -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Running check for auto-generated files from make-based build system -- Found MPI_CXX: /usr/lib64/mpich/lib/libmpichcxx.so (found version "3.0") -- Found MPI: TRUE (found version "3.0") -- Found OpenMP_CXX: -fopenmp (found version "3.1") -- Found OpenMP: TRUE (found version "3.1") -- Found PkgConfig: /usr/bin/pkg-config (found version "0.27.1") -- Checking for module 'fftw3' -- Found fftw3, version 3.3.3 -- Found FFTW3: /usr/lib64/libfftw3.so -- Looking for sgemm_ -- Looking for sgemm_ - found -- Looking for C++ include pthread.h -- Looking for C++ include pthread.h - found -- Looking for pthread_create -- Looking for pthread_create - found -- Found Threads: TRUE -- Found BLAS: /usr/lib64/libopenblas.so -- Looking for cheev_ -- Looking for cheev_ - found -- A library with LAPACK API found. -- Found PythonInterp: /usr/bin/python (found version "2.7.5") -- Found PythonLibs: /usr/lib64/libpython3.4m.so (found version "3.4.9") -- Found JPEG: /usr/lib64/libjpeg.so (found version "62") -- Found PNG: /usr/lib64/libpng.so (found version "1.5.13") -- Found ZLIB: /usr/lib64/libz.so (found version "1.2.7") -- Found GZIP: /usr/bin/gzip -- Could NOT find FFMPEG (missing: FFMPEG_EXECUTABLE) -- Found VORO: /usr/lib64/libvoro++.so -- Looking for C++ include math.h -- Looking for C++ include math.h - found -- Looking for CL_VERSION_2_2 -- Looking for CL_VERSION_2_2 - found -- Found OpenCL: /usr/lib64/libOpenCL.so (found version "2.2") Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/atom_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/beck_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/born_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/born_coul_long_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/born_coul_long_cs_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/born_coul_wolf_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/born_coul_wolf_cs_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/buck_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/buck_coul_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/buck_coul_long_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/charmm_long_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/colloid_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/coul_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/coul_debye_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/coul_dsf_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/coul_long_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/coul_long_cs_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/device_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/dipole_lj_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/dipole_lj_sf_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/dipole_long_lj_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/dpd_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/eam_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/ellipsoid_nbor_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/gauss_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/lj_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/lj96_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/lj_class2_long_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/lj_coul_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/lj_coul_debye_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/lj_coul_long_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/lj_coul_msm_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/lj_cubic_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/lj_dsf_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/lj_expand_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/lj_expand_coul_long_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/lj_gromacs_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/lj_sdk_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/lj_sdk_long_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/mie_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/morse_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/neighbor_cpu_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/neighbor_gpu_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/pppm_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/re_squared_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/re_squared_lj_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/soft_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/sw_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/table_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/tersoff_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/tersoff_mod_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/tersoff_zbl_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/ufm_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/vashishta_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/yukawa_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/yukawa_colloid_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/zbl_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/gayberne_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu/gayberne_lj_cl.h... -- Generating style_angle.h... -- Generating style_atom.h... -- Generating style_body.h... -- Generating style_bond.h... -- Generating style_command.h... -- Generating style_compute.h... -- Generating style_dihedral.h... -- Generating style_dump.h... -- Generating style_fix.h... -- Generating style_improper.h... -- Generating style_integrate.h... -- Generating style_kspace.h... -- Generating style_minimize.h... -- Generating style_nbin.h... -- Generating style_npair.h... -- Generating style_nstencil.h... -- Generating style_ntopo.h... -- Generating style_pair.h... -- Generating style_reader.h... -- Generating style_region.h... -- Generating lmpinstalledpkgs.h... -- Building package: ASPHERE -- Building package: BODY -- Building package: CLASS2 -- Building package: COLLOID -- Building package: DIPOLE -- Building package: GRANULAR -- Building package: KSPACE -- Building package: MANYBODY -- Building package: MC -- Building package: MISC -- Building package: MOLECULE -- Building package: PERI -- Building package: REPLICA -- Building package: RIGID -- Building package: SHOCK -- Building package: SNAP -- Building package: SRD -- Building package: PYTHON -- Building package: MPIIO -- Building package: VORONOI -- Building package: USER-ATC -- Building package: USER-OMP -- Building package: OPT -- Building package: GPU -- The following packages have been found: * MPI * OpenMP * PkgConfig * FFTW3 * BLAS * Threads * LAPACK * PythonInterp * PythonLibs * JPEG * PNG * ZLIB * VORO * OpenCL -- <<< Build configuration >>> Build type Install path /usr Compilers and Flags: C++ Compiler /usr/bin/c++ Type GNU Version 4.8.5 C++ Flags -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp Defines LAMMPS_SMALLBIG;LAMMPS_MEMALIGN=64;FFT_FFTW;LMP_PYTHON;LAMMPS_JPEG;LAMMPS_PNG;LAMMPS_GZIP -- Linker flags: Executable -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -- Shared libraries -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -- Link libraries: /usr/lib64/mpich/lib/libmpichcxx.so;/usr/lib64/mpich/lib/libmpich.so;/usr/lib64/mpich/lib/libopa.so;/usr/lib64/mpich/lib/libmpl.so;/usr/lib64/librt.so;/usr/lib64/libpthread.so;/usr/lib64/libfftw3.so;/usr/lib64/libpython3.4m.so;/usr/lib64/libjpeg.so;/usr/lib64/libpng.so;/usr/lib64/libz.so;/usr/lib64/libvoro++.so;m;atc;gpu -- Using mpi with headers in /usr/include/mpich-x86_64 and /usr/lib64/mpich/lib/libmpichcxx.so;/usr/lib64/mpich/lib/libmpich.so;/usr/lib64/mpich/lib/libopa.so;/usr/lib64/mpich/lib/libmpl.so;/usr/lib64/librt.so;/usr/lib64/libpthread.so -- GPU Api: OPENCL -- OCL Tune: GENERIC -- GPU Precision: MIXED -- Using FFTW3 as FFT -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_CXX_FLAGS_RELEASE CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE INCLUDE_INSTALL_DIR LIB_INSTALL_DIR SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/lammps-stable_22Aug2018/mpich + /usr/bin/make -j2 /usr/bin/cmake3 -H/builddir/build/BUILD/lammps-stable_22Aug2018/cmake -B/builddir/build/BUILD/lammps-stable_22Aug2018/mpich --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake3 -E cmake_progress_start /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/CMakeFiles /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[1]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' /usr/bin/make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/depend /usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' cd /builddir/build/BUILD/lammps-stable_22Aug2018/mpich && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/mpich /builddir/build/BUILD/lammps-stable_22Aug2018/mpich /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake --color= make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' cd /builddir/build/BUILD/lammps-stable_22Aug2018/mpich && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/mpich /builddir/build/BUILD/lammps-stable_22Aug2018/mpich /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/CMakeFiles/atc.dir/DependInfo.cmake --color= Scanning dependencies of target ocl_get_devices make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' /usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' [ 0%] Building CXX object CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ucl_get_devices.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DUCL_OPENCL -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIE -o CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ucl_get_devices.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ucl_get_devices.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ucl_get_devices.cpp:25:0: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ Scanning dependencies of target atc make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' /usr/bin/make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' [ 0%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Coupling.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Coupling.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Coupling.cpp [ 1%] Linking CXX executable ocl_get_devices /usr/bin/cmake3 -E cmake_link_script CMakeFiles/ocl_get_devices.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -rdynamic CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ucl_get_devices.cpp.o -o ocl_get_devices -lOpenCL make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' [ 1%] Built target ocl_get_devices /usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' cd /builddir/build/BUILD/lammps-stable_22Aug2018/mpich && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/mpich /builddir/build/BUILD/lammps-stable_22Aug2018/mpich /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/CMakeFiles/gpu.dir/DependInfo.cmake --color= Scanning dependencies of target gpu make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' /usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' [ 1%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp: In member function 'double LAMMPS_AL::Answer::energy_virial(double*, double**, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp:182:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses] if (_ef_atom) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp:196:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses] if (_vf_atom) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp: In member function 'double LAMMPS_AL::Answer::energy_virial(double*, double**, double*, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp:231:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses] if (_ef_atom) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp:250:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses] if (_vf_atom) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp: In instantiation of 'double LAMMPS_AL::Answer::energy_virial(double*, double**, double*, double&) [with numtyp = float; acctyp = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp:313:16: required from here /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp:224:7: warning: unused variable 'ii' [-Wunused-variable] int ii, vstart=0, iend=_inum; ^ [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.cpp:17: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Coupling.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Coupling.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.cpp:17: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 2%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingEnergy.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingEnergy.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingEnergy.cpp [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dpd.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dpd.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dpd.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dpd.cpp:17: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.cpp [ 2%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMass.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMass.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMass.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 2%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentum.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentum.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentum.cpp [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Coupling.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentum.h:7, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentum.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 3%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentumEnergy.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentumEnergy.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentumEnergy.cpp [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Coupling.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentumEnergy.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentumEnergy.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 3%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.cpp [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 4%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Transfer.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Transfer.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Transfer.cpp [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Transfer.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Transfer.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.cpp [ 5%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferKernel.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferKernel.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferKernel.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Transfer.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferKernel.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferKernel.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 5%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferPartitionOfUnity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferPartitionOfUnity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferPartitionOfUnity.cpp [ 5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Transfer.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferPartitionOfUnity.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferPartitionOfUnity.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomToMoleculeTransfer.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomToMoleculeTransfer.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomToMoleculeTransfer.cpp [ 6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dpd.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dpd.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.cpp [ 7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.cpp: In instantiation of 'void LAMMPS_AL::EAM::loop(bool, bool) [with numtyp = float; acctyp = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.cpp:533:16: required from here /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.cpp:448:14: warning: variable 'vflag' set but not used [-Wunused-but-set-variable] int eflag, vflag; ^ [ 7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_alloy_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_alloy_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_alloy_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_alloy_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_fs_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_fs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_fs_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_fs_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/BodyForce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/BodyForce.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/BodyForce.cpp [ 8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne.cpp [ 8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CBLattice.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CBLattice.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CBLattice.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne.cpp:27: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CauchyBorn.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CauchyBorn.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CauchyBorn.cpp [ 8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CbPotential.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CbPotential.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CbPotential.cpp [ 8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ChargeRegulator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ChargeRegulator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ChargeRegulator.cpp [ 8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ChargeRegulator.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ChargeRegulator.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long.cpp [ 9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ConcentrationRegulator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ConcentrationRegulator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ConcentrationRegulator.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic.cpp [ 9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElasticTimeIntegrator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElasticTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElasticTimeIntegrator.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeIntegrator.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElasticTimeIntegrator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElasticTimeIntegrator.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronChargeDensity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronChargeDensity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronChargeDensity.cpp [ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_ext.cpp [ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronDragPower.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronDragPower.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronDragPower.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs.cpp [ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronFlux.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronFlux.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronFlux.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk.cpp [ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronHeatCapacity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronHeatCapacity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronHeatCapacity.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long.cpp [ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronHeatFlux.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronHeatFlux.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronHeatFlux.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronPhononExchange.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronPhononExchange.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronPhononExchange.cpp [ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModel.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModel.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModel.cpp [ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor.cpp:18: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor_shared.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor_shared.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor_shared.cpp [ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelDriftDiffusion.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_kernel.h:27:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor_shared.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor_shared.cpp:17: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm.cpp:25: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModel.h:8, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelTwoTemperature.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelDriftDiffusion.h:8, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelDriftDiffusion.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared.cpp:27: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelElectrostatic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelElectrostatic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelElectrostatic.cpp [ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModel.h:8, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelElectrostatic.h:7, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelElectrostatic.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelTwoTemperature.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelTwoTemperature.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelTwoTemperature.cpp [ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModel.h:8, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelTwoTemperature.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelTwoTemperature.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Element.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Element.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Element.cpp [ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl_ext.cpp [ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Engine.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Engine.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Engine.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm.h:21, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm.cpp:26: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm.h:21, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm_ext.cpp:22: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Engine.h:9, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Engine.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Interpolate.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Interpolate.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Interpolate.cpp [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 14%] Linking CXX static library libgpu.a /usr/bin/cmake3 -P CMakeFiles/gpu.dir/cmake_clean_target.cmake /usr/bin/cmake3 -E cmake_link_script CMakeFiles/gpu.dir/link.txt --verbose=1 /usr/bin/ar qc libgpu.a CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dpd.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_alloy_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_fs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor_shared.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl_ext.cpp.o /usr/bin/ranlib libgpu.a make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' [ 14%] Built target gpu [ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Mesh.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Mesh.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Mesh.cpp [ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldEulerIntegrator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldEulerIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldEulerIntegrator.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldEulerIntegrator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldEulerIntegrator.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldManager.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldManager.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldManager.cpp [ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Function.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Function.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Function.cpp [ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FundamentalAtomicQuantity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FundamentalAtomicQuantity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FundamentalAtomicQuantity.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldManager.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldManager.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/GhostManager.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/GhostManager.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/GhostManager.cpp [ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ImplicitSolveOperator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ImplicitSolveOperator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ImplicitSolveOperator.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ImplicitSolveOperator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ImplicitSolveOperator.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/InterscaleOperators.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/InterscaleOperators.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/InterscaleOperators.cpp [ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KD_Tree.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KD_Tree.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KD_Tree.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixDef.h:23:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Array.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Array2D.h:9, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KD_Tree.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KD_Tree.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function] static std::string to_cap(const std::string &s) { ^ [ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KernelFunction.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KernelFunction.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KernelFunction.cpp [ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KinetoThermostat.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KinetoThermostat.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KinetoThermostat.cpp [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Kinetostat.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Kinetostat.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Kinetostat.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KinetoThermostat.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KinetoThermostat.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Kinetostat.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Kinetostat.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.h:25, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LinearSolver.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LinearSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LinearSolver.cpp [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MPI_Wrappers.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MPI_Wrappers.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MPI_Wrappers.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MPI_Wrappers.cpp:2:0: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function] static std::string to_cap(const std::string &s) { ^ [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Material.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Material.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Material.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LinearSolver.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LinearSolver.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Matrix.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Matrix.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Matrix.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixDef.h:23:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Matrix.h:3, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Matrix.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function] static std::string to_cap(const std::string &s) { ^ [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MeshReader.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MeshReader.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MeshReader.cpp [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MoleculeSet.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MoleculeSet.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MoleculeSet.cpp [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/NonLinearSolver.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/NonLinearSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/NonLinearSolver.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/NonLinearSolver.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/NonLinearSolver.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/OutputManager.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/OutputManager.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/OutputManager.cpp [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PaqAtcUtility.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PaqAtcUtility.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PaqAtcUtility.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/OutputManager.cpp: In member function 'void ATC::OutputManager::read_restart_file(std::string, ATC::RESTART_LIST*)': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/OutputManager.cpp:164:42: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&myVal,sizeof(double),1,fp); ^ [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParDiagonalMatrix.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParDiagonalMatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParDiagonalMatrix.cpp [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParSparseMatrix.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParSparseMatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParSparseMatrix.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixDef.h:23:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Matrix.h:3, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/DenseMatrix.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParDiagonalMatrix.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParDiagonalMatrix.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function] static std::string to_cap(const std::string &s) { ^ [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantityLibrary.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantityLibrary.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantityLibrary.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParSparseMatrix.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParSparseMatrix.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixDef.h:23:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Matrix.h:3, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/DenseMatrix.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParSparseMatrix.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParSparseMatrix.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Utility.h: At global scope: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function] static std::string to_cap(const std::string &s) { ^ [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerPairQuantity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerPairQuantity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerPairQuantity.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.h:25, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerPairQuantity.h:7, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerPairQuantity.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PhysicsModel.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PhysicsModel.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PhysicsModel.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.h:25, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantity.h:7, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantityLibrary.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantityLibrary.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PoissonSolver.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PoissonSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PoissonSolver.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PhysicsModel.h:8, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PhysicsModel.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PolynomialSolver.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PolynomialSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PolynomialSolver.cpp [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PrescribedDataManager.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PrescribedDataManager.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PrescribedDataManager.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LinearSolver.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PoissonSolver.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PoissonSolver.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Quadrature.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Quadrature.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Quadrature.cpp [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SchrodingerSolver.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SchrodingerSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SchrodingerSolver.cpp [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SpeciesTimeIntegrator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SpeciesTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SpeciesTimeIntegrator.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LinearSolver.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SchrodingerSolver.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SchrodingerSolver.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Stress.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Stress.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Stress.cpp [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ThermalTimeIntegrator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ThermalTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ThermalTimeIntegrator.cpp [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Thermostat.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Thermostat.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Thermostat.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeIntegrator.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ThermalTimeIntegrator.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ThermalTimeIntegrator.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeFilter.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeFilter.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeFilter.cpp [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeIntegrator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeIntegrator.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Thermostat.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Thermostat.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferLibrary.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferLibrary.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferLibrary.cpp [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferOperator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferOperator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferOperator.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.h:25, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantity.h:7, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantityLibrary.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferOperator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferOperator.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Vector.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Vector.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Vector.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixDef.h:23:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Matrix.h:3, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Vector.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/DenseVector.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Vector.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function] static std::string to_cap(const std::string &s) { ^ [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ViscousStress.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ViscousStress.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ViscousStress.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.h:25, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantity.h:7, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantityLibrary.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferOperator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferLibrary.h:11, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferLibrary.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationChargeDiffusion.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationChargeDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationChargeDiffusion.cpp [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationDiffusion.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationDiffusion.cpp [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronContinuity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronContinuity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronContinuity.cpp [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronMomentum.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronMomentum.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronMomentum.cpp [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronTemperature.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronTemperature.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronTemperature.cpp [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationMassDiffusion.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationMassDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationMassDiffusion.cpp [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationMomentum.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationMomentum.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationMomentum.cpp [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationPhononTemperature.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationPhononTemperature.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationPhononTemperature.cpp [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationPoisson.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationPoisson.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationPoisson.cpp [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationSchrodinger.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationSchrodinger.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationSchrodinger.cpp [ 19%] Linking CXX static library libatc.a /usr/bin/cmake3 -P CMakeFiles/atc.dir/cmake_clean_target.cmake /usr/bin/cmake3 -E cmake_link_script CMakeFiles/atc.dir/link.txt --verbose=1 /usr/bin/ar qc libatc.a CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Coupling.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingEnergy.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMass.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentum.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentumEnergy.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Transfer.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferKernel.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferPartitionOfUnity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomToMoleculeTransfer.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/BodyForce.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CBLattice.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CauchyBorn.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CbPotential.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ChargeRegulator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ConcentrationRegulator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElasticTimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronChargeDensity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronDragPower.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronFlux.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronHeatCapacity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronHeatFlux.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronPhononExchange.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModel.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelElectrostatic.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelTwoTemperature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Element.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Engine.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Interpolate.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Mesh.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldEulerIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Function.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FundamentalAtomicQuantity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/GhostManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ImplicitSolveOperator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/InterscaleOperators.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KD_Tree.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KernelFunction.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KinetoThermostat.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Kinetostat.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LinearSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MPI_Wrappers.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Material.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Matrix.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MeshReader.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MoleculeSet.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/NonLinearSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/OutputManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PaqAtcUtility.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParDiagonalMatrix.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParSparseMatrix.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantityLibrary.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerPairQuantity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PhysicsModel.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PoissonSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PolynomialSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PrescribedDataManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Quadrature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SchrodingerSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SpeciesTimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Stress.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ThermalTimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Thermostat.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeFilter.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferLibrary.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferOperator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Vector.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ViscousStress.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationChargeDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronContinuity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronMomentum.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronTemperature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationMassDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationMomentum.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationPhononTemperature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationPoisson.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationSchrodinger.cpp.o /usr/bin/ranlib libatc.a make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' [ 19%] Built target atc /usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' cd /builddir/build/BUILD/lammps-stable_22Aug2018/mpich && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/mpich /builddir/build/BUILD/lammps-stable_22Aug2018/mpich /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/CMakeFiles/lammps.dir/DependInfo.cmake --color= Scanning dependencies of target lammps make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' /usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' [ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_hybrid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_hybrid.cpp [ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/angle.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/angle.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/angle.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_hybrid.cpp: In member function 'virtual void LAMMPS_NS::AngleHybrid::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_hybrid.cpp:338:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nstyles,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_hybrid.cpp:347:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_hybrid.cpp:350:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(keywords[m],sizeof(char),n,fp); ^ [ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_zero.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_zero.cpp [ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_zero.cpp: In member function 'virtual void LAMMPS_NS::AngleZero::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_zero.cpp:133:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&theta0[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom.cpp: In member function 'int LAMMPS_NS::Atom::memcheck(const char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom.cpp:2280:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if (strlen(memstr) + n >= memlength) { ^ [ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_map.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_map.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_map.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom.cpp: In member function 'void LAMMPS_NS::Atom::data_atoms(int, char*, LAMMPS_NS::tagint, LAMMPS_NS::tagint, int, int, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom.cpp:938:48: warning: 'iptr' may be used uninitialized in this function [-Wmaybe-uninitialized] imagedata = ((imageint) (atoi(values[iptr]) + IMGMAX) & IMGMASK) | ^ [ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec.cpp [ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_atomic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_atomic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_atomic.cpp [ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_body.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_body.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_body.cpp [ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_charge.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_charge.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_charge.cpp [ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_ellipsoid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_ellipsoid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_ellipsoid.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_hybrid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_hybrid.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_line.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_line.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_line.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_sphere.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_tri.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/balance.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/balance.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/balance.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/body.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/body.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/body.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/bond.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/bond.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/bond.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_hybrid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_hybrid.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_zero.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_zero.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_hybrid.cpp: In member function 'virtual void LAMMPS_NS::BondHybrid::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_hybrid.cpp:322:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nstyles,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_hybrid.cpp:331:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_hybrid.cpp:334:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(keywords[m],sizeof(char),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_zero.cpp: In member function 'virtual void LAMMPS_NS::BondZero::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_zero.cpp:131:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[1],sizeof(double),atom->nbondtypes,fp); ^ [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/change_box.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/change_box.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/change_box.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/citeme.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/citeme.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/citeme.cpp [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/comm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/comm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/comm.cpp [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_brick.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_brick.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_brick.cpp [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_tiled.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_tiled.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_tiled.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_brick.cpp: In member function 'virtual void LAMMPS_NS::CommBrick::borders()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_brick.cpp:712:28: warning: 'nfirst' may be used uninitialized in this function [-Wmaybe-uninitialized] int nsend,nrecv,sendflag,nfirst,nlast,ngroup; ^ [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_tiled.cpp: In member function 'void LAMMPS_NS::CommTiled::box_drop_brick(int, double*, double*, int&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_tiled.cpp:1500:17: warning: 'dir' may be used uninitialized in this function [-Wmaybe-uninitialized] index += dir; ^ [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_aggregate_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_aggregate_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_aggregate_atom.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_tiled.cpp: In member function 'virtual void LAMMPS_NS::CommTiled::borders()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_tiled.cpp:818:9: warning: 'nlast' may be used uninitialized in this function [-Wmaybe-uninitialized] for (i = atom->nlocal; i < nlast; i++) { ^ [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle.cpp [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle_local.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle_local.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle_local.cpp [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angmom_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angmom_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angmom_chunk.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle_local.cpp: In member function 'int LAMMPS_NS::ComputeAngleLocal::compute_angles(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle_local.cpp:169:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] tagprev = tag[atom2] - iatom - 1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle_local.cpp:167:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] if (tag[atom2] != onemols[imol]->angle_atom2[atom2][i]) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle_local.cpp:208:22: warning: 'ebuf' may be used uninitialized in this function [-Wmaybe-uninitialized] else ebuf[n] = 0.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle_local.cpp:202:17: warning: 'tbuf' may be used uninitialized in this function [-Wmaybe-uninitialized] tbuf[n] = 180.0*acos(c)/MY_PI; ^ [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond.cpp [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_centro_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_centro_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_centro_atom.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp: In member function 'int LAMMPS_NS::ComputeBondLocal::compute_bonds(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp:315:28: warning: 'engrot' may be used uninitialized in this function [-Wmaybe-uninitialized] ptr[n] = engrot; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp:312:28: warning: 'engvib' may be used uninitialized in this function [-Wmaybe-uninitialized] ptr[n] = engvib; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp:318:30: warning: 'engtrans' may be used uninitialized in this function [-Wmaybe-uninitialized] ptr[n] = engtrans; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp:306:28: warning: 'engpot' may be used uninitialized in this function [-Wmaybe-uninitialized] ptr[n] = engpot; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp:321:34: warning: 'omegasq' may be used uninitialized in this function [-Wmaybe-uninitialized] ptr[n] = sqrt(omegasq); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp:324:26: warning: 'vvib' may be used uninitialized in this function [-Wmaybe-uninitialized] ptr[n] = vvib; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp:201:47: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] btype = onemols[imol]->bond_type[iatom][i]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp:201:29: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] btype = onemols[imol]->bond_type[iatom][i]; ^ [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_cluster_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_cluster_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_cluster_atom.cpp [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_cna_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_cna_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_cna_atom.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin1d()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:1512:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized] if (xremap < boxlo[idim]) xremap += prd[idim]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:1513:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized] if (xremap >= boxhi[idim]) xremap -= prd[idim]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:1512:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized] if (xremap < boxlo[idim]) xremap += prd[idim]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin2d()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:1614:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized] if (yremap < boxlo[jdim]) yremap += prd[jdim]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:1615:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized] if (yremap >= boxhi[jdim]) yremap -= prd[jdim]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:1614:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized] if (yremap < boxlo[jdim]) yremap += prd[jdim]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin3d()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:1747:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized] if (zremap < boxlo[kdim]) zremap += prd[kdim]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:1748:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized] if (zremap >= boxhi[kdim]) zremap -= prd[kdim]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:1747:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized] if (zremap < boxlo[kdim]) zremap += prd[kdim]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp: In constructor 'LAMMPS_NS::ComputeChunkAtom::ComputeChunkAtom(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:413:29: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized] delta[idim] *= scale; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:263:59: warning: 'idim' may be used uninitialized in this function [-Wmaybe-uninitialized] maxvalue[idim] = force->numeric(FLERR,arg[iarg+3]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:197:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized] if (strcmp(arg[iarg],"region") == 0) { ^ [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_com.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_com.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_com.cpp [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_com_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_com_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_com_chunk.cpp [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_contact_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_contact_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_contact_atom.cpp [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_coord_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_coord_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_coord_atom.cpp [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral.cpp [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral_local.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral_local.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral_local.cpp [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dipole_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dipole_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dipole_chunk.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral_local.cpp: In member function 'int LAMMPS_NS::ComputeDihedralLocal::compute_dihedrals(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral_local.cpp:162:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] tagprev = tag[atom2] - iatom - 1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral_local.cpp:161:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] if (tag[atom2] != onemols[imol]->dihedral_atom2[atom2][i]) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral_local.cpp:219:17: warning: 'pbuf' may be used uninitialized in this function [-Wmaybe-uninitialized] pbuf[n] = 180.0*atan2(s,c)/MY_PI; ^ [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_displace_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_displace_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_displace_atom.cpp [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_erotate_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_erotate_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_erotate_sphere.cpp [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_erotate_sphere_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_erotate_sphere_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_erotate_sphere_atom.cpp [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_fragment_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_fragment_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_fragment_atom.cpp [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_global_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_global_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_global_atom.cpp [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_group_group.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_group_group.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_group_group.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_global_atom.cpp: In member function 'virtual void LAMMPS_NS::ComputeGlobalAtom::compute_peratom()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_global_atom.cpp:521:29: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized] if (j >= 0 && j < vmax) array_atom[i][m] = source[j]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_global_atom.cpp:452:29: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized] if (j >= 0 && j < vmax) array_atom[i][m] = source[j]; ^ [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_gyration.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_gyration.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_gyration.cpp [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_gyration_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_gyration_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_gyration_chunk.cpp [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_heat_flux.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_heat_flux.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_heat_flux.cpp [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_hexorder_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_hexorder_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_hexorder_atom.cpp [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper.cpp [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper_local.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper_local.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper_local.cpp [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_inertia_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_inertia_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_inertia_chunk.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper_local.cpp: In member function 'int LAMMPS_NS::ComputeImproperLocal::compute_impropers(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper_local.cpp:163:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] tagprev = tag[atom2] - iatom - 1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper_local.cpp:162:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] if (tag[atom2] != onemols[imol]->improper_atom2[atom2][i]) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper_local.cpp:218:17: warning: 'cbuf' may be used uninitialized in this function [-Wmaybe-uninitialized] cbuf[n] = 180.0*acos(c)/MY_PI; ^ [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_ke.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_ke.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_ke.cpp [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_ke_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_ke_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_ke_atom.cpp [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_msd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_msd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_msd.cpp [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_msd_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_msd_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_msd_chunk.cpp [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_omega_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_omega_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_omega_chunk.cpp [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_orientorder_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_orientorder_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_orientorder_atom.cpp [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pair.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pair.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pair.cpp [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pair_local.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pair_local.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pair_local.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pe.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pe.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pe.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pe_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pe_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pe_atom.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pressure.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pressure.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pressure.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_property_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_property_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_property_atom.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pressure.cpp: In member function 'virtual double LAMMPS_NS::ComputePressure::compute_scalar()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pressure.cpp:205:42: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] scalar = (temperature->dof * boltz * t + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pressure.cpp: In member function 'virtual void LAMMPS_NS::ComputePressure::compute_vector()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pressure.cpp:243:33: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized] vector[i] = (ke_tensor[i] + virial[i]) * inv_volume * nktv2p; ^ [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_property_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_property_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_property_chunk.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_property_local.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_property_local.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_property_local.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_rdf.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_rdf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_rdf.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_reduce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_reduce.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_reduce.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_reduce_region.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_reduce_region.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_reduce_region.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_slice.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_slice.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_slice.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_stress_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_stress_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_stress_atom.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_chunk.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_com.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_com.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_com.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_deform.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_deform.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_deform.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_partial.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_partial.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_profile.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_profile.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_profile.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_ramp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_ramp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_ramp.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_region.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_region.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_region.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_sphere.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_torque_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_torque_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_torque_chunk.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_vacf.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_vacf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_vacf.cpp [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_vcm_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_vcm_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_vcm_chunk.cpp [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/create_atoms.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/create_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_atoms.cpp [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/create_bonds.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/create_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_bonds.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_atoms.cpp: In member function 'void LAMMPS_NS::CreateAtoms::add_random()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_atoms.cpp:656:55: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized] coord[1] < boxlo[1] || coord[1] >= boxhi[1] || ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_atoms.cpp:656:31: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized] coord[1] < boxlo[1] || coord[1] >= boxhi[1] || ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_atoms.cpp: In member function 'void LAMMPS_NS::CreateAtoms::command(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_atoms.cpp:228:46: warning: 'molseed' may be used uninitialized in this function [-Wmaybe-uninitialized] ranmol = new RanMars(lmp,molseed+comm->me); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_atoms.cpp:118:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized] if (strcmp(arg[iarg],"basis") == 0) { ^ [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/create_box.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/create_box.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_box.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_bonds.cpp: In member function 'void LAMMPS_NS::CreateBonds::command(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_bonds.cpp:110:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized] if (strcmp(arg[iarg],"special") == 0) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_bonds.cpp:129:10: warning: 'style' may be used uninitialized in this function [-Wmaybe-uninitialized] } else if (style == SANGLE) { ^ [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/delete_atoms.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/delete_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/delete_atoms.cpp [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/delete_bonds.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/delete_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/delete_bonds.cpp [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral.cpp [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_hybrid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_hybrid.cpp [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_zero.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_zero.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_hybrid.cpp: In member function 'virtual void LAMMPS_NS::DihedralHybrid::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_hybrid.cpp:323:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nstyles,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_hybrid.cpp:332:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_hybrid.cpp:335:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(keywords[m],sizeof(char),n,fp); ^ [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/displace_atoms.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/displace_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/displace_atoms.cpp [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/domain.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/domain.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/domain.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/displace_atoms.cpp: In member function 'void LAMMPS_NS::DisplaceAtoms::command(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/displace_atoms.cpp:128:5: warning: 'd_dim' may be used uninitialized in this function [-Wmaybe-uninitialized] if (d_dim == 0) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/displace_atoms.cpp:146:5: warning: 'coord_dim' may be used uninitialized in this function [-Wmaybe-uninitialized] if (coord_dim == 0) { ^ [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/domain.cpp: In member function 'void LAMMPS_NS::Domain::box_too_small_check()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/domain.cpp:853:43: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] if (onemols[imol]->bond_type[iatom][j] < 0) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/domain.cpp:853:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] if (onemols[imol]->bond_type[iatom][j] < 0) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/domain.cpp: In member function 'void LAMMPS_NS::Domain::image_check()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/domain.cpp:754:43: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] if (onemols[imol]->bond_type[iatom][j] < 0) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/domain.cpp:754:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] if (onemols[imol]->bond_type[iatom][j] < 0) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump.cpp: In member function 'virtual void LAMMPS_NS::Dump::write()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump.cpp:511:20: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized] atom->v = vhold; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump.cpp:510:20: warning: 'xhold' may be used uninitialized in this function [-Wmaybe-uninitialized] atom->x = xhold; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump.cpp:512:28: warning: 'imagehold' may be used uninitialized in this function [-Wmaybe-uninitialized] atom->image = imagehold; ^ [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_atom.cpp [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_cfg.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_cfg.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_cfg.cpp [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_custom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_custom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_custom.cpp [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_dcd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_dcd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_dcd.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_custom.cpp: In member function 'virtual int LAMMPS_NS::DumpCustom::count()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_custom.cpp:1026:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses] if (choose[i] && (*ptr == 0.0 && values[i] == 0.0) || ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_custom.cpp:1031:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses] if (choose[i] && (*ptr == 0.0 && value == 0.0) || ^ [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_custom.cpp:1032:30: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized] (*ptr != 0.0 && value != 0.0)) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_custom.cpp:1027:41: warning: 'values' may be used uninitialized in this function [-Wmaybe-uninitialized] (*ptr != 0.0 && values[i] != 0.0)) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_custom.cpp:528:18: warning: 'ptrhold' may be used uninitialized in this function [-Wmaybe-uninitialized] double *ptr,*ptrhold; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp: In member function 'void LAMMPS_NS::DumpImage::create_image()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp:1033:66: warning: 'color2' may be used uninitialized in this function [-Wmaybe-uninitialized] image->draw_cylinder(xmid,x[atom2],color2,diameter,3); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp:1027:66: warning: 'color1' may be used uninitialized in this function [-Wmaybe-uninitialized] image->draw_cylinder(x[atom1],xmid,color1,diameter,3); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp:968:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] btype = atom->map(onemols[imol]->bond_type[iatom][m]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp:968:41: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] btype = atom->map(onemols[imol]->bond_type[iatom][m]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp:831:55: warning: 'color' may be used uninitialized in this function [-Wmaybe-uninitialized] image->draw_cylinder(pt1,pt2,color,ldiamvalue,3); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp:1036:72: warning: 'diameter' may be used uninitialized in this function [-Wmaybe-uninitialized] } else image->draw_cylinder(x[atom1],x[atom2],color,diameter,3); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp: In member function 'virtual int LAMMPS_NS::DumpImage::modify_param(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp:1300:23: warning: 'factor' may be used uninitialized in this function [-Wmaybe-uninitialized] int n = 6 + factor*nentry; ^ [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_local.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_local.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_local.cpp [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_movie.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_movie.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_movie.cpp [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_xyz.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_xyz.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_xyz.cpp [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/error.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/error.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/error.cpp [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/finish.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/finish.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/finish.cpp [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/finish.cpp: In member function 'void LAMMPS_NS::Finish::end(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/finish.cpp:776:33: warning: 'nneighfull' may be used uninitialized in this function [-Wmaybe-uninitialized] tmp = MAX(nneigh,nneighfull); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/finish.cpp:776:33: warning: 'nneigh' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_adapt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_adapt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_adapt.cpp [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_addforce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_addforce.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_addforce.cpp [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_atom.cpp [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_chunk.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_chunk.cpp: In member function 'virtual void LAMMPS_NS::FixAveChunk::end_of_step()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_chunk.cpp:1058:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result] if (fileend > 0) ftruncate(fileno(fp),fileend); ^ [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_correlate.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_correlate.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_correlate.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_correlate.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelate::end_of_step()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_correlate.cpp:537:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result] if (fileend > 0) ftruncate(fileno(fp),fileend); ^ [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_correlate.cpp:482:34: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized] values[lastindex][i] = scalar; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo.cpp: In member function 'virtual void LAMMPS_NS::FixAveHisto::end_of_step()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo.cpp:828:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result] if (fileend > 0) ftruncate(fileno(fp),fileend); ^ [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo_weight.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo_weight.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo_weight.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo_weight.cpp: In member function 'virtual void LAMMPS_NS::FixAveHistoWeight::end_of_step()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo_weight.cpp:499:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result] if (fileend > 0) ftruncate(fileno(fp),fileend); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo.cpp: In constructor 'LAMMPS_NS::FixAveHisto::FixAveHisto(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo.cpp:233:10: warning: 'kindflag' may be used uninitialized in this function [-Wmaybe-uninitialized] else if (kindflag != kind) ^ [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_aveforce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_aveforce.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_aveforce.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp:700:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result] if (fileend > 0) ftruncate(fileno(fp),fileend); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_vector(LAMMPS_NS::bigint)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp:911:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result] if (fileend > 0) ftruncate(fileno(fp),fileend); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp: In member function 'int LAMMPS_NS::FixAveTime::column_length(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp:971:9: warning: 'lengthone' may be used uninitialized in this function [-Wmaybe-uninitialized] if (lengthone != nrows) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp:629:29: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized] else vector[i] += scalar; ^ [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_balance.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_balance.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_balance.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp: In constructor 'LAMMPS_NS::FixAveTime::FixAveTime(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp:411:9: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized] if (value == -1) ^ [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_box_relax.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_box_relax.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_box_relax.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_balance.cpp: In member function 'void LAMMPS_NS::FixBalance::rebalance()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_balance.cpp:298:67: warning: 'sendproc' may be used uninitialized in this function [-Wmaybe-uninitialized] if (lbstyle == BISECTION) irregular->migrate_atoms(0,1,sendproc); ^ [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_controller.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_controller.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_controller.cpp [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_deform.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_deform.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_deform.cpp [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_deprecated.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_deprecated.cpp [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_drag.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_drag.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_drag.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_deform.cpp: In constructor 'LAMMPS_NS::FixDeform::FixDeform(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_deform.cpp:184:18: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized] set[index].style = VARIABLE; ^ [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_dt_reset.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_dt_reset.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_dt_reset.cpp [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_enforce2d.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_enforce2d.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_enforce2d.cpp [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_external.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_external.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_external.cpp [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_gravity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_gravity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_gravity.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_group.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_group.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_group.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_halt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_halt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_halt.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_heat.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_heat.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_heat.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_indent.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_indent.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_indent.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_langevin.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_langevin.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_langevin.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_lineforce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_lineforce.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_lineforce.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_minimize.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_minimize.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_minimize.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_momentum.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_momentum.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_momentum.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_move.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_move.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_move.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_move.cpp: In member function 'virtual void LAMMPS_NS::FixMove::initial_integrate(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_move.cpp:847:61: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized] if (zvarstyle == EQUAL) x[i][2] = xoriginal[i][2] + dz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_move.cpp:817:61: warning: 'dy' may be used uninitialized in this function [-Wmaybe-uninitialized] if (yvarstyle == EQUAL) x[i][1] = xoriginal[i][1] + dy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_move.cpp:787:61: warning: 'dx' may be used uninitialized in this function [-Wmaybe-uninitialized] if (xvarstyle == EQUAL) x[i][0] = xoriginal[i][0] + dx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_move.cpp: In constructor 'LAMMPS_NS::FixMove::FixMove(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_move.cpp:176:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized] if (strcmp(arg[iarg],"units") == 0) { ^ [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_neigh_history.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_neigh_history.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_neigh_history.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nh.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nh.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nh.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_neigh_history.cpp:17:0: /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_neigh_history.h: In constructor 'LAMMPS_NS::FixNeighHistory::FixNeighHistory(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_neigh_history.h:76:12: warning: 'LAMMPS_NS::FixNeighHistory::valuepartner' will be initialized after [-Wreorder] double **valuepartner; // values for the partners ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_neigh_history.h:34:15: warning: 'LAMMPS_NS::Pair* LAMMPS_NS::FixNeighHistory::pair' [-Wreorder] class Pair *pair; // ptr to pair style that uses neighbor history ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_neigh_history.cpp:36:1: warning: when initialized here [-Wreorder] FixNeighHistory::FixNeighHistory(LAMMPS *lmp, int narg, char **arg) : ^ [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nh_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nh_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nh_sphere.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nph.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nph.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nph.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nph_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nph_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nph_sphere.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_npt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_npt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_npt.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_npt_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_npt_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_npt_sphere.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve_limit.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve_limit.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve_limit.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve_noforce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve_noforce.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve_noforce.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve_sphere.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nvt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nvt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nvt.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nvt_sllod.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nvt_sllod.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nvt_sllod.cpp [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nvt_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nvt_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nvt_sphere.cpp [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_planeforce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_planeforce.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_planeforce.cpp [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_press_berendsen.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_press_berendsen.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_press_berendsen.cpp [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_print.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_print.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_print.cpp [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_property_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_property_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_property_atom.cpp [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_read_restart.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_read_restart.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_read_restart.cpp [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_recenter.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_recenter.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_recenter.cpp [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_respa.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_respa.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_respa.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_recenter.cpp: In member function 'virtual void LAMMPS_NS::FixRecenter::initial_integrate(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_recenter.cpp:182:41: warning: 'bboxhi' may be used uninitialized in this function [-Wmaybe-uninitialized] ztarget = bboxlo[2] + zcom*(bboxhi[2] - bboxlo[2]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_recenter.cpp:182:53: warning: 'bboxlo' may be used uninitialized in this function [-Wmaybe-uninitialized] ztarget = bboxlo[2] + zcom*(bboxhi[2] - bboxlo[2]); ^ [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_restrain.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_restrain.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_restrain.cpp [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_setforce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_setforce.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_setforce.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_restrain.cpp: In member function 'void LAMMPS_NS::FixRestrain::restrain_dihedral(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_restrain.cpp:566:33: warning: 'ddf1' may be used uninitialized in this function [-Wmaybe-uninitialized] df1 = df1*cos_target[m] - ddf1*sin_target[m]; ^ [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring_chunk.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring_rg.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring_rg.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring_rg.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring_self.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring_self.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring_self.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_store.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_store.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_store.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_store_force.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_store_force.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_store_force.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_store_state.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_store_state.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_store_state.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_berendsen.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_berendsen.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_berendsen.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_csld.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_csld.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_csld.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_csvr.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_csvr.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_csvr.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_rescale.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_rescale.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_rescale.cpp [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_tmd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_tmd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_tmd.cpp [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_vector.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_vector.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_vector.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_tmd.cpp: In member function 'void LAMMPS_NS::FixTMD::readfile(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_tmd.cpp:457:7: warning: 'imageflag' may be used uninitialized in this function [-Wmaybe-uninitialized] if (imageflag) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_vector.cpp: In constructor 'LAMMPS_NS::FixVector::FixVector(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_vector.cpp:149:26: warning: 'finalvalue' may be used uninitialized in this function [-Wmaybe-uninitialized] extarray = finalvalue; ^ [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_viscous.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_viscous.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_viscous.cpp [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall.cpp [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_harmonic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_harmonic.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall.cpp: In constructor 'LAMMPS_NS::FixWall::FixWall(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall.cpp:77:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized] wallwhich[nwall] = newwall; ^ [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_lj1043.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_lj1043.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_lj1043.cpp [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_lj126.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_lj126.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_lj126.cpp [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_lj93.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_lj93.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_lj93.cpp [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_reflect.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_reflect.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_reflect.cpp [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_region.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_region.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_region.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_reflect.cpp: In constructor 'LAMMPS_NS::FixWallReflect::FixWallReflect(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_reflect.cpp:68:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized] wallwhich[nwall] = newwall; ^ [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/force.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/force.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/force.cpp [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/group.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/group.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/group.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/group.cpp: In member function 'void LAMMPS_NS::Group::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/group.cpp:730:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&ngroup,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/group.cpp:742:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/group.cpp:746:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(names[i],sizeof(char),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/group.cpp: In member function 'void LAMMPS_NS::Group::assign(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/group.cpp:301:12: warning: 'category' may be used uninitialized in this function [-Wmaybe-uninitialized] else if (category == MOLECULE) tattribute = atom->molecule; ^ [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/image.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/image.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/image.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/image.cpp: In member function 'void LAMMPS_NS::Image::draw_cube(double*, double*, double)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/image.cpp:516:31: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] tdir[2] = camDir[2] * t; ^ [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance.cpp [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_group.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_group.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_group.cpp [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_neigh.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_neigh.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_neigh.cpp [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_store.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_store.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_store.cpp [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_time.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_time.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_time.cpp [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_var.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_var.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_var.cpp [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/improper.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/improper.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/improper.cpp [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_hybrid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_hybrid.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_hybrid.cpp: In member function 'virtual void LAMMPS_NS::ImproperHybrid::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_hybrid.cpp:320:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nstyles,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_hybrid.cpp:329:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_hybrid.cpp:332:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(keywords[m],sizeof(char),n,fp); ^ [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_zero.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_zero.cpp [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/info.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/info.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/info.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/info.cpp: In function 'void print_columns(FILE*, std::vector >&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/info.cpp:1123:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (int i = 0; i < styles.size(); ++i) { ^ [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/input.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/input.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/input.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/input.cpp: In member function 'void LAMMPS_NS::Input::partition()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/input.cpp:1161:3: warning: 'yesflag' may be used uninitialized in this function [-Wmaybe-uninitialized] if (yesflag) { ^ [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/integrate.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/integrate.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/integrate.cpp [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/irregular.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/irregular.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/irregular.cpp [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/kspace.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/kspace.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/kspace.cpp [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/lammps.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/lammps.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/lammps.cpp [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/lattice.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/lattice.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/lattice.cpp [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/library.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/library.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/library.cpp [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp: In function 'void MathExtra::no_squish_rotate(int, double*, double*, double*, double)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp:260:52: warning: 'kq[3]' may be used uninitialized in this function [-Wmaybe-uninitialized] phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp:260:39: warning: 'kq[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp:260:26: warning: 'kq[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp:260:13: warning: 'kq[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp:271:28: warning: 'kp[3]' may be used uninitialized in this function [-Wmaybe-uninitialized] p[3] = c_phi*p[3] + s_phi*kp[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp:270:28: warning: 'kp[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] p[2] = c_phi*p[2] + s_phi*kp[2]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp:269:28: warning: 'kp[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] p[1] = c_phi*p[1] + s_phi*kp[1]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp:268:28: warning: 'kp[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] p[0] = c_phi*p[0] + s_phi*kp[0]; ^ [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/math_special.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/math_special.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_special.cpp [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/memory.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/memory.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/memory.cpp [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/min.cpp [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_cg.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_cg.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/min_cg.cpp [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_fire.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_fire.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/min_fire.cpp [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_hftn.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_hftn.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/min_hftn.cpp [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_linesearch.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_linesearch.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/min_linesearch.cpp [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_quickmin.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_quickmin.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/min_quickmin.cpp [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_sd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_sd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/min_sd.cpp [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/minimize.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/minimize.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/minimize.cpp [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/molecule.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/molecule.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/molecule.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp: In member function 'int LAMMPS_NS::Modify::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1363:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nfix_restart_global,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1380:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1383:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(id_restart_global[i],sizeof(char),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1386:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1389:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(style_restart_global[i],sizeof(char),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1392:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1395:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(state_restart_global[i],sizeof(char),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1405:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nfix_restart_peratom,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1422:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1425:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(id_restart_peratom[i],sizeof(char),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1428:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1431:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(style_restart_peratom[i],sizeof(char),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1434:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nbin.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nbin.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nbin.cpp [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nbin_standard.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nbin_standard.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nbin_standard.cpp [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.cpp [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_request.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_request.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_request.cpp [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/neighbor.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/neighbor.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/neighbor.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/neighbor.cpp: In member function 'int LAMMPS_NS::Neighbor::choose_stencil(LAMMPS_NS::NeighRequest*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/neighbor.cpp:1674:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized] if (newtflag) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/neighbor.cpp: In member function 'int LAMMPS_NS::Neighbor::choose_pair(LAMMPS_NS::NeighRequest*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/neighbor.cpp:1782:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized] if (newtflag) { ^ [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair.cpp [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_copy.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_copy.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_copy.cpp [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin.cpp: In member function 'virtual void LAMMPS_NS::NPairFullBin::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin.cpp:104:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin.cpp:103:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin.cpp:103:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_atomonly.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_atomonly.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_atomonly.cpp [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_ghost.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_ghost.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairFullBinGhost::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_ghost.cpp:110:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_ghost.cpp:109:67: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_ghost.cpp:109:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_multi.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_multi.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_multi.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_multi.cpp: In member function 'virtual void LAMMPS_NS::NPairFullMulti::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_multi.cpp:111:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_multi.cpp:110:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_multi.cpp:110:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq.cpp: In member function 'virtual void LAMMPS_NS::NPairFullNsq::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq.cpp:105:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq.cpp:104:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq.cpp:104:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq.cpp:89:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized] if (includegroup && !(mask[j] & bitmask)) continue; ^ [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq_ghost.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq_ghost.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairFullNsqGhost::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq_ghost.cpp:104:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq_ghost.cpp:103:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq_ghost.cpp:103:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_atomonly_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_atomonly_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_atomonly_newton.cpp [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtoff::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff.cpp:108:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff.cpp:107:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff.cpp:107:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff_ghost.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff_ghost.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtoffGhost::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff_ghost.cpp:116:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff_ghost.cpp:115:67: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff_ghost.cpp:115:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewton::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton.cpp:140:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton.cpp:139:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton.cpp:139:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton_tri.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtonTri::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton_tri.cpp:114:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton_tri.cpp:113:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton_tri.cpp:113:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newtoff.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewtoff::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newtoff.cpp:115:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newtoff.cpp:114:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newtoff.cpp:114:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewton::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton.cpp:148:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton.cpp:147:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton.cpp:147:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton_tri.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewtonTri::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton_tri.cpp:123:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton_tri.cpp:122:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton_tri.cpp:122:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewtoff::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff.cpp:106:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff.cpp:105:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff.cpp:105:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff.cpp:90:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized] if (includegroup && !(mask[j] & bitmask)) continue; ^ [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff_ghost.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff_ghost.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewtoffGhost::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff_ghost.cpp:115:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff_ghost.cpp:114:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff_ghost.cpp:114:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff_ghost.cpp:127:39: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized] if (includegroup && !(mask[j] & bitmask)) continue; ^ [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newton.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewton::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newton.cpp:123:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newton.cpp:122:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newton.cpp:122:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newton.cpp:91:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized] if (includegroup && !(mask[j] & bitmask)) continue; ^ [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewtoff::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp:174:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp:132:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp:131:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp:131:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp:152:41: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] neighptr_middle[n_middle++] = j ^ (which << SBBITS); ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] errorflag = 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp:72:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewtonTri::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp:182:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp:140:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp:139:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp:139:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp:160:41: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] neighptr_middle[n_middle++] = j ^ (which << SBBITS); ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] errorflag = 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp:72:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewton::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:220:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:178:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:177:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:177:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:153:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] neighptr_middle[n_middle++] = j ^ (which << SBBITS); ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] index += n; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:71:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:220:45: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:221:36: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] numneigh_middle[i] = n_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:219:29: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] ilist_middle[inum] = i; ^ [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaNsqNewtoff::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp:169:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp:130:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp:129:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp:129:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp:148:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] neighptr_middle[n_middle++] = j ^ (which << SBBITS); ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] errorflag = 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp:76:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp:114:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized] if (includegroup && !(mask[j] & bitmask)) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaNsqNewton::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp:189:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp:149:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp:148:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp:148:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp:168:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] neighptr_middle[n_middle++] = j ^ (which << SBBITS); ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] errorflag = 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp:78:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp:117:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized] if (includegroup && !(mask[j] & bitmask)) continue; ^ [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_bin_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_bin_newtoff.cpp [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_bin_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_bin_newton.cpp [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_bin_newton_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_bin_newton_tri.cpp [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newtoff.cpp [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newton.cpp.o /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeNsqNewtoff::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newtoff.cpp:79:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized] if (includegroup && !(mask[j] & bitmask)) continue; ^ /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newton.cpp [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_halffull_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_halffull_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_halffull_newtoff.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeNsqNewton::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newton.cpp:82:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized] if (includegroup && !(mask[j] & bitmask)) continue; ^ [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_halffull_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_halffull_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_halffull_newton.cpp [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip.cpp [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_respa.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_respa.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_respa.cpp [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_size.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_size.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_size.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_respa.cpp: In member function 'virtual void LAMMPS_NS::NPairSkipRespa::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_respa.cpp:152:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_respa.cpp:153:36: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] numneigh_middle[i] = n_middle; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_respa.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:223:67: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] if (posix_memalign(&ptr, LAMMPS_MEMALIGN, pagesize*sizeof(T))) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_respa.cpp:64:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_size_off2on.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_size_off2on.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_size_off2on.cpp [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_size_off2on_oneside.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_size_off2on_oneside.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_size_off2on_oneside.cpp [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_bin_2d.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_bin_2d.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_bin_2d.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_bin_3d.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_bin_3d.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_bin_3d.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_ghost_bin_2d.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_ghost_bin_2d.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_ghost_bin_2d.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_ghost_bin_3d.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_ghost_bin_3d.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_ghost_bin_3d.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_multi_2d.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_multi_2d.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_multi_2d.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_multi_3d.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_multi_3d.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_multi_3d.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_2d_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_2d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_2d_newtoff.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_2d_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_2d_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_2d_newton.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_2d_newton_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_2d_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_2d_newton_tri.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_3d_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_3d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_3d_newtoff.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_3d_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_3d_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_3d_newton.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_3d_newton_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_3d_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_3d_newton_tri.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_ghost_bin_2d_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_ghost_bin_2d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_ghost_bin_2d_newtoff.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_ghost_bin_3d_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_ghost_bin_3d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_ghost_bin_3d_newtoff.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_2d_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_2d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_2d_newtoff.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_2d_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_2d_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_2d_newton.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_2d_newton_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_2d_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_2d_newton_tri.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_3d_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_3d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_3d_newtoff.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_3d_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_3d_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_3d_newton.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_3d_newton_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_3d_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_3d_newton_tri.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_angle_all.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_angle_all.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_angle_all.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_angle_partial.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_angle_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_angle_partial.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_angle_template.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_angle_template.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_angle_template.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_bond_all.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_bond_all.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_bond_all.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_bond_partial.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_bond_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_bond_partial.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_bond_template.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_bond_template.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_bond_template.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_dihedral_all.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_dihedral_all.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_dihedral_all.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_dihedral_partial.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_dihedral_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_dihedral_partial.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_dihedral_template.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_dihedral_template.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_dihedral_template.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_improper_all.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_improper_all.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_improper_all.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_improper_partial.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_improper_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_improper_partial.cpp [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_improper_template.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_improper_template.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_improper_template.cpp [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/output.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/output.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/output.cpp [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp: In member function 'void LAMMPS_NS::Pair::write_file(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp:1672:5: warning: 'rsq' may be used uninitialized in this function [-Wmaybe-uninitialized] if (rsq < cutsq[itype][jtype]) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp:1683:32: warning: 'q_hold' may be used uninitialized in this function [-Wmaybe-uninitialized] if (atom->q) atom->q = q_hold; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp: In member function 'virtual void LAMMPS_NS::Pair::init_tables(double, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp:408:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized] if (msmflag) ftable[i] = qqrd2e/r * fgamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp:395:30: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] etable[i] = qqrd2e/r * egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp:399:30: warning: 'derfc' may be used uninitialized in this function [-Wmaybe-uninitialized] etable[i] = qqrd2e/r * derfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp:409:61: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized] else ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp:409:56: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized] else ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2); ^ [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp.o [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp: In member function 'virtual void LAMMPS_NS::PairBeck::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp:282:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp:286:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&AA[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp:287:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&BB[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp:288:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aa[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp:289:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp:290:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&beta[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp:291:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp: In member function 'virtual void LAMMPS_NS::PairBeck::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp:321:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp:322:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp: In member function 'virtual void LAMMPS_NS::PairBorn::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:334:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:338:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:339:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&rho[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:340:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:341:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&c[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:342:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&d[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:343:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp: In member function 'virtual void LAMMPS_NS::PairBorn::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:374:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:375:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:376:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:377:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:366:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:370:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:371:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&rho[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:372:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:373:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&c[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:374:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&d[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:375:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:407:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:408:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:409:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:410:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:411:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:365:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:369:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:370:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&rho[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:371:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:372:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&c[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:373:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&d[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:374:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:406:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alf,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:407:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:408:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:409:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:410:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulWolf::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:487:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:488:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:482:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor * (erfcc-e_shift*r); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:483:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:482:41: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor * (erfcc-e_shift*r); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:171:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:168:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:172:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] d[itype][jtype]*r6inv*r2inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:168:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:164:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:165:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:169:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] d[itype][jtype]*r6inv*r2inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:164:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulDSF::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:489:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:490:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:484:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:485:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:484:37: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp: In member function 'virtual void LAMMPS_NS::PairBuck::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp:312:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp:316:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp:317:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&rho[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp:318:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&c[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp:319:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp: In member function 'virtual void LAMMPS_NS::PairBuck::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp:348:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp:349:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp:350:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp:351:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:366:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:370:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:371:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&rho[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:372:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&c[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:373:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:374:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:405:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:406:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:407:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:408:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:409:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulCut::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:467:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:467:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:146:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:146:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_debye.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_debye.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp:249:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp:252:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp:276:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp:277:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp:278:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDebye::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_debye.cpp:153:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_debye.cpp:154:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&kappa,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_debye.cpp:155:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_debye.cpp:156:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_streitz.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_streitz.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_streitz.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDSF::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp:257:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDSF::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp:281:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp:282:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp:283:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp:284:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulWolf::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp:254:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulWolf::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp:278:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alf,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp:279:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp:280:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp:281:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp: In member function 'virtual double LAMMPS_NS::PairCoulWolf::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp:318:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor * (erfcc-e_shift*r); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp:319:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp:318:41: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor * (erfcc-e_shift*r); ^ [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp: In member function 'virtual void LAMMPS_NS::PairDPD::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp:319:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp:323:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a0[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp:324:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&gamma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp:325:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp: In member function 'virtual void LAMMPS_NS::PairDPD::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp:353:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&temperature,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp:354:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp:355:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&seed,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp:356:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp: In member function 'virtual void LAMMPS_NS::PairDPDTstat::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp:234:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp:238:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&gamma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp:239:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp: In member function 'virtual void LAMMPS_NS::PairDPDTstat::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp:267:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&t_start,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp:268:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&t_stop,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp:269:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp:270:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&seed,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp:271:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp: In member function 'virtual void LAMMPS_NS::PairGauss::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp:285:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp:289:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp:290:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&b[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp:291:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp: In member function 'virtual void LAMMPS_NS::PairGauss::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp:318:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp:319:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp:320:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp:668:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nstyles,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp:685:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp:688:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(keywords[m],sizeof(char),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp:694:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp:698:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(special_lj[m],sizeof(double),4,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp:701:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp:705:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(special_coul[m],sizeof(double),4,fp); ^ [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid_overlay.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid_overlay.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid_overlay.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::coeff(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp:393:7: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized] int multflag; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid_overlay.cpp: In member function 'virtual void LAMMPS_NS::PairHybridOverlay::coeff(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid_overlay.cpp:47:7: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized] int multflag; ^ [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:612:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:616:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:617:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:618:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:647:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:648:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:649:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:650:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:283:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:287:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:288:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:289:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:290:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:317:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::compute_outer(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:394:44: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair = factor_lj*forcelj*r2inv; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:398:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl,0.0,fpair,delx,dely,delz); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp: In member function 'virtual double LAMMPS_NS::PairLJCubic::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:349:32: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] (PHIS + DPHIDS*t - A3*t*t*t/6.0); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:346:66: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:134:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] (PHIS + DPHIDS*t - A3*t*t*t/6.0); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:131:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]); ^ [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:606:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:610:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:611:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:612:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:641:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:642:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:643:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:644:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:357:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:361:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:362:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:363:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:364:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:394:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:395:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:396:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:397:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:398:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulCut::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:453:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:140:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::compute_outer(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:388:44: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair = factor_lj*forcelj*r2inv; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:392:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl,0.0,fpair,delx,dely,delz); ^ [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDebye::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:174:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:175:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:176:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&kappa,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:177:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:178:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:380:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:384:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:385:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:386:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:416:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:417:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:418:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:419:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:420:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:421:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulDebye::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:216:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:212:71: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:212:53: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDebye::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:110:72: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:110:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:113:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:168:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:169:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:162:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:168:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulDSF::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:465:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:465:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:465:37: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:459:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:375:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:379:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:380:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:381:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:412:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alf,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:413:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:414:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:415:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:416:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:417:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:172:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:165:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpand::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp:328:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp:332:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp:333:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp:334:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&shift[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp:335:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpand::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp:364:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp:365:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp:366:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp:367:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:345:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:349:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:350:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:351:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:352:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:382:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:383:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:384:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:385:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp: In member function 'virtual double LAMMPS_NS::PairLJGromacs::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:439:65: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] phiswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:141:71: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:383:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:387:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:388:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:417:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_inner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:418:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:419:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul_inner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:420:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:421:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:422:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual double LAMMPS_NS::PairLJGromacsCoulGromacs::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:504:51: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized] (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:500:66: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:493:38: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized] tc*tc*tc * (coulsw3 + coulsw4*tc); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:160:58: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoulswitch = tc*tc*tc * (coulsw3 + coulsw4*tc); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:170:59: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized] (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:166:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:166:46: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]); ^ [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:356:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:360:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:361:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:362:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:363:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:393:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:394:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:395:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:396:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp: In member function 'virtual double LAMMPS_NS::PairLJSmooth::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:454:30: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized] ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:453:60: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] ljsw2[itype][jtype]*tsq/2.0 - ljsw3[itype][jtype]*tsq*t/3.0 - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:449:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:144:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized] ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:143:68: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] ljsw2[itype][jtype]*tsq/2.0 - ljsw3[itype][jtype]*tsq*t/3.0 - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:139:27: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmoothLinear::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp:287:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp:291:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp:292:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp:293:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmoothLinear::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp:320:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp:321:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:633:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:637:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:638:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:639:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&gamR[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:640:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&gamA[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:641:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:672:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:673:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:674:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:675:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp: In member function 'virtual void LAMMPS_NS::PairMorse::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp:269:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp:273:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&d0[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp:274:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp:275:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp:276:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp: In member function 'virtual void LAMMPS_NS::PairMorse::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp:304:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp:305:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp:306:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::compute_outer(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:396:46: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair = factor_mie*forcemie*r2inv; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:400:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl,0.0,fpair,delx,dely,delz); ^ [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp:250:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp:254:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&prefactor[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp:255:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp:280:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp:281:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp: In member function 'void LAMMPS_NS::PairTable::read_table(LAMMPS_NS::PairTable::Table*, char*, char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:378:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); // no match, skip section ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:380:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:381:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:387:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:415:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp: In member function 'virtual void LAMMPS_NS::PairTable::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:977:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabstyle,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:978:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tablength,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:979:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ewaldflag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:980:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&pppmflag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:981:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&msmflag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:982:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&dispersionflag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:983:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tip4pflag,sizeof(int),1,fp); ^ [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp: In member function 'virtual double LAMMPS_NS::PairTable::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:1042:41: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized] ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:1042:14: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized] ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:1039:35: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] phi = tb->e[itable] + fraction*tb->de[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp: In member function 'virtual void LAMMPS_NS::PairTable::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:177:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized] ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:177:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized] ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:174:45: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = tb->e[itable] + fraction*tb->de[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp: In member function 'virtual void LAMMPS_NS::PairUFM::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp:290:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp:294:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp:295:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp:296:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp: In member function 'virtual void LAMMPS_NS::PairUFM::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp:324:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp:325:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp:326:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zbl.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zbl.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp: In member function 'virtual void LAMMPS_NS::PairYukawa::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp:256:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp:260:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp:261:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp: In member function 'virtual void LAMMPS_NS::PairYukawa::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp:288:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&kappa,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp:289:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp:290:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp:291:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zero.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zero.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zbl.cpp: In member function 'virtual void LAMMPS_NS::PairZBL::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zbl.cpp:142:53: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] (sw3[itype][jtype] + sw4[itype][jtype]*t); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zbl.cpp: In member function 'virtual double LAMMPS_NS::PairZBL::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zbl.cpp:290:45: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] (sw3[itype][jtype] + sw4[itype][jtype]*t); ^ [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/procmap.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/procmap.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/procmap.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zero.cpp: In member function 'virtual void LAMMPS_NS::PairZero::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zero.cpp:176:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zero.cpp:180:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zero.cpp: In member function 'virtual void LAMMPS_NS::PairZero::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zero.cpp:205:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zero.cpp:206:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&coeffflag,sizeof(int),1,fp); ^ [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/python.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/python.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/python.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/procmap.cpp: In member function 'void LAMMPS_NS::ProcMap::output(char*, int*, int***)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/procmap.cpp:687:16: warning: 'kme' may be used uninitialized in this function [-Wmaybe-uninitialized] vec[5] = kme + 1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/procmap.cpp:686:16: warning: 'jme' may be used uninitialized in this function [-Wmaybe-uninitialized] vec[4] = jme + 1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/procmap.cpp:685:16: warning: 'ime' may be used uninitialized in this function [-Wmaybe-uninitialized] vec[3] = ime + 1; ^ [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/random_mars.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/random_mars.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/random_mars.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/procmap.cpp: In member function 'int LAMMPS_NS::ProcMap::best_factors(int, int**, int*, int, int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/procmap.cpp:881:10: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized] return index; ^ [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/random_park.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/random_park.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/random_park.cpp [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/rcb.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/rcb.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/rcb.cpp [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/read_data.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/read_data.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_data.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/rcb.cpp: In member function 'void LAMMPS_NS::RCB::compute(int, int, double**, double*, double*, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/rcb.cpp:559:73: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized] if (readnumber == 2) MPI_Send(NULL,0,MPI_INT,procpartner2,0,world); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/rcb.cpp:487:29: warning: 'valuehalf_select' may be used uninitialized in this function [-Wmaybe-uninitialized] else lo[dim] = valuehalf; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_data.cpp: In member function 'void LAMMPS_NS::ReadData::parse_keyword(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_data.cpp:1966:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if ((blank == strlen(line)) || (line[blank] == '#')) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/rcb.cpp: In member function 'void LAMMPS_NS::RCB::compute_old(int, int, double**, double*, double*, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/rcb.cpp:1051:73: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized] if (readnumber == 2) MPI_Send(NULL,0,MPI_INT,procpartner2,0,world); ^ [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/read_dump.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/read_dump.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_dump.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_dump.cpp: In member function 'LAMMPS_NS::bigint LAMMPS_NS::ReadDump::seek(LAMMPS_NS::bigint, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_dump.cpp:229:10: warning: 'ntimestep' may be used uninitialized in this function [-Wmaybe-uninitialized] bigint ntimestep; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_dump.cpp: In member function 'LAMMPS_NS::bigint LAMMPS_NS::ReadDump::next(LAMMPS_NS::bigint, LAMMPS_NS::bigint, int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_dump.cpp:299:5: warning: 'eofflag' may be used uninitialized in this function [-Wmaybe-uninitialized] if (eofflag) ntimestep = -1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_dump.cpp:271:10: warning: 'ntimestep' may be used uninitialized in this function [-Wmaybe-uninitialized] bigint ntimestep; ^ [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/reader.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/reader.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/reader.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::file_search(char*, char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:630:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if (strlen(&ep->d_name[nbegin]) < n) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::command(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:304:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:308:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&procsperfile,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:311:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:315:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:321:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(buf,sizeof(double),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:381:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:384:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&procsperfile,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:393:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:397:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:403:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(buf,sizeof(double),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::file_layout()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:1087:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(all_written_send_sizes,sizeof(int),nprocs_file,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp: In member function 'char* LAMMPS_NS::ReadRestart::read_string()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:1269:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(value,sizeof(char),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::read_int_vec(int, int*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:1281:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(vec,sizeof(int),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::read_double_vec(int, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:1292:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(vec,sizeof(double),n,fp); ^ [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/reader_native.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/reader_native.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/reader_native.cpp [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/reader_xyz.cpp.o [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/reader_xyz.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/reader_xyz.cpp /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/region.cpp [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_block.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_block.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_block.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/region.cpp: In member function 'int LAMMPS_NS::Region::surface(double, double, double, double)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/region.cpp:192:34: warning: 'xorig[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] contact[i].delz = xorig[2] - zs; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/region.cpp:191:34: warning: 'xorig[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] contact[i].dely = xorig[1] - ys; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/region.cpp:190:34: warning: 'xorig[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] contact[i].delx = xorig[0] - xs; ^ [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cone.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cone.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cone.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_block.cpp: In member function 'virtual int LAMMPS_NS::RegBlock::surface_exterior(double*, double)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_block.cpp:336:28: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized] add_contact(0,x,xp,yp,zp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_block.cpp:336:28: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_block.cpp:336:28: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cylinder.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cylinder.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cylinder.cpp [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_intersect.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_intersect.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_intersect.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cylinder.cpp: In member function 'virtual int LAMMPS_NS::RegCylinder::surface_exterior(double*, double)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cylinder.cpp:655:30: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized] add_contact(0,x,xp,yp,zp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cylinder.cpp:655:30: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cylinder.cpp:655:30: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_plane.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_plane.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_plane.cpp [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_prism.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_prism.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_prism.cpp [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_sphere.cpp [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_union.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_union.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_union.cpp [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/replicate.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/replicate.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/replicate.cpp [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/rerun.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/rerun.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/rerun.cpp [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/reset_ids.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/reset_ids.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/reset_ids.cpp [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/respa.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/respa.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/respa.cpp [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/run.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/run.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/run.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/run.cpp: In member function 'void LAMMPS_NS::Run::command(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/run.cpp:173:41: warning: 'stop' may be used uninitialized in this function [-Wmaybe-uninitialized] if (stopflag) update->endstep = stop; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/run.cpp:171:45: warning: 'start' may be used uninitialized in this function [-Wmaybe-uninitialized] if (startflag) update->beginstep = start; ^ [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/set.cpp.o [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/special.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/set.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/set.cpp /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/special.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/special.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/set.cpp: In member function 'void LAMMPS_NS::Set::set(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/set.cpp:909:35: warning: 'quat' may be used uninitialized in this function [-Wmaybe-uninitialized] quat[1] = xvalue * sintheta2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/set.cpp: In member function 'void LAMMPS_NS::Set::setrandom(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/set.cpp:1137:24: warning: 'quat' may be used uninitialized in this function [-Wmaybe-uninitialized] quat[1] = 0.0; ^ [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/thermo.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/thermo.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/thermo.cpp [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/timer.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/timer.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/timer.cpp [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/universe.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/universe.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/universe.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/universe.cpp: In member function 'void LAMMPS_NS::Universe::add_world(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/universe.cpp:190:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] } else if (strlen(str) == len-1) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/universe.cpp: In member function 'void LAMMPS_NS::Universe::reorder(char*, char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/universe.cpp:149:38: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] MPI_Comm_split(uorig,0,key,&uworld); ^ [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/update.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/update.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/update.cpp [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::special_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:3962:16: warning: unused variable 'xvalue' [-Wunused-variable] double value,xvalue,sy,sxy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::next(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:681:33: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(fp,"%d",&nextindex); ^ [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::group_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:3926:39: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized] } else argstack[nargstack++] = value; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp: In member function 'double LAMMPS_NS::Variable::evaluate_boolean(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:4688:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized] int op,opprevious,flag1,flag2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp: In member function 'void LAMMPS_NS::Velocity::set(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:547:63: warning: 'zvar' may be used uninitialized in this function [-Wmaybe-uninitialized] else input->variable->compute_atom(zvar,igroup,NULL,3,0); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:542:63: warning: 'yvar' may be used uninitialized in this function [-Wmaybe-uninitialized] else input->variable->compute_atom(yvar,igroup,NULL,3,0); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:537:63: warning: 'xvar' may be used uninitialized in this function [-Wmaybe-uninitialized] else input->variable->compute_atom(xvar,igroup,NULL,3,0); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:460:17: warning: 'vz' may be used uninitialized in this function [-Wmaybe-uninitialized] vz *= zscale; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:456:17: warning: 'vy' may be used uninitialized in this function [-Wmaybe-uninitialized] vy *= yscale; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:452:17: warning: 'vx' may be used uninitialized in this function [-Wmaybe-uninitialized] vx *= xscale; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp: In member function 'void LAMMPS_NS::Velocity::ramp(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:650:3: warning: 'v_dim' may be used uninitialized in this function [-Wmaybe-uninitialized] if (v_dim == 2 && domain->dimension == 2) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:672:3: warning: 'coord_dim' may be used uninitialized in this function [-Wmaybe-uninitialized] if (coord_dim == 0) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::special_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:4000:20: warning: 'nstride' may be used uninitialized in this function [-Wmaybe-uninitialized] int index,nvec,nstride; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:4143:7: warning: 'nvec' may be used uninitialized in this function [-Wmaybe-uninitialized] for (int i = 0; i < nvec; i++) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:4188:5: warning: 'method' may be used uninitialized in this function [-Wmaybe-uninitialized] if (method == SLOPE) { ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:34:0: /builddir/build/BUILD/lammps-stable_22Aug2018/src/memory.h: In member function 'void LAMMPS_NS::Velocity::create(double, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/memory.h:172:5: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized] sfree(array[0]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:168:12: note: 'vhold' was declared here double **vhold; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp: In member function 'double LAMMPS_NS::Variable::evaluate(char*, LAMMPS_NS::Variable::Tree**, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:1180:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized] int op,opprevious; ^ [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/verlet.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/verlet.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/verlet.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp: In member function 'void LAMMPS_NS::Variable::compute_atom(int, int, double*, int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:1011:54: warning: 'vstore' may be used uninitialized in this function [-Wmaybe-uninitialized] if (mask[i] & groupbit) result[m] += vstore[i]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::math_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:3678:37: warning: 'value2' may be used uninitialized in this function [-Wmaybe-uninitialized] double value = value1 + value2*(1.0-cos(omega*delta*update->dt)); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:3672:38: warning: 'newtree' may be used uninitialized in this function [-Wmaybe-uninitialized] if (tree) newtree->type = CWIGGLE; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:3375:42: warning: 'value1' may be used uninitialized in this function [-Wmaybe-uninitialized] argstack[nargstack++] = sqrt(value1); ^ [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/write_coeff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/write_coeff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_coeff.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp: In member function 'void LAMMPS_NS::Variable::set(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:185:9: warning: 'nfirst' may be used uninitialized in this function [-Wmaybe-uninitialized] int nfirst,nlast; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:206:22: warning: 'nlast' may be used uninitialized in this function [-Wmaybe-uninitialized] num[nvar] = nlast; ^ [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/write_data.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/write_data.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_data.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_coeff.cpp: In member function 'void LAMMPS_NS::WriteCoeff::command(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_coeff.cpp:97:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(str,256,one); // coeff ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_coeff.cpp:101:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(str,256,one); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_coeff.cpp:104:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(str,256,one); ^ [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/write_dump.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/write_dump.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_dump.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_dump.cpp: In member function 'void LAMMPS_NS::WriteDump::command(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_dump.cpp:84:16: warning: 'dump' may be used uninitialized in this function [-Wmaybe-uninitialized] dump->write(); ^ [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/write_restart.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/write_restart.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_restart.cpp [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_erotate_asphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_erotate_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_erotate_asphere.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_erotate_asphere.cpp: In member function 'virtual double LAMMPS_NS::ComputeERotateAsphere::compute_scalar()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_erotate_asphere.cpp:139:35: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertia[0] = tbonus[tri[i]].inertia[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_erotate_asphere.cpp:130:32: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] length = lbonus[line[i]].length; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_erotate_asphere.cpp:109:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_temp_asphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_temp_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_temp_asphere.cpp [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nh_asphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nh_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nh_asphere.cpp [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nph_asphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nph_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nph_asphere.cpp [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_npt_asphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_npt_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_npt_asphere.cpp [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_asphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_asphere.cpp [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_asphere_noforce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_asphere_noforce.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_asphere_noforce.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_asphere_noforce.cpp: In member function 'virtual void LAMMPS_NS::FixNVEAsphereNoforce::initial_integrate(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_asphere_noforce.cpp:94:33: warning: 'bonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = bonus[ellipsoid[i]].shape; ^ [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_line.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_line.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_line.cpp [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_tri.cpp [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nvt_asphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nvt_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nvt_asphere.cpp [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:467:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setwell[i],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:470:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&well[i][0],sizeof(double),3,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:474:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:478:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:479:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:480:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:512:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&gamma,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:513:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&upsilon,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:514:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mu,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:515:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:516:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:517:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_line_lj.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_line_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_line_lj.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp: In member function 'double LAMMPS_NS::PairGayBerne::gayberne_analytic(int, int, double (*)[3], double (*)[3], double (*)[3], double (*)[3], double (*)[3], double (*)[3], double*, double, double*, double*, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:730:36: warning: 'deta2[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:729:36: warning: 'deta2[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:728:36: warning: 'deta2[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:730:21: warning: 'dchi2[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:729:21: warning: 'dchi2[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:728:21: warning: 'dchi2[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:730:51: warning: '*((void*)& dUr2 +16)' may be used uninitialized in this function [-Wmaybe-uninitialized] rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:729:51: warning: '*((void*)& dUr2 +8)' may be used uninitialized in this function [-Wmaybe-uninitialized] rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:728:51: warning: 'dUr2' may be used uninitialized in this function [-Wmaybe-uninitialized] rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:220:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized] if (eflag) evdwl = factor_lj*one_eng; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_line_lj.cpp: In member function 'virtual void LAMMPS_NS::PairLineLJ::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_line_lj.cpp:308:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl,0.0,fpair,delx,dely,delz); ^ [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_tri_lj.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_tri_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_tri_lj.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp:445:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setwell[i],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp:448:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&well[i][0],sizeof(double),3,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp:452:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp:456:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp:457:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp:458:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp:486:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp:487:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_tri_lj.cpp: In member function 'virtual void LAMMPS_NS::PairTriLJ::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_tri_lj.cpp:382:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl,0.0,fpair,delx,dely,delz); ^ [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_nparticle.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_nparticle.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_nparticle.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp:195:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized] if (eflag) evdwl = factor_lj*one_eng; ^ [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polygon.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polygon.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polygon.cpp [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp: In member function 'int LAMMPS_NS::BodyRoundedPolyhedron::nedges(LAMMPS_NS::AtomVecBody::Bonus*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp:99:7: warning: unused variable 'nfaces' [-Wunused-variable] int nfaces = bonus->ivalue[2]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp: In member function 'virtual int LAMMPS_NS::BodyRoundedPolyhedron::image(int, double, double, int*&, double**&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp:491:9: warning: unused variable 'nfaces' [-Wunused-variable] int nfaces = bonus->ivalue[2]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp:466:7: warning: unused variable 'j' [-Wunused-variable] int j, nelements; ^ [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/compute_body_local.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/compute_body_local.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/compute_body_local.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::BodyRoundedPolyhedron::data_body(int, int, int, int*, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp:213:7: warning: 'nedges' may be used uninitialized in this function [-Wmaybe-uninitialized] int nedges,nentries; ^ [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/compute_temp_body.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/compute_temp_body.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/compute_temp_body.cpp [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nh_body.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nh_body.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nh_body.cpp [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nph_body.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nph_body.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nph_body.cpp [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_npt_body.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_npt_body.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_npt_body.cpp [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nve_body.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nve_body.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nve_body.cpp [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nvt_body.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nvt_body.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nvt_body.cpp [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp: In member function 'virtual void LAMMPS_NS::FixWallBodyPolygon::post_force(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:313:14: warning: unused variable 'r' [-Wunused-variable] double r = sqrt(rsq); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:314:14: warning: unused variable 'rsqinv' [-Wunused-variable] double rsqinv = 1.0 / rsq; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:338:11: warning: variable 'interact' set but not used [-Wunused-but-set-variable] int interact, num_contacts, done; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:209:59: warning: variable 'rradi' set but not used [-Wunused-but-set-variable] double vwall[3],dx,dy,dz,del1,del2,delxy,delr,rsq,eradi,rradi,wall_pos; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp: In member function 'int LAMMPS_NS::FixWallBodyPolygon::vertex_against_wall(int, double, double**, double**, double**, int, LAMMPS_NS::FixWallBodyPolygon::Contact*, int&, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:502:24: warning: unused variable 'p2vertex' [-Wunused-variable] int mode, contact, p2vertex; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:503:25: warning: unused variable 't' [-Wunused-variable] double d, R, hi[3], t, delx, dely, delz, fpair, shift; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:503:53: warning: unused variable 'shift' [-Wunused-variable] double d, R, hi[3], t, delx, dely, delz, fpair, shift; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:504:12: warning: unused variable 'xj' [-Wunused-variable] double xj[3], rij; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:481:18: warning: unused variable 'xpj' [-Wunused-variable] double xpi[3], xpj[3], dist, eradi, rradi; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:481:26: warning: unused variable 'dist' [-Wunused-variable] double xpi[3], xpj[3], dist, eradi, rradi; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:481:32: warning: variable 'eradi' set but not used [-Wunused-but-set-variable] double xpi[3], xpj[3], dist, eradi, rradi; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:482:22: warning: unused variable 'rx' [-Wunused-variable] double fx, fy, fz, rx, ry, rz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:482:26: warning: unused variable 'ry' [-Wunused-variable] double fx, fy, fz, rx, ry, rz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:482:30: warning: unused variable 'rz' [-Wunused-variable] double fx, fy, fz, rx, ry, rz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:483:7: warning: unused variable 'nlocal' [-Wunused-variable] int nlocal = atom->nlocal; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp: In member function 'void LAMMPS_NS::FixWallBodyPolygon::contact_forces(LAMMPS_NS::FixWallBodyPolygon::Contact&, double, double**, double**, double**, double**, double**, double*, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:674:28: warning: unused variable 'jefirst' [-Wunused-variable] int ibody,ibonus,ifirst, jefirst, ni; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::FixWallBodyPolyhedron::post_force(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:328:14: warning: unused variable 'r' [-Wunused-variable] double r = sqrt(rsq); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:329:14: warning: unused variable 'rsqinv' [-Wunused-variable] double rsqinv = 1.0 / rsq; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:362:11: warning: variable 'interact' set but not used [-Wunused-but-set-variable] int interact, num_contacts, done; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:362:35: warning: unused variable 'done' [-Wunused-variable] int interact, num_contacts, done; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:363:14: warning: unused variable 'delta_a' [-Wunused-variable] double delta_a, delta_ua, j_a; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:363:23: warning: unused variable 'delta_ua' [-Wunused-variable] double delta_a, delta_ua, j_a; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:363:33: warning: unused variable 'j_a' [-Wunused-variable] double delta_a, delta_ua, j_a; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:216:38: warning: unused variable 'delxy' [-Wunused-variable] double vwall[3],dx,dy,dz,del1,del2,delxy,delr,rsq,eradi,rradi,wall_pos; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:216:44: warning: unused variable 'delr' [-Wunused-variable] double vwall[3],dx,dy,dz,del1,del2,delxy,delr,rsq,eradi,rradi,wall_pos; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:216:53: warning: variable 'eradi' set but not used [-Wunused-but-set-variable] double vwall[3],dx,dy,dz,del1,del2,delxy,delr,rsq,eradi,rradi,wall_pos; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:216:59: warning: variable 'rradi' set but not used [-Wunused-but-set-variable] double vwall[3],dx,dy,dz,del1,del2,delxy,delr,rsq,eradi,rradi,wall_pos; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:217:35: warning: variable 'nfi' set but not used [-Wunused-but-set-variable] int i,ni,npi,ifirst,nei,iefirst,nfi,iffirst,side; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:217:39: warning: variable 'iffirst' set but not used [-Wunused-but-set-variable] int i,ni,npi,ifirst,nei,iefirst,nfi,iffirst,side; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp: In member function 'int LAMMPS_NS::FixWallBodyPolyhedron::edge_against_wall(int, double, int, double*, double**, double**, double**, LAMMPS_NS::FixWallBodyPolyhedron::Contact*, int&, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:551:16: warning: variable 'mode' set but not used [-Wunused-but-set-variable] int ni, nei, mode, contact; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:553:7: warning: unused variable 'nlocal' [-Wunused-variable] int nlocal = atom->nlocal; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp: In member function 'void LAMMPS_NS::FixWallBodyPolyhedron::contact_forces(int, double, double*, double*, double, double, double, double, double, double, double**, double**, double**, double**, double**, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:705:14: warning: unused variable 'jbonus' [-Wunused-variable] int ibonus,jbonus; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:708:28: warning: unused variable 'vj' [-Wunused-variable] double fn[3],ft[3],vi[3],vj[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp: In member function 'void LAMMPS_NS::FixWallBodyPolyhedron::contact_forces(LAMMPS_NS::FixWallBodyPolyhedron::Contact&, double, double**, double**, double**, double**, double**, double*, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:790:28: warning: unused variable 'jefirst' [-Wunused-variable] int ibody,ibonus,ifirst, jefirst, ni; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp: In member function 'virtual void LAMMPS_NS::FixWallBodyPolygon::post_force(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:345:71: warning: 'wall_pos' may be used uninitialized in this function [-Wmaybe-uninitialized] contact_list, num_contacts, facc); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:303:9: warning: 'eradi' may be used uninitialized in this function [-Wmaybe-uninitialized] if (delr > eradi) dz = cylradius; ^ [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_nparticle.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_nparticle.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_nparticle.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::FixWallBodyPolyhedron::post_force(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:342:79: warning: 'wall_pos' may be used uninitialized in this function [-Wmaybe-uninitialized] sphere_against_wall(i, wall_pos, side, vwall, x, v, f, angmom, torque); ^ [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_nparticle.cpp: In member function 'virtual void LAMMPS_NS::PairBodyNparticle::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_nparticle.cpp:328:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl,0.0,fpair,delx,dely,delz); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolygon::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:247:11: warning: variable 'interact' set but not used [-Wunused-but-set-variable] int interact, num_contacts, done; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:108:46: warning: unused variable 'fx' [-Wunused-variable] double xtmp,ytmp,ztmp,delx,dely,delz,evdwl,fx,fy,fz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:108:49: warning: unused variable 'fy' [-Wunused-variable] double xtmp,ytmp,ztmp,delx,dely,delz,evdwl,fx,fy,fz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:108:52: warning: unused variable 'fz' [-Wunused-variable] double xtmp,ytmp,ztmp,delx,dely,delz,evdwl,fx,fy,fz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:109:14: warning: variable 'rsqinv' set but not used [-Wunused-but-set-variable] double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:109:33: warning: variable 'eradi' set but not used [-Wunused-but-set-variable] double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:109:39: warning: variable 'eradj' set but not used [-Wunused-but-set-variable] double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:109:45: warning: variable 'rradi' set but not used [-Wunused-but-set-variable] double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:109:51: warning: variable 'rradj' set but not used [-Wunused-but-set-variable] double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:110:10: warning: unused variable 'xi' [-Wunused-variable] double xi[3],xj[3],fi[3],fj[3],ti[3],tj[3],facc[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:110:16: warning: unused variable 'xj' [-Wunused-variable] double xi[3],xj[3],fi[3],fj[3],ti[3],tj[3],facc[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:110:22: warning: unused variable 'fi' [-Wunused-variable] double xi[3],xj[3],fi[3],fj[3],ti[3],tj[3],facc[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:110:28: warning: unused variable 'fj' [-Wunused-variable] double xi[3],xj[3],fi[3],fj[3],ti[3],tj[3],facc[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:110:34: warning: unused variable 'ti' [-Wunused-variable] double xi[3],xj[3],fi[3],fj[3],ti[3],tj[3],facc[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:110:40: warning: unused variable 'tj' [-Wunused-variable] double xi[3],xj[3],fi[3],fj[3],ti[3],tj[3],facc[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:111:11: warning: unused variable 'dxi' [-Wunused-variable] double *dxi,*dxj; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:111:16: warning: unused variable 'dxj' [-Wunused-variable] double *dxi,*dxj; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolygon::sphere_against_sphere(int, int, double, double, double, double, double, double, double**, double**, double**, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:604:10: warning: variable 'eradi' set but not used [-Wunused-but-set-variable] double eradi,eradj,rradi,rradj; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:604:16: warning: variable 'eradj' set but not used [-Wunused-but-set-variable] double eradi,eradj,rradi,rradj; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:606:32: warning: variable 'fn' set but not used [-Wunused-but-set-variable] double rij,rsqinv,R,fx,fy,fz,fn[3],ft[3],fpair,shift,energy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:606:38: warning: variable 'ft' set but not used [-Wunused-but-set-variable] double rij,rsqinv,R,fx,fy,fz,fn[3],ft[3],fpair,shift,energy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp: In member function 'int LAMMPS_NS::PairBodyRoundedPolygon::vertex_against_edge(int, int, double, double, double**, double**, double**, LAMMPS_NS::tagint*, LAMMPS_NS::PairBodyRoundedPolygon::Contact*, int&, double&, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:761:12: warning: unused variable 'xj' [-Wunused-variable] double xj[3], rij; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:709:24: warning: variable 'nei' set but not used [-Wunused-but-set-variable] int ni, npi, ifirst, nei, iefirst; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:709:29: warning: variable 'iefirst' set but not used [-Wunused-but-set-variable] int ni, npi, ifirst, nei, iefirst; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:710:11: warning: variable 'npj' set but not used [-Wunused-but-set-variable] int nj, npj, jfirst, nej, jefirst; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:711:32: warning: variable 'eradi' set but not used [-Wunused-but-set-variable] double xpi[3], xpj[3], dist, eradi, eradj, rradi, rradj; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:712:22: warning: unused variable 'rx' [-Wunused-variable] double fx, fy, fz, rx, ry, rz, energy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:712:26: warning: unused variable 'ry' [-Wunused-variable] double fx, fy, fz, rx, ry, rz, energy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:712:30: warning: unused variable 'rz' [-Wunused-variable] double fx, fy, fz, rx, ry, rz, energy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:714:7: warning: unused variable 'nlocal' [-Wunused-variable] int nlocal = atom->nlocal; ^ [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolyhedron::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:278:11: warning: variable 'interact' set but not used [-Wunused-but-set-variable] int interact, num_contacts; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolyhedron::sphere_against_sphere(int, int, int, int, double, double, double, double, double**, double**, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:606:50: warning: unused variable 'shift' [-Wunused-variable] double rij,rsqinv,R,fx,fy,fz,fn[3],ft[3],fpair,shift,energy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolyhedron::sphere_against_edge(int, int, int, int, double**, double**, double**, double**, double**, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:688:57: warning: unused variable 'shift' [-Wunused-variable] double delx,dely,delz,rsq,rij,rsqinv,R,fx,fy,fz,fpair,shift,energy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolyhedron::sphere_against_face(int, int, int, int, double**, double**, double**, double**, double**, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:838:57: warning: unused variable 'shift' [-Wunused-variable] double delx,dely,delz,rsq,rij,rsqinv,R,fx,fy,fz,fpair,shift,energy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'int LAMMPS_NS::PairBodyRoundedPolyhedron::edge_against_edge(int, int, int, int, double**, LAMMPS_NS::PairBodyRoundedPolyhedron::Contact*, int&, double&, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:991:21: warning: unused variable 'contact' [-Wunused-variable] int ni,nei,nj,nej,contact,interact; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'int LAMMPS_NS::PairBodyRoundedPolyhedron::edge_against_face(int, int, int, int, double**, LAMMPS_NS::PairBodyRoundedPolyhedron::Contact*, int&, double&, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:1048:21: warning: unused variable 'contact' [-Wunused-variable] int ni,nei,nj,nfj,contact,interact; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'int LAMMPS_NS::PairBodyRoundedPolyhedron::interaction_edge_to_edge(int, int, double*, double, int, int, double*, double, int, int, double, LAMMPS_NS::PairBodyRoundedPolyhedron::Contact*, int&, double&, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:1121:24: warning: unused variable 'shift' [-Wunused-variable] double contact_dist, shift; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'int LAMMPS_NS::PairBodyRoundedPolyhedron::interaction_face_to_edge(int, int, double*, double, int, int, double*, double, int, int, double, LAMMPS_NS::PairBodyRoundedPolyhedron::Contact*, int&, double&, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:1317:48: warning: unused variable 'shift' [-Wunused-variable] double hi1[3], hi2[3], d1, d2, contact_dist, shift; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolyhedron::sanity_check()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:2348:22: warning: variable 'x3' set but not used [-Wunused-but-set-variable] double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b,u[3],v[3],n[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:2348:28: warning: variable 'x4' set but not used [-Wunused-but-set-variable] double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b,u[3],v[3],n[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:2348:56: warning: unused variable 'u' [-Wunused-variable] double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b,u[3],v[3],n[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:2348:61: warning: unused variable 'v' [-Wunused-variable] double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b,u[3],v[3],n[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:2348:66: warning: unused variable 'n' [-Wunused-variable] double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b,u[3],v[3],n[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:2350:7: warning: unused variable 'inside_a' [-Wunused-variable] int inside_a, inside_b; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:2350:17: warning: unused variable 'inside_b' [-Wunused-variable] int inside_a, inside_b; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolygon::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:107:15: warning: 'iefirst' may be used uninitialized in this function [-Wmaybe-uninitialized] int nei,nej,iefirst,jefirst; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:235:7: warning: 'nei' may be used uninitialized in this function [-Wmaybe-uninitialized] for (ni = 0; ni < nei; ni++) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:106:21: warning: 'ifirst' may be used uninitialized in this function [-Wmaybe-uninitialized] int ni,nj,npi,npj,ifirst,jfirst; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:223:7: warning: 'npi' may be used uninitialized in this function [-Wmaybe-uninitialized] for (ni = 0; ni < npi; ni++) { ^ [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp: In member function 'virtual void LAMMPS_NS::AngleClass2::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:376:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&theta0[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:377:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k2[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:378:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k3[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:379:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k4[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:381:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bb_k[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:382:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bb_r1[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:383:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bb_r2[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:385:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ba_k1[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:386:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ba_k2[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:387:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ba_r1[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:388:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ba_r2[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolyhedron::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:222:21: warning: 'eradi' may be used uninitialized in this function [-Wmaybe-uninitialized] if (r > eradi + eradj + cut_inner) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:124:43: warning: 'iefirst' may be used uninitialized in this function [-Wmaybe-uninitialized] int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:248:7: warning: 'nei' may be used uninitialized in this function [-Wmaybe-uninitialized] for (ni = 0; ni < nei; ni++) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:124:21: warning: 'ifirst' may be used uninitialized in this function [-Wmaybe-uninitialized] int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:234:7: warning: 'npi' may be used uninitialized in this function [-Wmaybe-uninitialized] for (ni = 0; ni < npi; ni++) { ^ [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/bond_class2.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/bond_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/bond_class2.cpp [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/bond_class2.cpp: In member function 'virtual void LAMMPS_NS::BondClass2::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/bond_class2.cpp:187:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/bond_class2.cpp:188:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k2[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/bond_class2.cpp:189:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k3[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/bond_class2.cpp:190:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k4[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp: In member function 'virtual void LAMMPS_NS::DihedralClass2::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:840:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:841:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:842:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k3[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:843:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&phi1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:844:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&phi2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:845:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&phi3[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:847:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mbt_f1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:848:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mbt_f2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:849:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mbt_f3[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:850:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mbt_r0[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:852:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ebt_f1_1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:853:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ebt_f2_1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:854:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ebt_f3_1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:855:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ebt_r0_1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:857:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ebt_f1_2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:858:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ebt_f2_2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:859:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ebt_f3_2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:860:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ebt_r0_2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:862:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&at_f1_1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:863:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&at_f2_1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:864:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&at_f3_1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:865:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&at_theta0_1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:867:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&at_f1_2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:868:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&at_f2_2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:869:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&at_f3_2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:870:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&at_theta0_2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:872:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aat_k[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:873:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aat_theta0_1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:874:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aat_theta0_2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:876:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bb13t_k[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:877:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bb13t_r10[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:878:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bb13t_r30[1],sizeof(double),atom->ndihedraltypes,fp); ^ [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp: In member function 'virtual void LAMMPS_NS::ImproperClass2::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp:609:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k0[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp:610:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&chi0[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp:612:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aa_k1[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp:613:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aa_k2[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp:614:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aa_k3[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp:615:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aa_theta0_1[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp:616:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aa_theta0_2[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp:617:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aa_theta0_3[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp: In member function 'void LAMMPS_NS::ImproperClass2::angleangle(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp:825:58: warning: 'eimproper' may be used uninitialized in this function [-Wmaybe-uninitialized] delxBD-delxBC,delyBD-delyBC,delzBD-delzBC); ^ [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp:310:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp:314:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp:315:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp:316:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp:345:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp:346:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp:347:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp:348:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:364:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:368:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:369:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:370:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:371:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:401:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:402:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:403:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:404:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:405:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulCut::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:462:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:462:37: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:144:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:144:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:406:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:410:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:411:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:412:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:443:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:444:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:445:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:446:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:447:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:448:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:449:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/fix_wall_colloid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/fix_wall_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/fix_wall_colloid.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulLong::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:538:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:538:37: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:531:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:531:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:534:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:529:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:177:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:182:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:185:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:185:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:179:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:179:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian_poly.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian_poly.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:610:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:614:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:615:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:650:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mu,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:651:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flaglog,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:652:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flagfld,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:653:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:654:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:655:42: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&t_target, sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:656:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&seed, sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:657:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:658:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:659:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flagHI,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:660:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flagVF,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:309:42: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized] Fbmag = prethermostat*sqrt(a_pu); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:241:42: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized] Fbmag = prethermostat*sqrt(a_sh); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian_poly.cpp: In member function 'virtual void LAMMPS_NS::PairBrownianPoly::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian_poly.cpp:296:42: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized] Fbmag = prethermostat*sqrt(a_pu); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian_poly.cpp:245:42: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized] Fbmag = prethermostat*sqrt(a_sh); ^ [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:401:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (comm->me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:405:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a12[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:406:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:407:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&d1[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:408:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&d2[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:409:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:439:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:440:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:441:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp: In member function 'virtual double LAMMPS_NS::PairColloid::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:544:20: warning: 'phi' may be used uninitialized in this function [-Wmaybe-uninitialized] return factor_lj*phi; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp: In member function 'virtual void LAMMPS_NS::PairLubricate::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:690:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:694:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:695:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp: In member function 'virtual void LAMMPS_NS::PairLubricate::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:728:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mu,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:729:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flaglog,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:730:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flagfld,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:731:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:732:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:733:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:734:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:735:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flagHI,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:736:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flagVF,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:195:22: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] f[i][2] += delz*fpair; ^ [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU_poly.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU_poly.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp: In member function 'virtual void LAMMPS_NS::PairLubricateU::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1917:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1921:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1922:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp: In member function 'virtual void LAMMPS_NS::PairLubricateU::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1954:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mu,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1955:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flaglog,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1956:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1957:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1958:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1959:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1960:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flagHI,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1961:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flagVF,sizeof(int),1,fp); ^ [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate_poly.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate_poly.cpp [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_yukawa_colloid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_yukawa_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_yukawa_colloid.cpp [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/atom_vec_dipole.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/atom_vec_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/atom_vec_dipole.cpp [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:441:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:445:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:446:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:447:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:448:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:477:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:478:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:479:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:480:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:240:34: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += qtmp*r3inv*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:238:35: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += -q[j]*r3inv*pidotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:236:29: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:236:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:240:28: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += qtmp*r3inv*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:245:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:495:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:499:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:500:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:501:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:529:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:530:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:531:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:532:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:297:70: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:297:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:297:54: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:294:47: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:294:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:294:31: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:297:70: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:297:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:297:54: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:302:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongDipoleLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:351:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:355:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:356:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:357:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongDipoleLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:386:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:387:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:388:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:389:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:390:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ewald_order,sizeof(int),1,fp); ^ [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_freeze.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_freeze.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_freeze.cpp [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_pour.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_pour.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_pour.cpp [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_wall_gran.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_wall_gran.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_wall_gran.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_wall_gran.cpp: In member function 'void LAMMPS_NS::FixWallGran::bonded_history(double, double, double, double, double*, double, double*, double*, double*, double*, double, double, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_wall_gran.cpp:797:56: warning: variable 'vrlmaginv' set but not used [-Wunused-but-set-variable] double relrot1,relrot2,relrot3,vrl1,vrl2,vrl3,vrlmag,vrlmaginv; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_pour.cpp: In member function 'virtual void LAMMPS_NS::FixPour::pre_exchange()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_pour.cpp:676:42: warning: 'natom' may be used uninitialized in this function [-Wmaybe-uninitialized] int ninserted_mols = ninserted_atoms / natom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_pour.cpp:692:35: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] atom->nbonds += onemols[imol]->nbonds * ninserted_mols; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_pour.cpp:650:65: warning: 'denstmp' may be used uninitialized in this function [-Wmaybe-uninitialized] atom->rmass[n] = 4.0*MY_PI/3.0 * radtmp*radtmp*radtmp * denstmp; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_pour.cpp:499:30: warning: 'radtmp' may be used uninitialized in this function [-Wmaybe-uninitialized] coords[0][3] = radtmp; ^ [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_wall_gran_region.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_wall_gran_region.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_wall_gran_region.cpp [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hertz_history.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hertz_history.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hertz_history.cpp [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke.cpp.o [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp: In member function 'virtual void LAMMPS_NS::PairGranHookeHistory::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp:540:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp: In member function 'virtual void LAMMPS_NS::PairGranHookeHistory::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp:566:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&kn,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp:567:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&kt,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp:568:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&gamman,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp:569:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&gammat,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp:570:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&xmu,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp:571:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&dampflag,sizeof(int),1,fp); ^ [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/ewald.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/ewald.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/ewald.cpp [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/ewald_disp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/ewald_disp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/ewald_disp.cpp [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d.cpp: In function 'void fft_3d(double (*)[2], double (*)[2], int, fft_plan_3d*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d.cpp:69:9: warning: variable 'total' set but not used [-Wunused-but-set-variable] int i,total,length,offset,num; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d.cpp:69:15: warning: variable 'length' set but not used [-Wunused-but-set-variable] int i,total,length,offset,num; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d.cpp:69:22: warning: unused variable 'offset' [-Wunused-variable] int i,total,length,offset,num; ^ [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d_wrap.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d_wrap.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d_wrap.cpp [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fix_tune_kspace.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fix_tune_kspace.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fix_tune_kspace.cpp [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/gridcomm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/gridcomm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/gridcomm.cpp [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm_cg.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm_cg.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm_cg.cpp [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:427:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:431:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:432:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&rho[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:433:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:434:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&c[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:435:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&d[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:436:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:470:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:471:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:472:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:473:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:474:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:475:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:476:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulLong::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:568:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:569:28: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] d[itype][jtype]*r2inv*r6inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:561:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:561:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:564:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:559:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:191:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:183:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:188:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:192:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:185:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:185:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp: In member function 'virtual void LAMMPS_NS::MSM::direct(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1640:47: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v5sum += v5_directn[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1639:47: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v4sum += v4_directn[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1638:47: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v3sum += v3_directn[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1637:47: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v2sum += v2_directn[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1636:47: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v1sum += v1_directn[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1635:47: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v0sum += v0_directn[k] * qtmp2; ^ [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp: In member function 'void LAMMPS_NS::MSM::direct_top(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1995:50: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v5sum += v5_direct_top[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1994:50: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v4sum += v4_direct_top[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1993:50: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v3sum += v3_direct_top[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1992:50: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v2sum += v2_direct_top[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1991:50: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v1sum += v1_direct_top[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1990:50: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v0sum += v0_direct_top[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulMSM::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp:189:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp:186:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp:185:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp:190:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulMSM::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp:248:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp:249:28: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] d[itype][jtype]*r2inv*r6inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp:244:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp:243:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*egamma; ^ [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:404:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:408:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:409:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&rho[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:410:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&c[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:411:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:443:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:444:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:445:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:446:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:447:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:448:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:449:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulLong::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:539:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:539:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:532:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:532:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:535:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:530:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:184:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:176:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:181:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:184:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:178:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:178:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckLongCoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:360:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:364:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&buck_a_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:365:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&buck_rho_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:366:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&buck_c_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:367:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_buck_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckLongCoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:399:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_buck_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:400:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:401:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:402:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:403:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:404:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:405:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ewald_order,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulMSM::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp:185:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp:182:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp:181:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp:185:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulMSM::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp:243:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp:243:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp:239:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp:238:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*egamma; ^ [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:297:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:300:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&scale[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:326:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:327:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:328:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:329:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:330:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairCoulLong::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:377:29: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:379:26: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:379:38: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:377:29: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:161:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:166:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:163:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:163:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:830:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:834:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:835:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:836:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&eps14[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:837:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma14[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:869:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_inner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:870:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:871:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:872:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:873:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:874:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:875:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairCoulMSM::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp:152:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp:147:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp:149:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp:149:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairCoulMSM::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp:207:31: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp:209:26: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp:209:38: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp:207:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulLong::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:974:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:966:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:966:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:969:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:964:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*erfc; ^ [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::compute_outer(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:549:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * (erfc + EWALD_F*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:521:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:549:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * (erfc + EWALD_F*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:549:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * (erfc + EWALD_F*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:555:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = ptable[itable] + fraction*dptable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:552:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = vtable[itable] + fraction*dvtable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:197:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:202:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:206:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:199:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:199:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:206:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulMSM::compute_outer(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:387:39: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:415:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * fgamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:387:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:421:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = ptable[itable] + fraction*dptable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:418:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = vtable[itable] + fraction*dvtable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulMSM::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:524:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:516:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:516:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:519:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:514:33: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulMSM::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:217:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:212:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:221:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:214:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:214:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:221:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:900:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:904:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:905:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:906:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&eps14[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:907:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma14[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:939:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_inner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:940:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:941:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:942:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:943:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:944:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:945:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmfswCoulLong::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1053:34: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj6 = -lj4[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1048:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1036:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1036:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1039:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1034:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::compute_outer(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:611:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * (erfc + EWALD_F*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:573:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:611:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * (erfc + EWALD_F*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:611:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * (erfc + EWALD_F*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:633:76: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] forcelj = r6inv * (lj1[itype][jtype]*r6inv - lj2[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:590:27: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] rinv = 1.0/r; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:617:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = ptable[itable] + fraction*dptable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:614:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = vtable[itable] + fraction*dvtable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:800:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:804:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:805:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:806:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:837:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:838:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:839:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:840:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:841:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:842:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:843:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:219:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:224:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:240:42: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl6 = -lj4[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:221:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:221:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:238:47: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl12 = r6inv*lj3[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulLong::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:934:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:926:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:926:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:929:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:924:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::compute_outer(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:537:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * (erfc + EWALD_F*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:513:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:537:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * (erfc + EWALD_F*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:537:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * (erfc + EWALD_F*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:543:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = ptable[itable] + fraction*dptable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:540:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = vtable[itable] + fraction*dvtable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:183:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:188:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:192:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:185:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:185:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulMSM::compute_outer(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:366:39: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:390:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * fgamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:366:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:396:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = ptable[itable] + fraction*dptable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:393:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = vtable[itable] + fraction*dvtable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:537:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeO,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:538:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeH,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:539:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeB,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:540:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeA,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:541:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&qdist,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:543:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:544:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:545:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:546:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:547:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:548:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:549:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulMSM::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:476:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:468:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:468:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:471:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:466:33: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulMSM::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:209:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:204:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:213:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:206:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:206:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:415:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:420:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:417:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:410:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:409:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:337:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:333:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:417:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongCoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:360:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:364:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:365:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:366:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongCoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:397:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:398:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:399:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:400:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:401:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:402:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:403:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ewald_order,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1549:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeO,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1550:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeH,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1551:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeB,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1552:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeA,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1553:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&qdist,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1555:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1556:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1557:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1558:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1559:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1560:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_middle()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:980:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:976:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:949:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:945:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:451:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:456:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:453:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:446:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:445:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:373:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:369:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:453:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_inner()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:719:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:715:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:688:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:684:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_outer(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1422:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1421:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1323:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1319:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:476:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeO,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:477:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeH,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:478:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeB,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:479:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeA,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:480:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&qdist,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:383:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:388:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:385:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:378:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:377:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:305:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:301:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:385:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm.cpp [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_cg.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_cg.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_cg.cpp [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_disp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_disp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_disp.cpp [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_disp_tip4p.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_disp_tip4p.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_disp_tip4p.cpp [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_stagger.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_stagger.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_stagger.cpp [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_tip4p.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_tip4p.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_tip4p.cpp [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/remap.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/remap.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/remap.cpp [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/remap_wrap.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/remap_wrap.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/remap_wrap.cpp [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/fix_qeq_comb.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/fix_qeq_comb.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/fix_qeq_comb.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/fix_qeq_comb.cpp: In member function 'virtual void LAMMPS_NS::FixQEQComb::post_force(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/fix_qeq_comb.cpp:262:20: warning: 'ilist' may be used uninitialized in this function [-Wmaybe-uninitialized] i = ilist[ii]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/fix_qeq_comb.cpp:224:5: warning: 'inum' may be used uninitialized in this function [-Wmaybe-uninitialized] for (ii = 0; ii < inum; ii++) { ^ [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp: In member function 'void LAMMPS_NS::PairADP::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp:564:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp:565:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp:566:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp:567:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp:592:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp:616:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp: In member function 'void LAMMPS_NS::PairADP::grab(FILE*, int, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp:928:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp: In member function 'void LAMMPS_NS::PairADP::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp:629:57: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized] if (me == 0) grab(fp,file->nr,&file->z2r[i][j][1]); ^ [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3385:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3391:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3393:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3395:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3397:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3399:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3401:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3403:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3405:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3407:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3409:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3411:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3413:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3415:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3417:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3419:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3421:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3423:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3425:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3427:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3429:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3431:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3433:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3435:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3437:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3439:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3441:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3443:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3445:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3447:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3449:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3451:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3453:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3455:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3457:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3459:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3461:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3463:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3465:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3467:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3469:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3471:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3473:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3475:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3477:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3482:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3484:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3486:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3488:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3490:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3492:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3494:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3496:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3498:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3500:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3502:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3504:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3506:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3508:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3510:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3512:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3514:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3516:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3518:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3520:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3522:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3527:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3529:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3531:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3533:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3535:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3537:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3539:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3541:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3543:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3550:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3551:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3552:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3556:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3560:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3563:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3566:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3570:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3573:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3580:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3581:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3582:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3584:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3588:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3592:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3596:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3603:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3604:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3605:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3607:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3612:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3616:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3621:30: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3629:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3630:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3631:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3632:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3637:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3641:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3646:30: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3654:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3655:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3656:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3658:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3663:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3667:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3673:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3682:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3683:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3684:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3686:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3691:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3695:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3701:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3710:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3711:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3712:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3714:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3719:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3723:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3729:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3738:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3739:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3740:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3742:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3747:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3751:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3757:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo_morse.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo_morse.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::TORSION(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:1244:64: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] ev_tally4(i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl); ^ [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_bop.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_bop.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_bop.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::Spbicubic(double, double, double*, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:4025:49: warning: 'yn1' may be used uninitialized in this function [-Wmaybe-uninitialized] if (j > 0) df[1] += c * ((double) j) * xn * yn1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::Sptricubic(double, double, double, double*, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:4065:46: warning: 'zn1' may be used uninitialized in this function [-Wmaybe-uninitialized] if (k > 0) df[2] += c * kr * xn * yn * zn1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::piRCSpline(double, double, double, int, int, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3286:10: warning: 'piRC' may be used uninitialized in this function [-Wmaybe-uninitialized] return piRC; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_bop.cpp: In member function 'void LAMMPS_NS::PairBOP::read_table(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_bop.cpp:4991:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for(j=0;jnr,&file->z2r[i][j][1]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::force_zeta(LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double, double, double, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, int, double&, double, double, int, int, int, double, double, double)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_comb3.cpp:1799:48: warning: 'prady' may be used uninitialized in this function [-Wmaybe-uninitialized] prady += 1.0 * btor[2] * bbtor * att_eng; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_comb3.cpp:1798:48: warning: 'pradx' may be used uninitialized in this function [-Wmaybe-uninitialized] pradx += 1.0 * btor[1] * bbtor * att_eng; ^ [ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_cd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_cd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_cd.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::direct(LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, int, int, int, double, double, double, double, double, double, double, double, double&, double&, int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_comb3.cpp:2804:20: warning: 'dcurlji' may be used uninitialized in this function [-Wmaybe-uninitialized] smf1n += dcurlji*iq*(afbn-fafbnl)*esucon/r; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_comb3.cpp:2807:20: warning: 'dcurlij' may be used uninitialized in this function [-Wmaybe-uninitialized] smf1j += dcurlij*jq*(afbj-fafbnl)*esucon/r; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_cd.cpp: In member function 'virtual void LAMMPS_NS::PairEAMCD::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_cd.cpp:388:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair += D_i * rhojp * t1; ^ [ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp [ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eim.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eim.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eim.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFS::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp:143:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp:168:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp:194:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eim.cpp: In member function 'int LAMMPS_NS::PairEIM::grabpair(FILE*, int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eim.cpp:971:35: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eim.cpp:975:35: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp:210:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized] if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]); ^ [ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_gw.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_gw.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_gw.cpp [ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_gw_zbl.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_gw_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_gw_zbl.cpp [ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp [ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_nb3b_harmonic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_nb3b_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_nb3b_harmonic.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp: In member function 'void LAMMPS_NS::PairLCBOP::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:988:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:994:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&r_1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:995:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&r_2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:996:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&gamma_1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:997:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&A); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:998:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&B_1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:999:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&B_2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1000:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&alpha); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1001:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&beta_1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1002:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&beta_2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1003:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&d); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1004:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&C_1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1005:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&C_4); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1006:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&C_6); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1007:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&L); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1008:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&kappa); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1009:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&R_0); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1010:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&R_1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1011:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&r_0); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1012:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&r_1_LR); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1013:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&r_2_LR); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1014:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&v_1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1015:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&v_2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1016:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&eps_1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1017:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&eps_2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1018:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&lambda_1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1019:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&lambda_2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1020:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&eps); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1021:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&delta); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1024:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1033:30: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1040:40: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] while (1) { fgets(s,MAXLINE,fp); if (s[0] != '#') break; } ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1047:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1053:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_rebo.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_rebo.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_rebo.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp: In member function 'virtual void LAMMPS_NS::PairPolymorphic::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:580:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:581:60: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] while (line == strchr(line,'#')) fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:597:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:615:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:651:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp: In member function 'void LAMMPS_NS::PairPolymorphic::grab(FILE*, int, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:882:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_sw.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_sw.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_sw.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp: In member function 'virtual void LAMMPS_NS::PairPolymorphic::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:263:7: warning: 'emb' may be used uninitialized in this function [-Wmaybe-uninitialized] if (emb > epsilon) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:291:82: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally(i,i,nlocal,newton_pair,evdwl,0.0,0.0,delx,dely,delz); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:291:82: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:291:82: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff.cpp [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff_mod.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff_mod.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff_mod.cpp [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff_mod_c.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff_mod_c.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff_mod_c.cpp [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff_zbl.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff_zbl.cpp [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_vashishta.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_vashishta.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_vashishta.cpp [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_vashishta_table.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_vashishta_table.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_vashishta_table.cpp [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_atom_swap.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_atom_swap.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_atom_swap.cpp [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_break.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_break.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_break.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_atom_swap.cpp: In member function 'int LAMMPS_NS::FixAtomSwap::attempt_semi_grand()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_atom_swap.cpp:391:54: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized] atom->v[i][0] *= sqrt_mass_ratio[itype][jtype]; ^ [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_create.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_create.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_create.cpp [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp: In member function 'virtual void LAMMPS_NS::FixBondSwap::post_integrate()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:629:44: warning: 'jlast' may be used uninitialized in this function [-Wmaybe-uninitialized] for (jangle = 0; jangle < num_angle[jlast]; jangle++) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:607:44: warning: 'jprev' may be used uninitialized in this function [-Wmaybe-uninitialized] for (jangle = 0; jangle < num_angle[jprev]; jangle++) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:202:25: warning: 'jnext' may be used uninitialized in this function [-Wmaybe-uninitialized] int inext,iprev,ilast,jnext,jprev,jlast,ibond,iangle,jbond,jangle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:618:44: warning: 'ilast' may be used uninitialized in this function [-Wmaybe-uninitialized] for (iangle = 0; iangle < num_angle[ilast]; iangle++) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:491:39: warning: 'iprev' may be used uninitialized in this function [-Wmaybe-uninitialized] if (iprev >= 0) iprevtag = tag[iprev]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:202:7: warning: 'inext' may be used uninitialized in this function [-Wmaybe-uninitialized] int inext,iprev,ilast,jnext,jprev,jlast,ibond,iangle,jbond,jangle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:414:53: warning: 'jnextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized] angle_eng(jnextangletype,i,jnext,jlast) + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:419:49: warning: 'jangletype' may be used uninitialized in this function [-Wmaybe-uninitialized] angle_eng(jangletype,jprev,j,jnext) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:418:53: warning: 'inextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized] angle_eng(inextangletype,i,inext,ilast) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:413:56: warning: 'iangletype' may be used uninitialized in this function [-Wmaybe-uninitialized] delta += angle_eng(iangletype,iprev,i,jnext) + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:457:37: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized] for (jbond = 0; jbond < num_bond[j]; jbond++) ^ [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_gcmc.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_gcmc.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_gcmc.cpp [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_tfmc.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_tfmc.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_tfmc.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_tfmc.cpp: In member function 'virtual void LAMMPS_NS::FixTFMC::initial_integrate(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_tfmc.cpp:255:36: warning: 'masstotal' may be used uninitialized in this function [-Wmaybe-uninitialized] group->xcm(igroup,masstotal,cm); ^ [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_gcmc.cpp: In member function 'double LAMMPS_NS::FixGCMC::energy_full()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_gcmc.cpp:2296:11: warning: 'imolecule' may be used uninitialized in this function [-Wmaybe-uninitialized] if (imolecule == molecule[j]) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp: In member function 'virtual void LAMMPS_NS::PairDSMC::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp:350:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp:354:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp:355:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp: In member function 'virtual void LAMMPS_NS::PairDSMC::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp:383:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp:384:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&max_cell_size,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp:385:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&seed,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp:386:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp:387:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/compute_msd_nongauss.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/compute_msd_nongauss.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/compute_msd_nongauss.cpp [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/compute_ti.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/compute_ti.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/compute_ti.cpp [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp: In function 'int sizeofint(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:559:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] while (size >= num && num_of_bits < 32) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp: In function 'int sizeofints(int, unsigned int*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:600:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] while (bytes[num_of_bytes] >= num) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp: In function 'void sendints(int*, int, int, unsigned int*, unsigned int*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:654:37: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if (num_of_bits >= num_of_bytes * 8) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:655:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (i = 0; i < num_of_bytes; i++) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:660:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (i = 0; i < num_of_bytes-1; i++) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp: In function 'int receivebits(int*, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:695:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if (lastbits < num_of_bits) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp: In function 'int xdr3dfcoord(XDR*, float*, int*, float*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:397:54: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] #define LASTIDX (sizeof(magicints) / sizeof(int) - 1 ) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:935:23: note: in expansion of macro 'LASTIDX' while (smallidx < LASTIDX && magicints[smallidx] < mindiff) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:46:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] #define MYMIN(a,b) ((a) < (b) ? (a) : (b)) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:939:14: note: in expansion of macro 'MYMIN' maxidx = MYMIN(LASTIDX, smallidx + 8) ; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:46:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] #define MYMIN(a,b) ((a) < (b) ? (a) : (b)) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:1115:14: note: in expansion of macro 'MYMIN' maxidx = MYMIN(LASTIDX, smallidx + 8) ; ^ [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_deposit.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_deposit.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_deposit.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:1141:54: warning: 'bitsizeint[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] thiscoord[2] = receivebits(buf, bitsizeint[2]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:1140:54: warning: 'bitsizeint[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] thiscoord[1] = receivebits(buf, bitsizeint[1]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:1139:54: warning: 'bitsizeint[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] thiscoord[0] = receivebits(buf, bitsizeint[0]); ^ [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_efield.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_efield.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_efield.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_deposit.cpp: In member function 'virtual void LAMMPS_NS::FixDeposit::pre_exchange()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_deposit.cpp:529:56: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] else atom->avec->create_atom(ntype+onemols[imol]->type[m],coords[m]); ^ [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_evaporate.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_evaporate.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_evaporate.cpp [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_gld.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_gld.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_gld.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_evaporate.cpp: In member function 'virtual void LAMMPS_NS::FixEvaporate::pre_exchange()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_evaporate.cpp:324:31: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] } else if (me == proc && i == iatom) { ^ [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_oneway.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_oneway.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_oneway.cpp [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_orient_bcc.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_orient_bcc.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_orient_bcc.cpp [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_orient_fcc.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_orient_fcc.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_orient_fcc.cpp [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_thermal_conductivity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_thermal_conductivity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_thermal_conductivity.cpp [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_ttm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_ttm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_ttm.cpp [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_viscosity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_viscosity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_viscosity.cpp [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp: In member function 'virtual double LAMMPS_NS::PairNMCut::init_one(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:277:12: warning: unused variable 'rr1' [-Wunused-variable] double rr1 = mm[i][j]*(nn[i][j]-1)*pow(r0[i][j],nn[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:278:12: warning: unused variable 'rr2' [-Wunused-variable] double rr2 = nn[i][j]*(mm[i][j]-1)*pow(r0[i][j],mm[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:279:12: warning: unused variable 'p1' [-Wunused-variable] double p1 = 1-nn[i][j]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:280:12: warning: unused variable 'p2' [-Wunused-variable] double p2 = 1-mm[i][j]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:282:12: warning: unused variable 'rrr1' [-Wunused-variable] double rrr1 = pow(r0[i][j],nn[i][j])*(1-nn[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:283:12: warning: unused variable 'rrr2' [-Wunused-variable] double rrr2 = pow(r0[i][j],mm[i][j])*(1-mm[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:331:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:335:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&e0[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:336:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:337:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&nn[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:338:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mm[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:339:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:369:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:370:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:371:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:372:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulCut::init_one(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:327:12: warning: unused variable 'rr1' [-Wunused-variable] double rr1 = mm[i][j]*(nn[i][j]-1)*pow(r0[i][j],nn[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:328:12: warning: unused variable 'rr2' [-Wunused-variable] double rr2 = nn[i][j]*(mm[i][j]-1)*pow(r0[i][j],mm[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:329:12: warning: unused variable 'p1' [-Wunused-variable] double p1 = 1-nn[i][j]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:330:12: warning: unused variable 'p2' [-Wunused-variable] double p2 = 1-mm[i][j]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:332:12: warning: unused variable 'rrr1' [-Wunused-variable] double rrr1 = pow(r0[i][j],nn[i][j])*(1-nn[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:333:12: warning: unused variable 'rrr2' [-Wunused-variable] double rrr2 = pow(r0[i][j],mm[i][j])*(1-mm[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:382:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:386:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&e0[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:387:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:388:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&nn[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:389:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mm[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:390:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:391:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:423:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:424:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:425:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:426:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:427:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulCut::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:487:65: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:151:58: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized] r0n[itype][jtype]*rninv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:153:58: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized] r0m[itype][jtype]*rminv) - ^ [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/xdr_compat.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/xdr_compat.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/xdr_compat.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulLong::init_one(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:374:12: warning: unused variable 'rr1' [-Wunused-variable] double rr1 = mm[i][j]*(nn[i][j]-1)*pow(r0[i][j],nn[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:375:12: warning: unused variable 'rr2' [-Wunused-variable] double rr2 = nn[i][j]*(mm[i][j]-1)*pow(r0[i][j],mm[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:376:12: warning: unused variable 'p1' [-Wunused-variable] double p1 = 1-nn[i][j]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:377:12: warning: unused variable 'p2' [-Wunused-variable] double p2 = 1-mm[i][j]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:379:12: warning: unused variable 'rrr1' [-Wunused-variable] double rrr1 = pow(r0[i][j],nn[i][j])*(1-nn[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:380:12: warning: unused variable 'rrr2' [-Wunused-variable] double rrr2 = pow(r0[i][j],mm[i][j])*(1-mm[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:429:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:433:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&e0[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:434:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:435:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&nn[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:436:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mm[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:437:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:470:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:471:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:472:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:473:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:474:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:475:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:476:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_charmm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_charmm.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulLong::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:562:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:562:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:565:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:560:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:572:65: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:187:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:192:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:197:50: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized] (mm[itype][jtype]*r0n[itype][jtype]*rninv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:198:50: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized] nn[itype][jtype]*r0m[itype][jtype]*rminv) - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:189:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:189:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_charmm.cpp: In member function 'virtual void LAMMPS_NS::AngleCharmm::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_charmm.cpp:249:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_charmm.cpp:250:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&theta0[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_charmm.cpp:251:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k_ub[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_charmm.cpp:252:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r_ub[1],sizeof(double),atom->nangletypes,fp); ^ [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine.cpp [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_delta.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_delta.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_delta.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine.cpp: In member function 'virtual void LAMMPS_NS::AngleCosine::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine.cpp:197:70: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (comm->me == 0) fread(&k[1],sizeof(double),atom->nangletypes,fp); ^ [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_periodic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_periodic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_periodic.cpp [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_squared.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_squared.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_squared.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_periodic.cpp: In member function 'virtual void LAMMPS_NS::AngleCosinePeriodic::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_periodic.cpp:250:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_periodic.cpp:251:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&b[1],sizeof(int),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_periodic.cpp:252:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&multiplicity[1],sizeof(int),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_squared.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineSquared::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_squared.cpp:219:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_squared.cpp:220:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&theta0[1],sizeof(double),atom->nangletypes,fp); ^ [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_harmonic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_harmonic.cpp [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_harmonic.cpp: In member function 'virtual void LAMMPS_NS::AngleHarmonic::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_harmonic.cpp:219:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_harmonic.cpp:220:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&theta0[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp: In member function 'virtual void LAMMPS_NS::AngleTable::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp:292:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabstyle,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp:293:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tablength,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp: In member function 'void LAMMPS_NS::AngleTable::read_table(LAMMPS_NS::AngleTable::Table*, char*, char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp:385:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); // no match, skip section ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp:387:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp:388:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp:394:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp:403:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp:405:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_angle.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_angle.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_angle.cpp [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_bond.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_bond.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_bond.cpp [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_full.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_full.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_full.cpp [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_molecular.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_molecular.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_molecular.cpp [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_template.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_template.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_template.cpp [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene.cpp: In member function 'virtual void LAMMPS_NS::BondFENE::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene.cpp:220:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene.cpp:221:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene.cpp:222:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene.cpp:223:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[1],sizeof(double),atom->nbondtypes,fp); ^ [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene_expand.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene_expand.cpp [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_gromos.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_gromos.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_gromos.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene_expand.cpp: In member function 'virtual void LAMMPS_NS::BondFENEExpand::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene_expand.cpp:229:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene_expand.cpp:230:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene_expand.cpp:231:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene_expand.cpp:232:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene_expand.cpp:233:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&shift[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_gromos.cpp: In member function 'virtual void LAMMPS_NS::BondGromos::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_gromos.cpp:172:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_gromos.cpp:173:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[1],sizeof(double),atom->nbondtypes,fp); ^ [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_harmonic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_harmonic.cpp [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_morse.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_morse.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_harmonic.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonic::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_harmonic.cpp:172:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_harmonic.cpp:173:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_morse.cpp: In member function 'virtual void LAMMPS_NS::BondMorse::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_morse.cpp:176:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&d0[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_morse.cpp:177:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_morse.cpp:178:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[1],sizeof(double),atom->nbondtypes,fp); ^ [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_nonlinear.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_nonlinear.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_nonlinear.cpp [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_quartic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_quartic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_quartic.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_nonlinear.cpp: In member function 'virtual void LAMMPS_NS::BondNonlinear::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_nonlinear.cpp:171:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_nonlinear.cpp:172:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_nonlinear.cpp:173:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&lamda[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_quartic.cpp: In member function 'virtual void LAMMPS_NS::BondQuartic::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_quartic.cpp:281:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_quartic.cpp:282:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&b1[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_quartic.cpp:283:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&b2[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_quartic.cpp:284:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&rc[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_quartic.cpp:285:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&u0[1],sizeof(double),atom->nbondtypes,fp); ^ [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmm.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp: In member function 'virtual void LAMMPS_NS::BondTable::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp:236:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabstyle,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp:237:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tablength,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp: In member function 'void LAMMPS_NS::BondTable::read_table(LAMMPS_NS::BondTable::Table*, char*, char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp:314:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); // no match, skip section ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp:316:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp:317:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp:323:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp:335:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmm.cpp: In member function 'virtual void LAMMPS_NS::DihedralCharmm::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmm.cpp:429:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmm.cpp:430:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmm.cpp:431:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&shift[1],sizeof(int),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmm.cpp:432:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&weight[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmm.cpp:433:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&weightflag,sizeof(int),1,fp); ^ [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmmfsw.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmmfsw.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmmfsw.cpp [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_harmonic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_harmonic.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmmfsw.cpp: In member function 'virtual void LAMMPS_NS::DihedralCharmmfsw::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmmfsw.cpp:472:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmmfsw.cpp:473:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmmfsw.cpp:474:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&shift[1],sizeof(int),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmmfsw.cpp:475:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&weight[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmmfsw.cpp:476:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&weightflag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_harmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralHarmonic::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_harmonic.cpp:333:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_harmonic.cpp:334:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sign[1],sizeof(int),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_harmonic.cpp:335:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp); ^ [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_helix.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_helix.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_helix.cpp [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_multi_harmonic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_multi_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_multi_harmonic.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_helix.cpp: In member function 'virtual void LAMMPS_NS::DihedralHelix::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_helix.cpp:325:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aphi[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_helix.cpp:326:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bphi[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_helix.cpp:327:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cphi[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_multi_harmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralMultiHarmonic::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_multi_harmonic.cpp:320:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_multi_harmonic.cpp:321:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_multi_harmonic.cpp:322:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a3[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_multi_harmonic.cpp:323:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a4[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_multi_harmonic.cpp:324:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a5[1],sizeof(double),atom->ndihedraltypes,fp); ^ [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_opls.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_opls.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_opls.cpp [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/fix_cmap.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/fix_cmap.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/fix_cmap.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_opls.cpp: In member function 'virtual void LAMMPS_NS::DihedralOPLS::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_opls.cpp:335:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_opls.cpp:336:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_opls.cpp:337:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k3[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_opls.cpp:338:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k4[1],sizeof(double),atom->ndihedraltypes,fp); ^ [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp: In member function 'virtual void LAMMPS_NS::ImproperCvff::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp:339:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp:340:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sign[1],sizeof(int),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp:341:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&multiplicity[1],sizeof(int),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp: In member function 'virtual void LAMMPS_NS::ImproperCvff::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp:209:15: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized] pd = -pd; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp:208:18: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized] p = 2.0 - p; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/fix_cmap.cpp: In member function 'double LAMMPS_NS::FixCMAP::dihedral_angle_atan2(double, double, double, double, double, double, double, double, double, double)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/fix_cmap.cpp:958:10: warning: 'angle' may be used uninitialized in this function [-Wmaybe-uninitialized] return angle; ^ [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_harmonic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_harmonic.cpp [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_umbrella.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_umbrella.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_umbrella.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_harmonic.cpp: In member function 'virtual void LAMMPS_NS::ImproperHarmonic::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_harmonic.cpp:280:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_harmonic.cpp:281:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&chi[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_umbrella.cpp: In member function 'virtual void LAMMPS_NS::ImproperUmbrella::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_umbrella.cpp:321:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&kw[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_umbrella.cpp:322:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&w0[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_umbrella.cpp:323:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&C[1],sizeof(double),atom->nimpropertypes,fp); ^ [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingLJ::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp:153:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] else k = atom->map(klist[kk]+tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual double LAMMPS_NS::PairHbondDreidingLJ::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp:512:41: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] else k = atom->map(klist[kk]+tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingMorse::coeff(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp:302:9: warning: 'donor_flag' may be used uninitialized in this function [-Wmaybe-uninitialized] if (donor_flag == 0) type2param[i][j][k] = nparams; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingLJ::coeff(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp:375:9: warning: 'donor_flag' may be used uninitialized in this function [-Wmaybe-uninitialized] if (donor_flag == 0) type2param[i][j][k] = nparams; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingMorse::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp:123:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] else k = atom->map(klist[kk]+tagprev); ^ [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual double LAMMPS_NS::PairHbondDreidingMorse::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp:415:41: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] else k = atom->map(klist[kk]+tagprev); ^ [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:379:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:383:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:384:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:385:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&eps14[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:386:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma14[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:440:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_inner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:441:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:442:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul_inner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:443:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:444:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:445:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulCharmm::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:502:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:168:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:201:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:134:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:134:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:437:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:441:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:442:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:443:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&eps14[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:444:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma14[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:474:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_inner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:475:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:476:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:477:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:478:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:621:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:625:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:626:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:627:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:663:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeO,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:664:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeH,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:665:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeB,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:666:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeA,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:667:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&qdist,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:669:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:670:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:671:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:672:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:673:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:534:34: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj6 = -lj4[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:529:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:196:42: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl6 = -lj4[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:194:47: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl12 = r6inv*lj3[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:378:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:377:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:305:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:301:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fH[0]; ^ [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/atom_vec_peri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/atom_vec_peri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/atom_vec_peri.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:480:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:507:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeO,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:508:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeH,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:509:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeB,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:510:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeA,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:511:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&qdist,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:513:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:338:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:337:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:265:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:261:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fH[0]; ^ [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_damage_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_damage_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_damage_atom.cpp [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_dilatation_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_dilatation_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_dilatation_atom.cpp [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_plasticity_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_plasticity_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_plasticity_atom.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_dilatation_atom.cpp: In member function 'virtual void LAMMPS_NS::ComputeDilatationAtom::compute_peratom()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_dilatation_atom.cpp:116:52: warning: 'theta' may be used uninitialized in this function [-Wmaybe-uninitialized] if (mask[i] & groupbit) dilatation[i] = theta[i]; ^ [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/fix_peri_neigh.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/fix_peri_neigh.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/fix_peri_neigh.cpp [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp: In member function 'virtual void LAMMPS_NS::PairPeriEPS::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp:570:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp:574:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bulkmodulus[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp:575:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&shearmodulus[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp:576:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&s00[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp:577:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp:578:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp:579:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&m_yieldstress[i][j],sizeof(double),1,fp); ^ [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_pmb.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_pmb.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_pmb.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp: In member function 'virtual void LAMMPS_NS::PairPeriLPS::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp:495:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp:499:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bulkmodulus[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp:500:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&shearmodulus[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp:501:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&s00[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp:502:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp:503:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_pmb.cpp: In member function 'virtual void LAMMPS_NS::PairPeriPMB::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_pmb.cpp:424:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_pmb.cpp:428:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&kspring[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_pmb.cpp:429:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&s00[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_pmb.cpp:430:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_pmb.cpp:431:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/compute_event_displace.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/compute_event_displace.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/compute_event_displace.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp: In member function 'virtual void LAMMPS_NS::PairPeriVES::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp:552:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp:556:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bulkmodulus[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp:557:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&shearmodulus[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp:558:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&s00[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp:559:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp:560:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp:561:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&m_lambdai[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp:562:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&m_taubi[i][j],sizeof(double),1,fp); ^ [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_event.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_event.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_event.cpp [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_event_prd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_event_prd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_event_prd.cpp [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_event_tad.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_event_tad.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_event_tad.cpp [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_neb.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_neb.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_neb.cpp [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/neb.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/neb.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/neb.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_neb.cpp: In member function 'virtual void LAMMPS_NS::FixNEB::min_post_force(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_neb.cpp:616:45: warning: 'lenuntilIm' may be used uninitialized in this function [-Wmaybe-uninitialized] prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_neb.cpp:616:45: warning: 'idealPos' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_neb.cpp:616:58: warning: 'meanDist' may be used uninitialized in this function [-Wmaybe-uninitialized] prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist); ^ [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/prd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/prd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/prd.cpp [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/tad.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/tad.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/tad.cpp [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/temper.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/temper.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/temper.cpp [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/verlet_split.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/verlet_split.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/verlet_split.cpp [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/compute_erotate_rigid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/compute_erotate_rigid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/compute_erotate_rigid.cpp [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/compute_ke_rigid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/compute_ke_rigid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/compute_ke_rigid.cpp [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/compute_rigid_local.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/compute_rigid_local.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/compute_rigid_local.cpp [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_ehex.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_ehex.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_ehex.cpp [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rattle.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rattle.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rattle.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_ehex.cpp: In member function 'virtual void LAMMPS_NS::FixEHEX::init()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_ehex.cpp:203:48: warning: 'id_shake' may be used uninitialized in this function [-Wmaybe-uninitialized] fshake = ((FixShake*) modify->fix[id_shake]); ^ [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::compute_forces_and_torques()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1033:10: warning: unused variable 'dtfm' [-Wunused-variable] double dtfm; ^ [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh.cpp: In member function 'virtual void LAMMPS_NS::FixRigidNH::final_integrate()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh.cpp:594:7: warning: unused variable 'i' [-Wunused-variable] int i,ibody; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh.cpp:596:15: warning: unused variable 'xy' [-Wunused-variable] double dtfm,xy,xz,yz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh.cpp:596:18: warning: unused variable 'xz' [-Wunused-variable] double dtfm,xy,xz,yz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh.cpp:596:21: warning: unused variable 'yz' [-Wunused-variable] double dtfm,xy,xz,yz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp: In constructor 'LAMMPS_NS::FixRigid::FixRigid(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:580:51: warning: 'seed' may be used uninitialized in this function [-Wmaybe-uninitialized] if (langflag) random = new RanMars(lmp,seed + me); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:397:30: warning: 'zflag' may be used uninitialized in this function [-Wmaybe-uninitialized] tflag[m-1][2] = zflag; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:396:30: warning: 'yflag' may be used uninitialized in this function [-Wmaybe-uninitialized] tflag[m-1][1] = yflag; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:395:30: warning: 'xflag' may be used uninitialized in this function [-Wmaybe-uninitialized] tflag[m-1][0] = xflag; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:359:34: warning: 'zflag' may be used uninitialized in this function [-Wmaybe-uninitialized] if (domain->dimension == 2 && zflag == 1.0) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:365:30: warning: 'yflag' may be used uninitialized in this function [-Wmaybe-uninitialized] fflag[m-1][1] = yflag; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:364:30: warning: 'xflag' may be used uninitialized in this function [-Wmaybe-uninitialized] fflag[m-1][0] = xflag; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:225:32: warning: 'molecule' may be used uninitialized in this function [-Wmaybe-uninitialized] if (custom_flag) delete [] molecule; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::set_xv()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1484:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1479:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1463:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1407:50: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized] x[i][1] += xcm[ibody][1] - ybox*yprd - zbox*yz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1406:60: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized] x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1406:50: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized] x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::set_v()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1629:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1616:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1578:40: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized] x1 = x[i][1] + ybox*yprd + zbox*yz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1577:50: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized] x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1577:40: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized] x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz; ^ [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh_small.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh_small.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh_small.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::setup_bodies_dynamic()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:2225:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] radone = lbonus[line[i]].length; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::readfile(int, double*, double**, double**, double**, LAMMPS_NS::imageint*, int*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:2298:67: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized] eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::setup_bodies_static()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:2124:31: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized] if (infile && inbody[ibody]) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:2105:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:2022:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] orient[i][0] = lbonus[line[i]].theta - theta_body; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:2087:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh_small.cpp: In member function 'virtual void LAMMPS_NS::FixRigidNHSmall::final_integrate()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh_small.cpp:621:7: warning: unused variable 'i' [-Wunused-variable] int i,ibody; ^ [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nph.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nph.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nph.cpp [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nph_small.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nph_small.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nph_small.cpp [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_npt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_npt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_npt.cpp [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_npt_small.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_npt_small.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_npt_small.cpp [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nve.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nve.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nve.cpp [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nve_small.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nve_small.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nve_small.cpp [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nvt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nvt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nvt.cpp [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nvt_small.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nvt_small.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nvt_small.cpp [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_shake.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_shake.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_shake.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp: In member function 'virtual void LAMMPS_NS::FixRigidSmall::write_restart_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:2702:26: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized] if (me == 0) fclose(fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::set_xv()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:1364:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:1359:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:1344:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::set_v()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:1502:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:1489:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::setup_bodies_dynamic()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:2422:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] radone = lbonus[line[i]].length; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp: In constructor 'LAMMPS_NS::FixRigidSmall::FixRigidSmall(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:496:57: warning: 'seed' may be used uninitialized in this function [-Wmaybe-uninitialized] if (langflag) random = new RanMars(lmp,seed + comm->me); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::readfile(int, double**, int*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:2508:67: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized] eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::setup_bodies_static()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:2306:31: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized] if (infile && inbody[ibody]) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:2284:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:2199:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] orient[i][0] = lbonus[line[i]].theta - theta_body; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:2266:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_append_atoms.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_append_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_append_atoms.cpp [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_msst.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_msst.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_msst.cpp [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_nphug.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_nphug.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_nphug.cpp [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_wall_piston.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_wall_piston.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_wall_piston.cpp [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/compute_sna_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/compute_sna_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/compute_sna_atom.cpp [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/compute_snad_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/compute_snad_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/compute_snad_atom.cpp [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/compute_snav_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/compute_snav_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/compute_snav_atom.cpp [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/pair_snap.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/pair_snap.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/pair_snap.cpp [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/sna.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/sna.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/sna.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/pair_snap.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/pair_snap.cpp:478:9: warning: 'ielem' may be used uninitialized in this function [-Wmaybe-uninitialized] int ielem; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/pair_snap.cpp:725:53: warning: 'starttime' may be used uninitialized in this function [-Wmaybe-uninitialized] if (time_guided) schedule_time_guided = endtime - starttime; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/pair_snap.cpp:523:12: note: 'starttime' was declared here double starttime, endtime; ^ [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp [ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_wall_srd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_wall_srd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_wall_srd.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_wall_srd.cpp: In constructor 'LAMMPS_NS::FixWallSRD::FixWallSRD(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_wall_srd.cpp:67:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized] wallwhich[nwall] = newwall; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::big_static()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:2966:25: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] c1 = tbonus[tri[i]].c1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:2954:30: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] length = lbonus[line[i]].length; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:2938:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ [ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_invoke.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_invoke.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_invoke.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::big_dynamic()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:3049:30: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertia = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:3036:40: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] biglist[k].theta = lbonus[line[i]].theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:3024:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::reset_velocities()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1017:33: warning: 'dof_tstat' may be used uninitialized in this function [-Wmaybe-uninitialized] tbin = vbin[i].value[0]/(n-dof_tstat) * tfactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::parameterize()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:2683:37: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] double *c1 = tbonus[tri[i]].c1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:2703:41: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] double length = lbonus[line[i]].length; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:2700:46: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] double *shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::end_of_step()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_invoke.cpp:91:14: warning: unused variable 'result' [-Wunused-variable] PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::post_force(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_invoke.cpp:108:14: warning: unused variable 'result' [-Wunused-variable] PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist); ^ [ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::collisions_multi()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1548:33: warning: 'xbcollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] xbcoll[2] = xbcollfirst[2]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1547:33: warning: 'xbcollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] xbcoll[1] = xbcollfirst[1]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1546:33: warning: 'xbcollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] xbcoll[0] = xbcollfirst[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1545:33: warning: 'xscollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] xscoll[2] = xscollfirst[2]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1544:33: warning: 'xscollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] xscoll[1] = xscollfirst[1]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1543:33: warning: 'xscollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] xscoll[0] = xscollfirst[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1551:29: warning: 'normfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] norm[2] = normfirst[2]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1550:29: warning: 'normfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] norm[1] = normfirst[1]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1549:29: warning: 'normfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] norm[0] = normfirst[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1576:32: warning: 'typefirst' may be used uninitialized in this function [-Wmaybe-uninitialized] if (collidestyle == SLIP && type == SPHERE) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1581:33: warning: 'jfirst' may be used uninitialized in this function [-Wmaybe-uninitialized] force_wall(v[i],vsnew,j); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::init()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp:146:14: warning: unused variable 'result' [-Wunused-variable] PyObject * result = PyEval_CallObject(py_init, NULL); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp:164:14: warning: unused variable 'result' [-Wunused-variable] PyObject * result = PyEval_CallObject(py_initial_integrate, arglist); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp:182:14: warning: unused variable 'result' [-Wunused-variable] PyObject * result = PyEval_CallObject(py_final_integrate, NULL); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate_respa(int, int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp:200:14: warning: unused variable 'result' [-Wunused-variable] PyObject * result = PyEval_CallObject(py_initial_integrate_respa, arglist); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate_respa(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp:219:14: warning: unused variable 'result' [-Wunused-variable] PyObject * result = PyEval_CallObject(py_final_integrate_respa, arglist); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::reset_dt()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp:237:14: warning: unused variable 'result' [-Wunused-variable] PyObject * result = PyEval_CallObject(py_reset_dt, NULL); ^ [ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/pair_python.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/pair_python.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/pair_python.cpp [ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/python_impl.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/python_impl.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/python_impl.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/python_impl.cpp: In member function 'int LAMMPS_NS::PythonImpl::create_entry(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/python_impl.cpp:410:47: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] else if (format && strlen(format) != ninput+noutput) ^ [ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/dump_atom_mpiio.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/dump_atom_mpiio.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/dump_atom_mpiio.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/python_impl.cpp: In member function 'virtual void LAMMPS_NS::PythonImpl::invoke_function(int, char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/python_impl.cpp:320:36: warning: 'pValue' may be used uninitialized in this function [-Wmaybe-uninitialized] PyTuple_SetItem(pArgs,i,pValue); ^ [ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/dump_cfg_mpiio.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/dump_cfg_mpiio.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/dump_cfg_mpiio.cpp [ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/dump_custom_mpiio.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/dump_custom_mpiio.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/dump_custom_mpiio.cpp [ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/dump_xyz_mpiio.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/dump_xyz_mpiio.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/dump_xyz_mpiio.cpp [ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/restart_mpiio.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/restart_mpiio.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO/restart_mpiio.cpp [ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI/compute_voronoi_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI/compute_voronoi_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI/compute_voronoi_atom.cpp [ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC/fix_atc.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC/fix_atc.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC/fix_atc.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI/compute_voronoi_atom.cpp: In member function 'void LAMMPS_NS::ComputeVoronoi::processCell(voro::voronoicell_neighbor&, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI/compute_voronoi_atom.cpp:515:30: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (j=0; j = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:497:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:492:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:476:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ [ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nve_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nve_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nve_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:497:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:492:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:476:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:497:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:492:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:476:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:497:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:492:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:476:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:674:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:661:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:674:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:661:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:674:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:661:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nvt_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nvt_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nvt_omp.cpp [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_nphug_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_nphug_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_nphug_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:438:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:433:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:418:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_class2_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_class2_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:438:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:433:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:418:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:438:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:433:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:418:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:438:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:433:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:418:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:612:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:599:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:612:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:599:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:612:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:599:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp:239:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized] pd = -pd; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp:238:7: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized] p = 2.0 - p; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp:239:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized] pd = -pd; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp:238:7: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized] p = 2.0 - p; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_BOND = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp:239:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized] pd = -pd; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_BOND = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp:239:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_BOND = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp:239:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_BOND = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp:239:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_harmonic_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_harmonic_omp.cpp [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_umbrella_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_umbrella_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_umbrella_omp.cpp [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/respa_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/respa_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/respa_omp.cpp [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/ewald_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/ewald_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/ewald_omp.cpp [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/msm_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/msm_omp.cpp [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/msm_cg_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/msm_cg_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/msm_cg_omp.cpp [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_omp.cpp [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_cg_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_cg_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_cg_omp.cpp [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_disp_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_disp_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_disp_omp.cpp [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_disp_tip4p_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_disp_tip4p_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_disp_tip4p_omp.cpp [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_tip4p_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_tip4p_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_tip4p_omp.cpp [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp:113:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp:49:43: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp:114:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp:50:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp:113:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp:49:38: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_atomonly_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_atomonly_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_atomonly_omp.cpp [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp:119:67: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp:51:43: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp:120:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp:52:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp:119:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp:51:38: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp:121:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp:50:46: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp:122:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp:51:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp:121:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp:50:41: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom; ^ [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp:113:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp:51:36: note: 'iatom' was declared here int i,j,n,itype,jtype,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp:114:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp:52:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp:113:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp:51:31: note: 'imol' was declared here int i,j,n,itype,jtype,which,imol,iatom; ^ [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:113:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:51:36: note: 'iatom' was declared here int i,j,n,itype,jtype,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:114:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:52:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:113:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:51:31: note: 'imol' was declared here int i,j,n,itype,jtype,which,imol,iatom; ^ [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:117:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:50:43: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:118:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:51:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:117:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:50:38: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:126:67: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:54:43: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:127:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:55:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:126:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:54:38: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp:150:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp:50:43: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp:120:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp:51:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp:150:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp:50:38: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:123:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:49:43: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:124:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:50:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:123:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:49:38: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:124:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:51:46: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:125:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:52:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:124:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:51:41: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom; ^ [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp:157:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp:50:46: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp:121:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp:51:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp:157:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp:50:41: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom; ^ [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:133:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:51:46: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:134:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:52:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:133:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:51:41: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom; ^ [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:113:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:52:36: note: 'iatom' was declared here int i,j,n,itype,jtype,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:114:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:53:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:113:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:52:31: note: 'imol' was declared here int i,j,n,itype,jtype,which,imol,iatom; ^ [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:121:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:55:36: note: 'iatom' was declared here int i,j,n,itype,jtype,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:122:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:56:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:121:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:55:31: note: 'imol' was declared here int i,j,n,itype,jtype,which,imol,iatom; ^ [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp:131:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp:51:46: note: 'iatom' was declared here int i,j,n,itype,jtype,itag,jtag,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp:132:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp:52:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp:131:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp:51:41: note: 'imol' was declared here int i,j,n,itype,jtype,itag,jtag,which,imol,iatom; ^ [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:148:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:54: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:149:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:56:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:148:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:49: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:166:55: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] if (which == 0) neighptr_middle[n_middle++] = j; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:40: note: 'n_middle' was declared here int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:191:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:58:34: note: 'neighptr_middle' was declared here int *neighptr,*neighptr_inner,*neighptr_middle; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:17: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] index += n; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:95:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:192:36: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] numneigh_middle[i] = n_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:82:22: note: 'numneigh_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:191:45: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:82:40: note: 'firstneigh_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:190:26: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] ilist_middle[i] = i; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:82:8: note: 'ilist_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:194:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:54: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:151:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:55:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:194:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:49: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:167:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] if (which == 0) neighptr_middle[n_middle++] = j; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:40: note: 'n_middle' was declared here int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:237:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:57:34: note: 'neighptr_middle' was declared here int *neighptr,*neighptr_inner,*neighptr_middle; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:17: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] index += n; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:94:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:238:36: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] numneigh_middle[i] = n_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:81:22: note: 'numneigh_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:237:45: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:81:40: note: 'firstneigh_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:236:26: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] ilist_middle[i] = i; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:81:8: note: 'ilist_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:155:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:54: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:156:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:55:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:155:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:49: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:173:55: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] if (which == 0) neighptr_middle[n_middle++] = j; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:40: note: 'n_middle' was declared here int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:198:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:57:34: note: 'neighptr_middle' was declared here int *neighptr,*neighptr_inner,*neighptr_middle; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:17: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] errorflag = 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:94:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:145:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:47: note: 'iatom' was declared here int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:146:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:57:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:145:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:42: note: 'imol' was declared here int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:161:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] if (which == 0) neighptr_middle[n_middle++] = j; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:33: note: 'n_middle' was declared here int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:185:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:59:34: note: 'neighptr_middle' was declared here int *neighptr,*neighptr_inner,*neighptr_middle; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:17: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] index += n; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:98:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:186:36: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] numneigh_middle[i] = n_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:85:22: note: 'numneigh_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:185:45: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:85:40: note: 'firstneigh_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:184:26: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] ilist_middle[i] = i; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:85:8: note: 'ilist_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:163:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:57: note: 'iatom' was declared here int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:164:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:58:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:163:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:52: note: 'imol' was declared here int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:180:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] if (which == 0) neighptr_middle[n_middle++] = j; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:43: note: 'n_middle' was declared here int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:204:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:60:34: note: 'neighptr_middle' was declared here int *neighptr,*neighptr_inner,*neighptr_middle; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:17: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] index += n; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:99:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:205:36: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] numneigh_middle[i] = n_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:86:22: note: 'numneigh_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:204:45: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:86:40: note: 'firstneigh_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:203:26: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] ilist_middle[i] = i; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:86:8: note: 'ilist_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_bin_newton_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_bin_newton_omp.cpp [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_nsq_newtoff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_nsq_newtoff_omp.cpp [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_nsq_newton_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_nsq_newton_omp.cpp [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_halffull_newtoff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_halffull_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_halffull_newtoff_omp.cpp [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_halffull_newton_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_halffull_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_halffull_newton_omp.cpp [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_beck_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_beck_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_beck_omp.cpp [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_omp.cpp [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp:182:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp:179:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp:182:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp:182:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp:179:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp:182:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv + ^ [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_cut_omp.cpp [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_cut_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_cut_omp.cpp:157:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_cut_omp.cpp:157:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_cut_omp.cpp:157:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_cut_omp.cpp:157:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_debye_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_debye_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_debye_omp.cpp [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_dsf_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_dsf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_dsf_omp.cpp [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_wolf_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_wolf_omp.cpp [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_dpd_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_dpd_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_dpd_omp.cpp [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_dpd_tstat_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_dpd_tstat_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_dpd_tstat_omp.cpp [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gauss_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gauss_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gauss_omp.cpp [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj96_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj96_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj96_cut_omp.cpp [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cubic_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cubic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cubic_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cubic_omp.cpp: In member function 'void LAMMPS_NS::PairLJCubicOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cubic_omp.cpp:149:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = epsilon[itype][jtype]* ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cubic_omp.cpp:147:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cubic_omp.cpp: In member function 'void LAMMPS_NS::PairLJCubicOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cubic_omp.cpp:149:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = epsilon[itype][jtype]* ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cubic_omp.cpp:147:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]); ^ [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_omp.cpp [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:159:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:156:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = factor_coul * qqrd2e * qtmp*q[j]*rinv; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:159:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:156:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = factor_coul * qqrd2e * qtmp*q[j]*rinv; ^ [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:159:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:159:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:162:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:159:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:159:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:162:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:182:13: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:183:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:176:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:182:13: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:182:13: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:183:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:176:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:182:13: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_expand_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_expand_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_expand_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:182:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:182:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_omp.cpp [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_omp.cpp:148:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_omp.cpp:148:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsCoulGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp:182:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsCoulGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp:182:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_linear_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_linear_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_linear_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp: In member function 'void LAMMPS_NS::PairLJSmoothOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp:152:13: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp:152:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp:149:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp: In member function 'void LAMMPS_NS::PairLJSmoothOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp:152:13: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp:152:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp:149:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - ^ [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_morse_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_morse_omp.cpp [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_soft_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_soft_omp.cpp [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_ufm_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_ufm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_ufm_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp: In member function 'void LAMMPS_NS::PairTableOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp:189:13: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a * tb->e[itable] + b * tb->e[itable+1] + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp:189:13: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp:187:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = tb->e[itable] + fraction*tb->de[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp: In member function 'void LAMMPS_NS::PairTableOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp:189:13: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a * tb->e[itable] + b * tb->e[itable+1] + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp:189:13: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp:187:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = tb->e[itable] + fraction*tb->de[itable]; ^ [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_yukawa_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_yukawa_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_yukawa_omp.cpp [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_zbl_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_zbl_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_zbl_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_zbl_omp.cpp: In member function 'void LAMMPS_NS::PairZBLOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_zbl_omp.cpp:148:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] eswitch = t*t*t * ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_zbl_omp.cpp: In member function 'void LAMMPS_NS::PairZBLOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_zbl_omp.cpp:148:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gayberne_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gayberne_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gayberne_omp.cpp [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_resquared_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_resquared_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_resquared_omp.cpp [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_omp.cpp [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:161:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:161:13: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:161:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:161:13: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_brownian_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_brownian_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_brownian_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:172:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:173:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:177:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:177:13: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:172:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:173:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:177:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:177:13: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_brownian_poly_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_brownian_poly_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_brownian_poly_omp.cpp [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lubricate_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lubricate_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lubricate_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp:213:19: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG) ev_tally_thr(this, i,j,nlocal,NEWTON_PAIR, ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp:206:7: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] fztmp += delz*fpair; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp:213:19: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG) ev_tally_thr(this, i,j,nlocal,NEWTON_PAIR, ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp:206:7: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] fztmp += delz*fpair; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp:206:7: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp:206:7: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lubricate_poly_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lubricate_poly_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lubricate_poly_omp.cpp [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_yukawa_colloid_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_yukawa_colloid_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_yukawa_colloid_omp.cpp [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gran_hertz_history_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gran_hertz_history_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gran_hertz_history_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:256:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += qtmp*r3inv*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += -q[j]*r3inv*pidotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:15: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:15: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:256:15: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += qtmp*r3inv*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:261:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:256:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += qtmp*r3inv*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += -q[j]*r3inv*pidotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:15: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:15: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:256:15: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += qtmp*r3inv*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:261:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gran_hooke_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gran_hooke_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gran_hooke_omp.cpp [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gran_hooke_history_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gran_hooke_history_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gran_hooke_history_omp.cpp [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp:171:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp:172:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp:175:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp:171:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp:172:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp:175:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp:167:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp:166:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp:170:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp:170:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp:171:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp:172:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp:175:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp:167:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp:166:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp:170:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp:170:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp:171:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp:172:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp:175:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_long_coul_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_long_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_long_coul_long_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp:167:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp:166:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp:170:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp:170:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp:167:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp:166:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp:170:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp:170:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp:176:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp:181:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp:178:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp:178:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp:176:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp:181:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp:178:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp:178:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp:176:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp:171:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp:173:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp:173:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp:176:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp:171:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp:173:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp:173:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:193:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:197:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:190:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:190:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:193:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:197:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:190:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:190:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:188:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:192:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:185:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:185:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:188:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:192:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:185:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:185:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:456:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:464:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:462:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:467:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:464:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:470:23: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:464:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:462:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:467:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:464:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:456:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:470:23: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 0; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 1; int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:456:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 1; int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:470:23: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 1; int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:456:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 1; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:470:23: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 0; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_coul_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_coul_long_omp.cpp [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_inner(int, int, LAMMPS_NS::ThrData*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1337:28: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1333:28: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1306:28: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1302:28: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_middle(int, int, LAMMPS_NS::ThrData*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1599:28: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1595:28: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1568:28: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1564:28: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1080:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1080:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1080:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 0; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:416:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:412:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1080:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 1; int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:441:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:439:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:444:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:441:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 1; int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:441:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:439:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:444:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:441:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 1; int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 1; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 0; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:416:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:412:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_adp_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_adp_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_adp_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp: In member function 'void LAMMPS_NS::PairAIREBOOMP::TORSION_thr(int, int, int, int, double*, LAMMPS_NS::ThrData*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:1001:77: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] ev_tally4_thr(this,i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl,thr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1080:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1080:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp: In member function 'void LAMMPS_NS::PairAIREBOOMP::FLJ_thr(int, int, int, int, int, double*, LAMMPS_NS::ThrData*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:571:21: warning: 'dwij' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair = dC*dwij / rij; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:615:32: warning: 'dwmjS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair3 = dC*wikS*wkmS*dwmjS / rmjS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:610:33: warning: 'wmjS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair2 = dC*wikS*dwkmS*wmjS / rkmS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:610:27: warning: 'dwkmS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair2 = dC*wikS*dwkmS*wmjS / rkmS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:615:27: warning: 'wkmS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair3 = dC*wikS*wkmS*dwmjS / rmjS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:586:27: warning: 'dwkjS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair2 = dC*wikS*dwkjS / rkjS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:582:28: warning: 'wkjS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair1 = dC*dwikS*wkjS / rikS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:605:22: warning: 'dwikS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair1 = dC*dwikS*wkmS*wmjS / rikS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:610:22: warning: 'wikS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair2 = dC*wikS*dwkmS*wmjS / rkmS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:615:45: warning: 'rmjS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair3 = dC*wikS*wkmS*dwmjS / rmjS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:610:45: warning: 'rkmS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair2 = dC*wikS*dwkmS*wmjS / rkmS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:586:40: warning: 'rkjS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair2 = dC*wikS*dwkjS / rkjS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:605:45: warning: 'rikS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair1 = dC*dwikS*wkmS*wmjS / rikS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:641:84: warning: 'atomm' may be used uninitialized in this function [-Wmaybe-uninitialized] v_tally4_thr(atomi,atomj,atomk,atomm,fi,fj,fk,delimS,deljmS,delkmS,thr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:641:84: warning: 'atomk' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_morse_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_morse_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_comb_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_comb_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_comb_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1080:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1080:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloyOMP::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp:139:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp:167:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp:187:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp:200:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized] if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]); ^ [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFSOMP::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp:139:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp:167:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp:189:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp:205:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized] if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]); ^ [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eim_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eim_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eim_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nb3b_harmonic_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nb3b_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nb3b_harmonic_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_rebo_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_rebo_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_rebo_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_sw_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_sw_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_sw_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_mod_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_mod_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_mod_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_mod_c_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_mod_c_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_mod_c_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_zbl_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_zbl_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_zbl_omp.cpp [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_vashishta_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_vashishta_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_vashishta_omp.cpp [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_vashishta_table_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_vashishta_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_vashishta_table_omp.cpp [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nm_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nm_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nm_cut_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] else k = atom->map(klist[kk]+tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] else k = atom->map(klist[kk]+tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulCharmmOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp:182:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulCharmmOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp:182:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:422:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:346:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:342:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:422:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:346:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:342:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:422:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:346:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:342:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:422:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:346:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:342:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:405:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:401:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:346:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:342:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:393:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:317:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:313:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:393:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:317:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:313:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:393:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:317:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:313:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:393:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:317:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:313:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:376:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:372:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:317:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:313:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_peri_lps_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_peri_lps_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_peri_lps_omp.cpp [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_peri_pmb_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_peri_pmb_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_peri_pmb_omp.cpp [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_nh_asphere_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_nh_asphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_nh_asphere_omp.cpp [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_opt.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:779:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:774:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:758:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:779:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:774:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:758:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:779:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:774:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:758:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:779:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:774:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:758:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_morse_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_morse_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_morse_opt.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:956:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:943:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:956:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:943:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:956:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:943:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_ufm_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_ufm_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_ufm_opt.cpp [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp:207:17: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp:207:17: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp:209:17: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp:209:40: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp:207:17: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp:207:17: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp:209:17: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp:209:40: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:176:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:181:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:185:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:176:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:181:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:185:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:176:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:181:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:185:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:178:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:178:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:176:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:181:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:185:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:178:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:178:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_long_coul_long_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_long_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_long_coul_long_opt.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 1; int = 1; int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 1; int = 1; int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 1; int = 1; int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 1; int = 1; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 1; int = 0; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:410:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:406:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 0; int = 1; int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:435:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:433:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:438:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:435:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 0; int = 1; int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:435:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:433:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:438:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:435:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 0; int = 1; int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 0; int = 1; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 0; int = 0; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:410:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:406:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_eam_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_eam_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_eam_opt.cpp [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_eam_alloy_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_eam_alloy_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_eam_alloy_opt.cpp [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_eam_fs_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_eam_fs_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_eam_fs_opt.cpp [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/fix_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/fix_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/fix_gpu.cpp [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pppm_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pppm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pppm_gpu.cpp [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_beck_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_beck_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_beck_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_beck_gpu.cpp: In member function 'void LAMMPS_NS::PairBeckGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_beck_gpu.cpp:240:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_gpu.cpp: In member function 'void LAMMPS_NS::PairBornGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_gpu.cpp:242:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_gpu.cpp:282:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_gpu.cpp:279:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_gpu.cpp:279:72: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_gpu.cpp:283:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] d[itype][jtype]*r6inv*r2inv - offset[itype][jtype]; ^ [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_gpu.cpp:238:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_cut_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_cut_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_cut_gpu.cpp:250:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_cut_gpu.cpp:250:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_cut_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_cut_gpu.cpp [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_debye_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_debye_gpu.cpp [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_dsf_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_dsf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_dsf_gpu.cpp [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_dpd_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_dpd_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_dpd_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_dpd_gpu.cpp: In member function 'void LAMMPS_NS::PairDPDGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_dpd_gpu.cpp:406:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_dpd_tstat_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_dpd_tstat_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_dpd_tstat_gpu.cpp [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gauss_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gauss_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gauss_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gauss_gpu.cpp: In member function 'void LAMMPS_NS::PairGaussGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gauss_gpu.cpp:231:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj96_cut_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj96_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj96_cut_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj96_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJ96CutGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj96_cut_gpu.cpp:226:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cubic_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cubic_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cubic_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cubic_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCubicGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cubic_gpu.cpp:234:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] (PHIS + DPHIDS*t - A3*t*t*t/6.0); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cubic_gpu.cpp:231:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cubic_gpu.cpp:238:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_gpu.cpp:237:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp:249:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:283:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:284:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:270:28: warning: 'forcecoul' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair = (forcecoul + factor_lj*forcelj) * r2inv; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:277:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:283:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:253:72: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:253:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:256:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_expand_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_expand_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_expand_gpu.cpp [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_gromacs_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_gromacs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_gromacs_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_expand_gpu.cpp: In member function 'void LAMMPS_NS::PairLJExpandGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_expand_gpu.cpp:239:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_mie_cut_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_mie_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_mie_cut_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_gromacs_gpu.cpp: In member function 'void LAMMPS_NS::PairLJGromacsGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_gromacs_gpu.cpp:236:71: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_gromacs_gpu.cpp:242:74: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_morse_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_morse_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_morse_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_mie_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairMIECutGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_mie_cut_gpu.cpp:226:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_soft_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_soft_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_soft_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_morse_gpu.cpp: In member function 'void LAMMPS_NS::PairMorseGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_morse_gpu.cpp:222:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_table_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_table_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_table_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_soft_gpu.cpp: In member function 'void LAMMPS_NS::PairSoftGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_soft_gpu.cpp:233:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_ufm_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_ufm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_ufm_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_table_gpu.cpp: In member function 'void LAMMPS_NS::PairTableGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_table_gpu.cpp:334:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized] ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_table_gpu.cpp:334:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized] ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_table_gpu.cpp:331:45: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = tb->e[itable] + fraction*tb->de[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_table_gpu.cpp:339:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_ufm_gpu.cpp: In member function 'void LAMMPS_NS::PairUFMGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_ufm_gpu.cpp:236:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_gpu.cpp [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_zbl_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_zbl_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_zbl_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_gpu.cpp: In member function 'void LAMMPS_NS::PairYukawaGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_gpu.cpp:225:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_zbl_gpu.cpp: In member function 'void LAMMPS_NS::PairZBLGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_zbl_gpu.cpp:233:59: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] (sw3[itype][jtype] + sw4[itype][jtype]*t); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_zbl_gpu.cpp:238:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gayberne_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gayberne_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gayberne_gpu.cpp [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_resquared_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_resquared_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_resquared_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_resquared_gpu.cpp: In member function 'void LAMMPS_NS::PairRESquaredGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_resquared_gpu.cpp:310:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized] if (eflag) evdwl = factor_lj*one_eng; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_resquared_gpu.cpp:313:73: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] fforce[2],-r12[0],-r12[1],-r12[2]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gayberne_gpu.cpp: In member function 'void LAMMPS_NS::PairGayBerneGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gayberne_gpu.cpp:335:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized] if (eflag) evdwl = factor_lj*one_eng; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gayberne_gpu.cpp:338:63: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] -r12[0],-r12[1],-r12[2]); ^ [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_gpu.cpp [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_gpu.cpp: In member function 'void LAMMPS_NS::PairLJClass2GPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_gpu.cpp:223:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_colloid_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_colloid_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp:273:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp:274:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp:277:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp:277:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_colloid_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_colloid_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_colloid_gpu.cpp: In member function 'void LAMMPS_NS::PairColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_colloid_gpu.cpp:302:22: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] f[i][2] += delz*fpair; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_colloid_gpu.cpp:298:36: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (eflag) evdwl *= factor_lj; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_colloid_gpu.cpp: In member function 'void LAMMPS_NS::PairYukawaColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_colloid_gpu.cpp:236:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:219:34: warning: variable 'tjxcoul' set but not used [-Wunused-but-set-variable] double tixcoul,tiycoul,tizcoul,tjxcoul,tjycoul,tjzcoul; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:355:34: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += qtmp*r3inv*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:353:35: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += -q[j]*r3inv*pidotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:351:29: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:351:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:355:28: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += qtmp*r3inv*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:360:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:419:70: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:419:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:419:54: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:416:47: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:416:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:416:31: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:419:70: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:419:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:419:54: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:424:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_gpu.cpp [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_long_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_long_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_gpu.cpp:283:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_gpu.cpp:284:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_gpu.cpp:288:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_gpu.cpp:287:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_long_gpu.cpp:275:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_long_gpu.cpp:276:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_long_gpu.cpp:280:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_long_gpu.cpp:280:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongGPU::init_style()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp:151:16: warning: unused variable 'cut' [-Wunused-variable] double cut = init_one(i,j); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongGPU::init_style()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:154:10: warning: variable 'cut' set but not used [-Wunused-but-set-variable] double cut; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp:282:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp:287:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp:284:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp:284:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:319:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:324:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:328:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:321:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:321:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:328:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:306:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:311:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:315:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:308:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:308:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:283:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:278:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:287:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:280:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:70: warning: 'ecoul' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,ecoul,fpair,delx,dely,delz); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:70: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:280:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloyGPU::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp:377:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp:378:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp:379:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp:380:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp:405:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp:425:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp:432:55: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized] if (me == 0) grab(fptr,file->nr,&file->rhor[i][1]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFSGPU::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp:377:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp:378:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp:379:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp:380:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp:405:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp:427:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_sw_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_sw_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_sw_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp:443:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized] if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]); ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_tersoff_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_tersoff_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_tersoff_gpu.cpp [100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_tersoff_mod_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_tersoff_mod_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_tersoff_mod_gpu.cpp [100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_tersoff_zbl_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_tersoff_zbl_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_tersoff_zbl_gpu.cpp [100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_vashishta_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_vashishta_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_vashishta_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_vashishta_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairVashishtaGPU::init_style()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_vashishta_gpu.cpp:154:24: warning: unused variable 'r0eps' [-Wunused-variable] double *cutsq, *r0, *r0eps, *gamma, *eta; ^ [100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_cs_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_cs_gpu.cpp [100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_cs_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_cs_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:285:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:282:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:282:72: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:286:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] d[itype][jtype]*r6inv*r2inv - offset[itype][jtype]; ^ [100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_cs_gpu.cpp:326:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_cs_gpu.cpp:327:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_cs_gpu.cpp:331:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_cs_gpu.cpp:330:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongCSGPU::init_style()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp:156:16: warning: unused variable 'cut' [-Wunused-variable] double cut = init_one(i,j); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairCoulLongCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp:307:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp:312:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp:309:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp:309:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [100%] Linking CXX shared library liblammps.so /usr/bin/cmake3 -E cmake_link_script CMakeFiles/lammps.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -shared -Wl,-soname,liblammps.so.0 -o liblammps.so.0 @CMakeFiles/lammps.dir/objects1.rsp -Wl,-rpath,/usr/lib64/mpich/lib: /usr/lib64/mpich/lib/libmpichcxx.so /usr/lib64/mpich/lib/libmpich.so /usr/lib64/mpich/lib/libopa.so /usr/lib64/mpich/lib/libmpl.so -lrt -lpthread -lfftw3 -lpython3.4m -ljpeg -lpng -lz -lvoro++ -lm libatc.a libgpu.a -lopenblas -lOpenCL /usr/bin/cmake3 -E cmake_symlink_library liblammps.so.0 liblammps.so.0 liblammps.so make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' [100%] Built target lammps /usr/bin/make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' cd /builddir/build/BUILD/lammps-stable_22Aug2018/mpich && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/mpich /builddir/build/BUILD/lammps-stable_22Aug2018/mpich /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/CMakeFiles/lmp.dir/DependInfo.cmake --color= Scanning dependencies of target lmp make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' /usr/bin/make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' [100%] Building CXX object CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/main.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/usr/include/mpich-x86_64 -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MPIIO -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/mpich/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIE -o CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/main.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/main.cpp [100%] Linking CXX executable lmp /usr/bin/cmake3 -E cmake_link_script CMakeFiles/lmp.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -rdynamic CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/main.cpp.o -o lmp -Wl,-rpath,/builddir/build/BUILD/lammps-stable_22Aug2018/mpich:/usr/lib64/mpich/lib: liblammps.so.0 /usr/lib64/mpich/lib/libmpichcxx.so /usr/lib64/mpich/lib/libmpich.so /usr/lib64/mpich/lib/libopa.so /usr/lib64/mpich/lib/libmpl.so -lrt -lpthread -lfftw3 -lpython3.4m -ljpeg -lpng -lz -lvoro++ -lm libatc.a -lopenblas libgpu.a -lOpenCL make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' [100%] Built target lmp make[1]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' /usr/bin/cmake3 -E cmake_progress_start /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/CMakeFiles 0 + . /etc/profile.d/modules.sh ++++ /bin/ps -p 70 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' mpi/mpich-x86_64 = '' ']' +++ '[' /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core = '' ']' + module unload mpi/mpich-x86_64 ++ /usr/bin/modulecmd sh unload mpi/mpich-x86_64 + eval MANPATH=/usr/share/lmod/lmod/share/man:: ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib64/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;' ++ MANPATH=/usr/share/lmod/lmod/share/man:: ++ export MANPATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ PKG_CONFIG_PATH=/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset LD_LIBRARY_PATH ++ unset LOADEDMODULES ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ unset PYTHONPATH ++ unset _LMFILES_ + cd .. + cd serial + CFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro ' + export LDFLAGS + /usr/bin/cmake3 -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -C ../cmake/presets/std_nolib.cmake -DBUILD_LIB=ON -DLIB_SUFFIX= -DPKG_PYTHON=ON -DPKG_VORONOI=ON -DPKG_USER-ATC=ON -DPKG_USER-OMP=ON -DENABLE_TESTING=ON -DPYTHON_INSTDIR=/usr/lib/python3.4/site-packages -DCMAKE_INSTALL_SYSCONFDIR=/etc -DPKG_GPU=1 -DGPU_API=OpenCL -DFFT=FFTW3 -DBUILD_MPI=OFF ../cmake loading initial cache file ../cmake/presets/std_nolib.cmake -- The CXX compiler identification is GNU 4.8.5 -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Running check for auto-generated files from make-based build system -- The C compiler identification is GNU 4.8.5 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Found OpenMP_C: -fopenmp (found version "3.1") -- Found OpenMP_CXX: -fopenmp (found version "3.1") -- Found OpenMP: TRUE (found version "3.1") -- Found PkgConfig: /usr/bin/pkg-config (found version "0.27.1") -- Checking for module 'fftw3' -- Found fftw3, version 3.3.3 -- Found FFTW3: /usr/lib64/libfftw3.so -- Looking for sgemm_ -- Looking for sgemm_ - found -- Looking for pthread.h -- Looking for pthread.h - found -- Looking for pthread_create -- Looking for pthread_create - found -- Found Threads: TRUE -- Found BLAS: /usr/lib64/libopenblas.so -- Looking for cheev_ -- Looking for cheev_ - found -- A library with LAPACK API found. -- Found PythonInterp: /usr/bin/python (found version "2.7.5") -- Found PythonLibs: /usr/lib64/libpython3.4m.so (found version "3.4.9") -- Found JPEG: /usr/lib64/libjpeg.so (found version "62") -- Found PNG: /usr/lib64/libpng.so (found version "1.5.13") -- Found ZLIB: /usr/lib64/libz.so (found version "1.2.7") -- Found GZIP: /usr/bin/gzip -- Could NOT find FFMPEG (missing: FFMPEG_EXECUTABLE) -- Found VORO: /usr/lib64/libvoro++.so -- Looking for C++ include math.h -- Looking for C++ include math.h - found -- Looking for CL_VERSION_2_2 -- Looking for CL_VERSION_2_2 - found -- Found OpenCL: /usr/lib64/libOpenCL.so (found version "2.2") Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/atom_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/beck_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/born_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/born_coul_long_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/born_coul_long_cs_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/born_coul_wolf_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/born_coul_wolf_cs_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/buck_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/buck_coul_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/buck_coul_long_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/charmm_long_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/colloid_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/coul_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/coul_debye_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/coul_dsf_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/coul_long_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/coul_long_cs_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/device_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/dipole_lj_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/dipole_lj_sf_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/dipole_long_lj_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/dpd_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/eam_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/ellipsoid_nbor_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/gauss_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/lj_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/lj96_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/lj_class2_long_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/lj_coul_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/lj_coul_debye_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/lj_coul_long_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/lj_coul_msm_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/lj_cubic_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/lj_dsf_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/lj_expand_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/lj_expand_coul_long_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/lj_gromacs_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/lj_sdk_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/lj_sdk_long_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/mie_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/morse_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/neighbor_cpu_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/neighbor_gpu_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/pppm_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/re_squared_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/re_squared_lj_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/soft_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/sw_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/table_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/tersoff_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/tersoff_mod_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/tersoff_zbl_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/ufm_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/vashishta_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/yukawa_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/yukawa_colloid_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/zbl_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/gayberne_cl.h... Creating /builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu/gayberne_lj_cl.h... -- Generating style_angle.h... -- Generating style_atom.h... -- Generating style_body.h... -- Generating style_bond.h... -- Generating style_command.h... -- Generating style_compute.h... -- Generating style_dihedral.h... -- Generating style_dump.h... -- Generating style_fix.h... -- Generating style_improper.h... -- Generating style_integrate.h... -- Generating style_kspace.h... -- Generating style_minimize.h... -- Generating style_nbin.h... -- Generating style_npair.h... -- Generating style_nstencil.h... -- Generating style_ntopo.h... -- Generating style_pair.h... -- Generating style_reader.h... -- Generating style_region.h... -- Generating lmpinstalledpkgs.h... -- Building package: ASPHERE -- Building package: BODY -- Building package: CLASS2 -- Building package: COLLOID -- Building package: DIPOLE -- Building package: GRANULAR -- Building package: KSPACE -- Building package: MANYBODY -- Building package: MC -- Building package: MISC -- Building package: MOLECULE -- Building package: PERI -- Building package: REPLICA -- Building package: RIGID -- Building package: SHOCK -- Building package: SNAP -- Building package: SRD -- Building package: PYTHON -- Building package: VORONOI -- Building package: USER-ATC -- Building package: USER-OMP -- Building package: OPT -- Building package: GPU -- The following packages have been found: * OpenMP * PkgConfig * FFTW3 * BLAS * Threads * LAPACK * PythonInterp * PythonLibs * JPEG * PNG * ZLIB * VORO * OpenCL -- <<< Build configuration >>> Build type Install path /usr Compilers and Flags: C++ Compiler /usr/bin/c++ Type GNU Version 4.8.5 C++ Flags -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp Defines LAMMPS_SMALLBIG;LAMMPS_MEMALIGN=64;FFT_FFTW;LMP_PYTHON;LAMMPS_JPEG;LAMMPS_PNG;LAMMPS_GZIP -- C Compiler /usr/bin/cc Type GNU Version 4.8.5 C Flags -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -- Linker flags: Executable -Wl,-z,relro -- Shared libraries -Wl,-z,relro -- Link libraries: mpi_stubs;/usr/lib64/libfftw3.so;/usr/lib64/libpython3.4m.so;/usr/lib64/libjpeg.so;/usr/lib64/libpng.so;/usr/lib64/libz.so;/usr/lib64/libvoro++.so;m;atc;gpu -- GPU Api: OPENCL -- OCL Tune: GENERIC -- GPU Precision: MIXED -- Using FFTW3 as FFT -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_CXX_FLAGS_RELEASE CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE INCLUDE_INSTALL_DIR LIB_INSTALL_DIR SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/lammps-stable_22Aug2018/serial + /usr/bin/make -j2 /usr/bin/cmake3 -H/builddir/build/BUILD/lammps-stable_22Aug2018/cmake -B/builddir/build/BUILD/lammps-stable_22Aug2018/serial --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake3 -E cmake_progress_start /builddir/build/BUILD/lammps-stable_22Aug2018/serial/CMakeFiles /builddir/build/BUILD/lammps-stable_22Aug2018/serial/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[1]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' /usr/bin/make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/depend /usr/bin/make -f CMakeFiles/mpi_stubs.dir/build.make CMakeFiles/mpi_stubs.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' cd /builddir/build/BUILD/lammps-stable_22Aug2018/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/serial /builddir/build/BUILD/lammps-stable_22Aug2018/serial /builddir/build/BUILD/lammps-stable_22Aug2018/serial/CMakeFiles/mpi_stubs.dir/DependInfo.cmake --color= make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' cd /builddir/build/BUILD/lammps-stable_22Aug2018/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/serial /builddir/build/BUILD/lammps-stable_22Aug2018/serial /builddir/build/BUILD/lammps-stable_22Aug2018/serial/CMakeFiles/atc.dir/DependInfo.cmake --color= Scanning dependencies of target mpi_stubs make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' /usr/bin/make -f CMakeFiles/mpi_stubs.dir/build.make CMakeFiles/mpi_stubs.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' [ 0%] Building C object CMakeFiles/mpi_stubs.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS/mpi.c.o /usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/mpi_stubs.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS/mpi.c.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS/mpi.c [ 0%] Linking C static library libmpi_stubs.a /usr/bin/cmake3 -P CMakeFiles/mpi_stubs.dir/cmake_clean_target.cmake /usr/bin/cmake3 -E cmake_link_script CMakeFiles/mpi_stubs.dir/link.txt --verbose=1 /usr/bin/ar qc libmpi_stubs.a CMakeFiles/mpi_stubs.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS/mpi.c.o /usr/bin/ranlib libmpi_stubs.a make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' [ 0%] Built target mpi_stubs /usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' cd /builddir/build/BUILD/lammps-stable_22Aug2018/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/serial /builddir/build/BUILD/lammps-stable_22Aug2018/serial /builddir/build/BUILD/lammps-stable_22Aug2018/serial/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake --color= Scanning dependencies of target ocl_get_devices make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' /usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' [ 0%] Building CXX object CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ucl_get_devices.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DUCL_OPENCL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIE -o CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ucl_get_devices.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ucl_get_devices.cpp Scanning dependencies of target atc make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' /usr/bin/make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' [ 0%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Coupling.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Coupling.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Coupling.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ucl_get_devices.cpp:25:0: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 1%] Linking CXX executable ocl_get_devices /usr/bin/cmake3 -E cmake_link_script CMakeFiles/ocl_get_devices.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -Wl,-z,relro -rdynamic CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ucl_get_devices.cpp.o -o ocl_get_devices -lOpenCL make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' [ 1%] Built target ocl_get_devices /usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' cd /builddir/build/BUILD/lammps-stable_22Aug2018/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/serial /builddir/build/BUILD/lammps-stable_22Aug2018/serial /builddir/build/BUILD/lammps-stable_22Aug2018/serial/CMakeFiles/gpu.dir/DependInfo.cmake --color= Scanning dependencies of target gpu make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' /usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp: In member function 'double LAMMPS_AL::Answer::energy_virial(double*, double**, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp:182:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses] if (_ef_atom) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp:196:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses] if (_vf_atom) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp: In member function 'double LAMMPS_AL::Answer::energy_virial(double*, double**, double*, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp:231:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses] if (_ef_atom) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp:250:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses] if (_vf_atom) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp: In instantiation of 'double LAMMPS_AL::Answer::energy_virial(double*, double**, double*, double&) [with numtyp = float; acctyp = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp:313:16: required from here /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp:224:7: warning: unused variable 'ii' [-Wunused-variable] int ii, vstart=0, iend=_inum; ^ [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.cpp:17: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Coupling.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Coupling.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.cpp:17: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 2%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingEnergy.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingEnergy.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingEnergy.cpp [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dpd.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dpd.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dpd.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dpd.cpp:17: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 2%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMass.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMass.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMass.cpp [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 2%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentum.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentum.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentum.cpp [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Coupling.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentum.h:7, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentum.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 3%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentumEnergy.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentumEnergy.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentumEnergy.cpp [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Coupling.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentumEnergy.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentumEnergy.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_ext.cpp [ 4%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 5%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Transfer.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Transfer.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Transfer.cpp [ 5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Transfer.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Transfer.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 5%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferKernel.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferKernel.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferKernel.cpp [ 5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Transfer.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferKernel.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferKernel.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferPartitionOfUnity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferPartitionOfUnity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferPartitionOfUnity.cpp [ 6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dpd.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dpd.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.cpp: In instantiation of 'void LAMMPS_AL::EAM::loop(bool, bool) [with numtyp = float; acctyp = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.cpp:533:16: required from here /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.cpp:448:14: warning: variable 'vflag' set but not used [-Wunused-but-set-variable] int eflag, vflag; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Transfer.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferPartitionOfUnity.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferPartitionOfUnity.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomToMoleculeTransfer.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomToMoleculeTransfer.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomToMoleculeTransfer.cpp [ 6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_alloy_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_alloy_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_alloy_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_alloy_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_fs_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_fs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_fs_ext.cpp [ 7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_fs_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne.cpp:27: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/BodyForce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/BodyForce.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/BodyForce.cpp [ 8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CBLattice.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CBLattice.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CBLattice.cpp [ 8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CauchyBorn.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CauchyBorn.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CauchyBorn.cpp [ 8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye_ext.cpp [ 9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CbPotential.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CbPotential.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CbPotential.cpp [ 9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ChargeRegulator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ChargeRegulator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ChargeRegulator.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ChargeRegulator.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ChargeRegulator.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ConcentrationRegulator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ConcentrationRegulator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ConcentrationRegulator.cpp [ 9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long_ext.cpp [ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElasticTimeIntegrator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElasticTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElasticTimeIntegrator.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeIntegrator.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElasticTimeIntegrator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElasticTimeIntegrator.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronChargeDensity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronChargeDensity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronChargeDensity.cpp [ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie.cpp [ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronDragPower.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronDragPower.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronDragPower.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse.cpp [ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronFlux.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronFlux.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronFlux.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor.cpp:18: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronHeatCapacity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronHeatCapacity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronHeatCapacity.cpp [ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor_shared.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor_shared.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor_shared.cpp [ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronHeatFlux.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronHeatFlux.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronHeatFlux.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_kernel.h:27:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor_shared.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor_shared.cpp:17: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm.cpp:25: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronPhononExchange.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronPhononExchange.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronPhononExchange.cpp [ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm.h:20, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared.cpp [ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModel.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModel.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModel.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared.cpp:27: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw.cpp [ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelDriftDiffusion.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModel.h:8, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelTwoTemperature.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelDriftDiffusion.h:8, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelDriftDiffusion.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_ext.cpp [ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelElectrostatic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelElectrostatic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelElectrostatic.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm.h:21, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm.cpp:26: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModel.h:8, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelElectrostatic.h:7, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelElectrostatic.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm.h:21, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm_ext.cpp:22: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelTwoTemperature.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelTwoTemperature.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelTwoTemperature.cpp [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModel.h:8, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelTwoTemperature.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelTwoTemperature.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid_ext.cpp [ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Element.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Element.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Element.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_ext.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl.cpp:24: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl_ext.cpp.o /usr/bin/c++ -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/gpu -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl_ext.cpp [ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Engine.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Engine.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Engine.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_timer.h:28:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.h:23, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl.h:19, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl_ext.cpp:20: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable] cl_context_properties props[3]; ^ [ 15%] Linking CXX static library libgpu.a /usr/bin/cmake3 -P CMakeFiles/gpu.dir/cmake_clean_target.cmake /usr/bin/cmake3 -E cmake_link_script CMakeFiles/gpu.dir/link.txt --verbose=1 /usr/bin/ar qc libgpu.a CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_answer.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_atom.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_atomic.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_charge.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dipole.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_dpd.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_ellipsoid.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_base_three.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_beck_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_cs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_coul_wolf_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_born_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_buck_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_charmm_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_colloid_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_debye_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_dsf_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_cs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_device.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_lj_sf_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dipole_long_lj_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_dpd_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_alloy_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_eam_fs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gauss_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_gayberne_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj96_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_class2_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_debye_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_coul_msm_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_cubic_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_dsf_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_expand_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_gromacs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_lj_sdk_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_mie_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_morse_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_neighbor_shared.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_pppm_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_re_squared_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_soft_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_sw_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_table_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_mod_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_tersoff_zbl_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_ufm_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_vashishta_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_colloid_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_yukawa_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/gpu/lal_zbl_ext.cpp.o /usr/bin/ranlib libgpu.a make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' [ 15%] Built target gpu [ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Interpolate.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Interpolate.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Interpolate.cpp [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Mesh.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Mesh.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Mesh.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Engine.h:9, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Engine.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldEulerIntegrator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldEulerIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldEulerIntegrator.cpp [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldManager.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldManager.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldManager.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldEulerIntegrator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldEulerIntegrator.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Function.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Function.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Function.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldManager.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldManager.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FundamentalAtomicQuantity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FundamentalAtomicQuantity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FundamentalAtomicQuantity.cpp [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/GhostManager.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/GhostManager.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/GhostManager.cpp [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ImplicitSolveOperator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ImplicitSolveOperator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ImplicitSolveOperator.cpp [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/InterscaleOperators.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/InterscaleOperators.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/InterscaleOperators.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ImplicitSolveOperator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ImplicitSolveOperator.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KD_Tree.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KD_Tree.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KD_Tree.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixDef.h:23:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Array.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Array2D.h:9, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KD_Tree.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KD_Tree.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function] static std::string to_cap(const std::string &s) { ^ [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KernelFunction.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KernelFunction.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KernelFunction.cpp [ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KinetoThermostat.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KinetoThermostat.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KinetoThermostat.cpp [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Kinetostat.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Kinetostat.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Kinetostat.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KinetoThermostat.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KinetoThermostat.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Kinetostat.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Kinetostat.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.h:25, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LinearSolver.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LinearSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LinearSolver.cpp [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MPI_Wrappers.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MPI_Wrappers.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MPI_Wrappers.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MPI_Wrappers.cpp:2:0: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function] static std::string to_cap(const std::string &s) { ^ [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Material.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Material.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Material.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LinearSolver.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LinearSolver.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Matrix.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Matrix.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Matrix.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixDef.h:23:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Matrix.h:3, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Matrix.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function] static std::string to_cap(const std::string &s) { ^ [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MeshReader.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MeshReader.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MeshReader.cpp [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MoleculeSet.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MoleculeSet.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MoleculeSet.cpp [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/NonLinearSolver.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/NonLinearSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/NonLinearSolver.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/NonLinearSolver.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/NonLinearSolver.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/OutputManager.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/OutputManager.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/OutputManager.cpp [ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PaqAtcUtility.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PaqAtcUtility.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PaqAtcUtility.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/OutputManager.cpp: In member function 'void ATC::OutputManager::read_restart_file(std::string, ATC::RESTART_LIST*)': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/OutputManager.cpp:164:42: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&myVal,sizeof(double),1,fp); ^ [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParDiagonalMatrix.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParDiagonalMatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParDiagonalMatrix.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixDef.h:23:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Matrix.h:3, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/DenseMatrix.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParDiagonalMatrix.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParDiagonalMatrix.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function] static std::string to_cap(const std::string &s) { ^ [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParSparseMatrix.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParSparseMatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParSparseMatrix.cpp [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantityLibrary.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantityLibrary.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantityLibrary.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParSparseMatrix.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParSparseMatrix.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixDef.h:23:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Matrix.h:3, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/DenseMatrix.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParSparseMatrix.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParSparseMatrix.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Utility.h: At global scope: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function] static std::string to_cap(const std::string &s) { ^ [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerPairQuantity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerPairQuantity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerPairQuantity.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.h:25, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerPairQuantity.h:7, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerPairQuantity.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PhysicsModel.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PhysicsModel.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PhysicsModel.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.h:25, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantity.h:7, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantityLibrary.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantityLibrary.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PoissonSolver.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PoissonSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PoissonSolver.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PhysicsModel.h:8, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PhysicsModel.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PolynomialSolver.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PolynomialSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PolynomialSolver.cpp [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PrescribedDataManager.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PrescribedDataManager.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PrescribedDataManager.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LinearSolver.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PoissonSolver.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PoissonSolver.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Quadrature.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Quadrature.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Quadrature.cpp [ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SchrodingerSolver.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SchrodingerSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SchrodingerSolver.cpp [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SpeciesTimeIntegrator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SpeciesTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SpeciesTimeIntegrator.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LinearSolver.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SchrodingerSolver.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SchrodingerSolver.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Stress.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Stress.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Stress.cpp [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ThermalTimeIntegrator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ThermalTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ThermalTimeIntegrator.cpp [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Thermostat.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Thermostat.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Thermostat.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeIntegrator.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ThermalTimeIntegrator.h:5, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ThermalTimeIntegrator.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeFilter.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeFilter.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeFilter.cpp [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeIntegrator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeIntegrator.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Thermostat.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Thermostat.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferLibrary.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferLibrary.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferLibrary.cpp [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferOperator.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferOperator.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferOperator.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.h:25, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantity.h:7, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantityLibrary.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferOperator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferOperator.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Vector.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Vector.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Vector.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixDef.h:23:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Matrix.h:3, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Vector.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/DenseVector.h:4, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Vector.cpp:1: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function] static std::string to_cap(const std::string &s) { ^ [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ViscousStress.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ViscousStress.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ViscousStress.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix.h:297:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MatrixLibrary.h:10, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TypeDefs.h:17, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.h:25, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantity.h:7, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantityLibrary.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferOperator.h:6, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferLibrary.h:11, from /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferLibrary.cpp:2: /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix::compress() [with T = double]': /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD::v' may be used uninitialized in this function [-Wmaybe-uninitialized] val[i] = next.v; ^ [ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationChargeDiffusion.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationChargeDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationChargeDiffusion.cpp [ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationDiffusion.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationDiffusion.cpp [ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronContinuity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronContinuity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronContinuity.cpp [ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronMomentum.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronMomentum.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronMomentum.cpp [ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronTemperature.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronTemperature.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronTemperature.cpp [ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationMassDiffusion.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationMassDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationMassDiffusion.cpp [ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationMomentum.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationMomentum.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationMomentum.cpp [ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationPhononTemperature.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationPhononTemperature.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationPhononTemperature.cpp [ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationPoisson.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationPoisson.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationPoisson.cpp [ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationSchrodinger.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationSchrodinger.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationSchrodinger.cpp [ 20%] Linking CXX static library libatc.a /usr/bin/cmake3 -P CMakeFiles/atc.dir/cmake_clean_target.cmake /usr/bin/cmake3 -E cmake_link_script CMakeFiles/atc.dir/link.txt --verbose=1 /usr/bin/ar qc libatc.a CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Coupling.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingEnergy.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMass.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentum.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_CouplingMomentumEnergy.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Method.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_Transfer.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferKernel.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ATC_TransferPartitionOfUnity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomToMoleculeTransfer.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/AtomicRegulator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/BodyForce.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CBLattice.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CauchyBorn.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/CbPotential.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ChargeRegulator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ConcentrationRegulator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElasticTimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronChargeDensity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronDragPower.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronFlux.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronHeatCapacity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronHeatFlux.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ElectronPhononExchange.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModel.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelElectrostatic.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ExtrinsicModelTwoTemperature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Element.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Engine.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Interpolate.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FE_Mesh.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldEulerIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FieldManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Function.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/FundamentalAtomicQuantity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/GhostManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ImplicitSolveOperator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/InterscaleOperators.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KD_Tree.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KernelFunction.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/KinetoThermostat.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Kinetostat.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LammpsInterface.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/LinearSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MPI_Wrappers.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Material.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Matrix.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MeshReader.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/MoleculeSet.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/NonLinearSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/OutputManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PaqAtcUtility.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParDiagonalMatrix.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ParSparseMatrix.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerAtomQuantityLibrary.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PerPairQuantity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PhysicsModel.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PoissonSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PolynomialSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/PrescribedDataManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Quadrature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SchrodingerSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/SpeciesTimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Stress.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ThermalTimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Thermostat.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeFilter.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferLibrary.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/TransferOperator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/Vector.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/ViscousStress.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationChargeDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronContinuity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronMomentum.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationElectronTemperature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationMassDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationMomentum.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationPhononTemperature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationPoisson.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc/WeakEquationSchrodinger.cpp.o /usr/bin/ranlib libatc.a make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' [ 20%] Built target atc /usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' cd /builddir/build/BUILD/lammps-stable_22Aug2018/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/serial /builddir/build/BUILD/lammps-stable_22Aug2018/serial /builddir/build/BUILD/lammps-stable_22Aug2018/serial/CMakeFiles/lammps.dir/DependInfo.cmake --color= Scanning dependencies of target lammps make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' /usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' [ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/angle.cpp.o [ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_hybrid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/angle.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/angle.cpp /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_hybrid.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_hybrid.cpp: In member function 'virtual void LAMMPS_NS::AngleHybrid::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_hybrid.cpp:338:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nstyles,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_hybrid.cpp:347:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_hybrid.cpp:350:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(keywords[m],sizeof(char),n,fp); ^ [ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_zero.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_zero.cpp [ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_zero.cpp: In member function 'virtual void LAMMPS_NS::AngleZero::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/angle_zero.cpp:133:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&theta0[1],sizeof(double),atom->nangletypes,fp); ^ [ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_map.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_map.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_map.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom.cpp: In member function 'int LAMMPS_NS::Atom::memcheck(const char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom.cpp:2280:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if (strlen(memstr) + n >= memlength) { ^ [ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom.cpp: In member function 'void LAMMPS_NS::Atom::data_atoms(int, char*, LAMMPS_NS::tagint, LAMMPS_NS::tagint, int, int, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom.cpp:938:48: warning: 'iptr' may be used uninitialized in this function [-Wmaybe-uninitialized] imagedata = ((imageint) (atoi(values[iptr]) + IMGMAX) & IMGMASK) | ^ [ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_atomic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_atomic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_atomic.cpp [ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_body.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_body.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_body.cpp [ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_charge.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_charge.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_charge.cpp [ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_ellipsoid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_ellipsoid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_ellipsoid.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_hybrid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_hybrid.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_line.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_line.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_line.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_sphere.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/atom_vec_tri.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/balance.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/balance.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/balance.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/body.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/body.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/body.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/bond.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/bond.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/bond.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_hybrid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_hybrid.cpp [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_zero.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_zero.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_hybrid.cpp: In member function 'virtual void LAMMPS_NS::BondHybrid::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_hybrid.cpp:322:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nstyles,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_hybrid.cpp:331:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_hybrid.cpp:334:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(keywords[m],sizeof(char),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_zero.cpp: In member function 'virtual void LAMMPS_NS::BondZero::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/bond_zero.cpp:131:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[1],sizeof(double),atom->nbondtypes,fp); ^ [ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/change_box.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/change_box.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/change_box.cpp [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/citeme.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/citeme.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/citeme.cpp [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/comm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/comm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/comm.cpp [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_brick.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_brick.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_brick.cpp [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_tiled.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_tiled.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_tiled.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_brick.cpp: In member function 'virtual void LAMMPS_NS::CommBrick::borders()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_brick.cpp:712:28: warning: 'nfirst' may be used uninitialized in this function [-Wmaybe-uninitialized] int nsend,nrecv,sendflag,nfirst,nlast,ngroup; ^ [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_tiled.cpp: In member function 'void LAMMPS_NS::CommTiled::box_drop_brick(int, double*, double*, int&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_tiled.cpp:1500:17: warning: 'dir' may be used uninitialized in this function [-Wmaybe-uninitialized] index += dir; ^ [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_aggregate_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_aggregate_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_aggregate_atom.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_tiled.cpp: In member function 'virtual void LAMMPS_NS::CommTiled::borders()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/comm_tiled.cpp:818:9: warning: 'nlast' may be used uninitialized in this function [-Wmaybe-uninitialized] for (i = atom->nlocal; i < nlast; i++) { ^ [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle.cpp [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle_local.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle_local.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle_local.cpp [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angmom_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angmom_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angmom_chunk.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle_local.cpp: In member function 'int LAMMPS_NS::ComputeAngleLocal::compute_angles(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle_local.cpp:169:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] tagprev = tag[atom2] - iatom - 1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle_local.cpp:167:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] if (tag[atom2] != onemols[imol]->angle_atom2[atom2][i]) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle_local.cpp:208:22: warning: 'ebuf' may be used uninitialized in this function [-Wmaybe-uninitialized] else ebuf[n] = 0.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_angle_local.cpp:202:17: warning: 'tbuf' may be used uninitialized in this function [-Wmaybe-uninitialized] tbuf[n] = 180.0*acos(c)/MY_PI; ^ [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond.cpp [ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_centro_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_centro_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_centro_atom.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp: In member function 'int LAMMPS_NS::ComputeBondLocal::compute_bonds(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp:315:28: warning: 'engrot' may be used uninitialized in this function [-Wmaybe-uninitialized] ptr[n] = engrot; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp:312:28: warning: 'engvib' may be used uninitialized in this function [-Wmaybe-uninitialized] ptr[n] = engvib; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp:318:30: warning: 'engtrans' may be used uninitialized in this function [-Wmaybe-uninitialized] ptr[n] = engtrans; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp:306:28: warning: 'engpot' may be used uninitialized in this function [-Wmaybe-uninitialized] ptr[n] = engpot; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp:321:34: warning: 'omegasq' may be used uninitialized in this function [-Wmaybe-uninitialized] ptr[n] = sqrt(omegasq); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp:324:26: warning: 'vvib' may be used uninitialized in this function [-Wmaybe-uninitialized] ptr[n] = vvib; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp:201:47: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] btype = onemols[imol]->bond_type[iatom][i]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_bond_local.cpp:201:29: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] btype = onemols[imol]->bond_type[iatom][i]; ^ [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_cluster_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_cluster_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_cluster_atom.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin1d()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:1512:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized] if (xremap < boxlo[idim]) xremap += prd[idim]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:1513:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized] if (xremap >= boxhi[idim]) xremap -= prd[idim]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:1512:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized] if (xremap < boxlo[idim]) xremap += prd[idim]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin2d()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:1614:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized] if (yremap < boxlo[jdim]) yremap += prd[jdim]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:1615:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized] if (yremap >= boxhi[jdim]) yremap -= prd[jdim]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:1614:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized] if (yremap < boxlo[jdim]) yremap += prd[jdim]; ^ [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_cna_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_cna_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_cna_atom.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin3d()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:1747:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized] if (zremap < boxlo[kdim]) zremap += prd[kdim]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:1748:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized] if (zremap >= boxhi[kdim]) zremap -= prd[kdim]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:1747:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized] if (zremap < boxlo[kdim]) zremap += prd[kdim]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp: In constructor 'LAMMPS_NS::ComputeChunkAtom::ComputeChunkAtom(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:413:29: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized] delta[idim] *= scale; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:263:59: warning: 'idim' may be used uninitialized in this function [-Wmaybe-uninitialized] maxvalue[idim] = force->numeric(FLERR,arg[iarg+3]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_chunk_atom.cpp:197:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized] if (strcmp(arg[iarg],"region") == 0) { ^ [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_com.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_com.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_com.cpp [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_com_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_com_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_com_chunk.cpp [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_contact_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_contact_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_contact_atom.cpp [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_coord_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_coord_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_coord_atom.cpp [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral.cpp [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral_local.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral_local.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral_local.cpp [ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dipole_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dipole_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dipole_chunk.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral_local.cpp: In member function 'int LAMMPS_NS::ComputeDihedralLocal::compute_dihedrals(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral_local.cpp:162:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] tagprev = tag[atom2] - iatom - 1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral_local.cpp:161:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] if (tag[atom2] != onemols[imol]->dihedral_atom2[atom2][i]) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_dihedral_local.cpp:219:17: warning: 'pbuf' may be used uninitialized in this function [-Wmaybe-uninitialized] pbuf[n] = 180.0*atan2(s,c)/MY_PI; ^ [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_displace_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_displace_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_displace_atom.cpp [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_erotate_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_erotate_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_erotate_sphere.cpp [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_erotate_sphere_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_erotate_sphere_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_erotate_sphere_atom.cpp [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_fragment_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_fragment_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_fragment_atom.cpp [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_global_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_global_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_global_atom.cpp [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_group_group.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_group_group.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_group_group.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_global_atom.cpp: In member function 'virtual void LAMMPS_NS::ComputeGlobalAtom::compute_peratom()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_global_atom.cpp:521:29: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized] if (j >= 0 && j < vmax) array_atom[i][m] = source[j]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_global_atom.cpp:452:29: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized] if (j >= 0 && j < vmax) array_atom[i][m] = source[j]; ^ [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_gyration.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_gyration.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_gyration.cpp [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_gyration_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_gyration_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_gyration_chunk.cpp [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_heat_flux.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_heat_flux.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_heat_flux.cpp [ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_hexorder_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_hexorder_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_hexorder_atom.cpp [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper.cpp [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper_local.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper_local.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper_local.cpp [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_inertia_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_inertia_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_inertia_chunk.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper_local.cpp: In member function 'int LAMMPS_NS::ComputeImproperLocal::compute_impropers(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper_local.cpp:163:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] tagprev = tag[atom2] - iatom - 1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper_local.cpp:162:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] if (tag[atom2] != onemols[imol]->improper_atom2[atom2][i]) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_improper_local.cpp:218:17: warning: 'cbuf' may be used uninitialized in this function [-Wmaybe-uninitialized] cbuf[n] = 180.0*acos(c)/MY_PI; ^ [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_ke.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_ke.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_ke.cpp [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_ke_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_ke_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_ke_atom.cpp [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_msd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_msd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_msd.cpp [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_msd_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_msd_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_msd_chunk.cpp [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_omega_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_omega_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_omega_chunk.cpp [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_orientorder_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_orientorder_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_orientorder_atom.cpp [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pair.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pair.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pair.cpp [ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pair_local.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pair_local.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pair_local.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pe.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pe.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pe.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pe_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pe_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pe_atom.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pressure.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pressure.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pressure.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_property_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_property_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_property_atom.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pressure.cpp: In member function 'virtual double LAMMPS_NS::ComputePressure::compute_scalar()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pressure.cpp:205:42: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] scalar = (temperature->dof * boltz * t + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pressure.cpp: In member function 'virtual void LAMMPS_NS::ComputePressure::compute_vector()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_pressure.cpp:243:33: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized] vector[i] = (ke_tensor[i] + virial[i]) * inv_volume * nktv2p; ^ [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_property_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_property_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_property_chunk.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_property_local.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_property_local.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_property_local.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_rdf.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_rdf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_rdf.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_reduce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_reduce.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_reduce.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_reduce_region.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_reduce_region.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_reduce_region.cpp [ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_slice.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_slice.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_slice.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_stress_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_stress_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_stress_atom.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_chunk.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_com.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_com.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_com.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_deform.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_deform.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_deform.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_partial.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_partial.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_profile.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_profile.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_profile.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_ramp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_ramp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_ramp.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_region.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_region.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_region.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_temp_sphere.cpp [ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_torque_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_torque_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_torque_chunk.cpp [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_vacf.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_vacf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_vacf.cpp [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_vcm_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_vcm_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/compute_vcm_chunk.cpp [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/create_atoms.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/create_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_atoms.cpp [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/create_bonds.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/create_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_bonds.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_atoms.cpp: In member function 'void LAMMPS_NS::CreateAtoms::add_random()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_atoms.cpp:656:55: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized] coord[1] < boxlo[1] || coord[1] >= boxhi[1] || ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_atoms.cpp:656:31: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized] coord[1] < boxlo[1] || coord[1] >= boxhi[1] || ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_atoms.cpp: In member function 'void LAMMPS_NS::CreateAtoms::command(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_atoms.cpp:228:46: warning: 'molseed' may be used uninitialized in this function [-Wmaybe-uninitialized] ranmol = new RanMars(lmp,molseed+comm->me); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_atoms.cpp:118:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized] if (strcmp(arg[iarg],"basis") == 0) { ^ [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/create_box.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/create_box.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_box.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_bonds.cpp: In member function 'void LAMMPS_NS::CreateBonds::command(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_bonds.cpp:110:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized] if (strcmp(arg[iarg],"special") == 0) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/create_bonds.cpp:129:10: warning: 'style' may be used uninitialized in this function [-Wmaybe-uninitialized] } else if (style == SANGLE) { ^ [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/delete_atoms.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/delete_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/delete_atoms.cpp [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/delete_bonds.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/delete_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/delete_bonds.cpp [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral.cpp [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_hybrid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_hybrid.cpp [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_zero.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_zero.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_hybrid.cpp: In member function 'virtual void LAMMPS_NS::DihedralHybrid::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_hybrid.cpp:323:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nstyles,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_hybrid.cpp:332:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dihedral_hybrid.cpp:335:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(keywords[m],sizeof(char),n,fp); ^ [ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/displace_atoms.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/displace_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/displace_atoms.cpp [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/domain.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/domain.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/domain.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/displace_atoms.cpp: In member function 'void LAMMPS_NS::DisplaceAtoms::command(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/displace_atoms.cpp:128:5: warning: 'd_dim' may be used uninitialized in this function [-Wmaybe-uninitialized] if (d_dim == 0) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/displace_atoms.cpp:146:5: warning: 'coord_dim' may be used uninitialized in this function [-Wmaybe-uninitialized] if (coord_dim == 0) { ^ [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/domain.cpp: In member function 'void LAMMPS_NS::Domain::box_too_small_check()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/domain.cpp:853:43: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] if (onemols[imol]->bond_type[iatom][j] < 0) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/domain.cpp:853:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] if (onemols[imol]->bond_type[iatom][j] < 0) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/domain.cpp: In member function 'void LAMMPS_NS::Domain::image_check()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/domain.cpp:754:43: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] if (onemols[imol]->bond_type[iatom][j] < 0) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/domain.cpp:754:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] if (onemols[imol]->bond_type[iatom][j] < 0) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump.cpp: In member function 'virtual void LAMMPS_NS::Dump::write()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump.cpp:511:20: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized] atom->v = vhold; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump.cpp:510:20: warning: 'xhold' may be used uninitialized in this function [-Wmaybe-uninitialized] atom->x = xhold; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump.cpp:512:28: warning: 'imagehold' may be used uninitialized in this function [-Wmaybe-uninitialized] atom->image = imagehold; ^ [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_atom.cpp [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_cfg.cpp.o [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_custom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_custom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_custom.cpp /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_cfg.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_cfg.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_custom.cpp: In member function 'virtual int LAMMPS_NS::DumpCustom::count()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_custom.cpp:1026:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses] if (choose[i] && (*ptr == 0.0 && values[i] == 0.0) || ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_custom.cpp:1031:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses] if (choose[i] && (*ptr == 0.0 && value == 0.0) || ^ [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_dcd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_dcd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_dcd.cpp [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_custom.cpp:1032:30: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized] (*ptr != 0.0 && value != 0.0)) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_custom.cpp:1027:41: warning: 'values' may be used uninitialized in this function [-Wmaybe-uninitialized] (*ptr != 0.0 && values[i] != 0.0)) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_custom.cpp:528:18: warning: 'ptrhold' may be used uninitialized in this function [-Wmaybe-uninitialized] double *ptr,*ptrhold; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp: In member function 'void LAMMPS_NS::DumpImage::create_image()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp:1033:66: warning: 'color2' may be used uninitialized in this function [-Wmaybe-uninitialized] image->draw_cylinder(xmid,x[atom2],color2,diameter,3); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp:1027:66: warning: 'color1' may be used uninitialized in this function [-Wmaybe-uninitialized] image->draw_cylinder(x[atom1],xmid,color1,diameter,3); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp:968:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] btype = atom->map(onemols[imol]->bond_type[iatom][m]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp:968:41: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] btype = atom->map(onemols[imol]->bond_type[iatom][m]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp:831:55: warning: 'color' may be used uninitialized in this function [-Wmaybe-uninitialized] image->draw_cylinder(pt1,pt2,color,ldiamvalue,3); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp:1036:72: warning: 'diameter' may be used uninitialized in this function [-Wmaybe-uninitialized] } else image->draw_cylinder(x[atom1],x[atom2],color,diameter,3); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp: In member function 'virtual int LAMMPS_NS::DumpImage::modify_param(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_image.cpp:1300:23: warning: 'factor' may be used uninitialized in this function [-Wmaybe-uninitialized] int n = 6 + factor*nentry; ^ [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_local.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_local.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_local.cpp [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_movie.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_movie.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_movie.cpp [ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_xyz.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_xyz.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/dump_xyz.cpp [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/error.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/error.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/error.cpp [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/finish.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/finish.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/finish.cpp [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/finish.cpp: In member function 'void LAMMPS_NS::Finish::end(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/finish.cpp:776:33: warning: 'nneighfull' may be used uninitialized in this function [-Wmaybe-uninitialized] tmp = MAX(nneigh,nneighfull); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/finish.cpp:776:33: warning: 'nneigh' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_adapt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_adapt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_adapt.cpp [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_addforce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_addforce.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_addforce.cpp [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_atom.cpp [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_chunk.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_chunk.cpp: In member function 'virtual void LAMMPS_NS::FixAveChunk::end_of_step()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_chunk.cpp:1058:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result] if (fileend > 0) ftruncate(fileno(fp),fileend); ^ [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_correlate.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_correlate.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_correlate.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_correlate.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelate::end_of_step()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_correlate.cpp:537:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result] if (fileend > 0) ftruncate(fileno(fp),fileend); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_correlate.cpp:482:34: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized] values[lastindex][i] = scalar; ^ [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo.cpp [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo_weight.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo_weight.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo_weight.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo.cpp: In member function 'virtual void LAMMPS_NS::FixAveHisto::end_of_step()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo.cpp:828:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result] if (fileend > 0) ftruncate(fileno(fp),fileend); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo_weight.cpp: In member function 'virtual void LAMMPS_NS::FixAveHistoWeight::end_of_step()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo_weight.cpp:499:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result] if (fileend > 0) ftruncate(fileno(fp),fileend); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo.cpp: In constructor 'LAMMPS_NS::FixAveHisto::FixAveHisto(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_histo.cpp:233:10: warning: 'kindflag' may be used uninitialized in this function [-Wmaybe-uninitialized] else if (kindflag != kind) ^ [ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_aveforce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_aveforce.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_aveforce.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp:700:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result] if (fileend > 0) ftruncate(fileno(fp),fileend); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_vector(LAMMPS_NS::bigint)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp:911:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result] if (fileend > 0) ftruncate(fileno(fp),fileend); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp: In member function 'int LAMMPS_NS::FixAveTime::column_length(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp:971:9: warning: 'lengthone' may be used uninitialized in this function [-Wmaybe-uninitialized] if (lengthone != nrows) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp:629:29: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized] else vector[i] += scalar; ^ [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_balance.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_balance.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_balance.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp: In constructor 'LAMMPS_NS::FixAveTime::FixAveTime(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_ave_time.cpp:411:9: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized] if (value == -1) ^ [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_box_relax.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_box_relax.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_box_relax.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_balance.cpp: In member function 'void LAMMPS_NS::FixBalance::rebalance()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_balance.cpp:298:67: warning: 'sendproc' may be used uninitialized in this function [-Wmaybe-uninitialized] if (lbstyle == BISECTION) irregular->migrate_atoms(0,1,sendproc); ^ [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_controller.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_controller.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_controller.cpp [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_deform.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_deform.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_deform.cpp [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_deprecated.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_deprecated.cpp [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_drag.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_drag.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_drag.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_deform.cpp: In constructor 'LAMMPS_NS::FixDeform::FixDeform(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_deform.cpp:184:18: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized] set[index].style = VARIABLE; ^ [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_dt_reset.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_dt_reset.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_dt_reset.cpp [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_enforce2d.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_enforce2d.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_enforce2d.cpp [ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_external.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_external.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_external.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_gravity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_gravity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_gravity.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_group.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_group.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_group.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_halt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_halt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_halt.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_heat.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_heat.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_heat.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_indent.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_indent.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_indent.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_langevin.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_langevin.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_langevin.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_lineforce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_lineforce.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_lineforce.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_minimize.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_minimize.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_minimize.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_momentum.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_momentum.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_momentum.cpp [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_move.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_move.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_move.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_move.cpp: In member function 'virtual void LAMMPS_NS::FixMove::initial_integrate(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_move.cpp:847:61: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized] if (zvarstyle == EQUAL) x[i][2] = xoriginal[i][2] + dz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_move.cpp:817:61: warning: 'dy' may be used uninitialized in this function [-Wmaybe-uninitialized] if (yvarstyle == EQUAL) x[i][1] = xoriginal[i][1] + dy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_move.cpp:787:61: warning: 'dx' may be used uninitialized in this function [-Wmaybe-uninitialized] if (xvarstyle == EQUAL) x[i][0] = xoriginal[i][0] + dx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_move.cpp: In constructor 'LAMMPS_NS::FixMove::FixMove(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_move.cpp:176:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized] if (strcmp(arg[iarg],"units") == 0) { ^ [ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_neigh_history.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_neigh_history.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_neigh_history.cpp In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_neigh_history.cpp:17:0: /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_neigh_history.h: In constructor 'LAMMPS_NS::FixNeighHistory::FixNeighHistory(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_neigh_history.h:76:12: warning: 'LAMMPS_NS::FixNeighHistory::valuepartner' will be initialized after [-Wreorder] double **valuepartner; // values for the partners ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_neigh_history.h:34:15: warning: 'LAMMPS_NS::Pair* LAMMPS_NS::FixNeighHistory::pair' [-Wreorder] class Pair *pair; // ptr to pair style that uses neighbor history ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_neigh_history.cpp:36:1: warning: when initialized here [-Wreorder] FixNeighHistory::FixNeighHistory(LAMMPS *lmp, int narg, char **arg) : ^ [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nh.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nh.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nh.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nh_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nh_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nh_sphere.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nph.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nph.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nph.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nph_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nph_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nph_sphere.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_npt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_npt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_npt.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_npt_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_npt_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_npt_sphere.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve_limit.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve_limit.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve_limit.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve_noforce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve_noforce.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve_noforce.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nve_sphere.cpp [ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nvt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nvt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nvt.cpp [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nvt_sllod.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nvt_sllod.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nvt_sllod.cpp [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nvt_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nvt_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_nvt_sphere.cpp [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_planeforce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_planeforce.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_planeforce.cpp [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_press_berendsen.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_press_berendsen.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_press_berendsen.cpp [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_print.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_print.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_print.cpp [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_property_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_property_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_property_atom.cpp [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_read_restart.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_read_restart.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_read_restart.cpp [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_recenter.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_recenter.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_recenter.cpp [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_respa.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_respa.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_respa.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_recenter.cpp: In member function 'virtual void LAMMPS_NS::FixRecenter::initial_integrate(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_recenter.cpp:182:41: warning: 'bboxhi' may be used uninitialized in this function [-Wmaybe-uninitialized] ztarget = bboxlo[2] + zcom*(bboxhi[2] - bboxlo[2]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_recenter.cpp:182:53: warning: 'bboxlo' may be used uninitialized in this function [-Wmaybe-uninitialized] ztarget = bboxlo[2] + zcom*(bboxhi[2] - bboxlo[2]); ^ [ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_restrain.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_restrain.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_restrain.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_setforce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_setforce.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_setforce.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_restrain.cpp: In member function 'void LAMMPS_NS::FixRestrain::restrain_dihedral(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_restrain.cpp:566:33: warning: 'ddf1' may be used uninitialized in this function [-Wmaybe-uninitialized] df1 = df1*cos_target[m] - ddf1*sin_target[m]; ^ [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring_chunk.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring_chunk.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring_rg.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring_rg.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring_rg.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring_self.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring_self.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_spring_self.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_store.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_store.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_store.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_store_force.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_store_force.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_store_force.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_store_state.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_store_state.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_store_state.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_berendsen.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_berendsen.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_berendsen.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_csld.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_csld.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_csld.cpp [ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_csvr.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_csvr.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_csvr.cpp [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_rescale.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_rescale.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_temp_rescale.cpp [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_tmd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_tmd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_tmd.cpp [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_vector.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_vector.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_vector.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_tmd.cpp: In member function 'void LAMMPS_NS::FixTMD::readfile(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_tmd.cpp:457:7: warning: 'imageflag' may be used uninitialized in this function [-Wmaybe-uninitialized] if (imageflag) ^ [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_viscous.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_viscous.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_viscous.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_vector.cpp: In constructor 'LAMMPS_NS::FixVector::FixVector(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_vector.cpp:149:26: warning: 'finalvalue' may be used uninitialized in this function [-Wmaybe-uninitialized] extarray = finalvalue; ^ [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall.cpp [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_harmonic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_harmonic.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall.cpp: In constructor 'LAMMPS_NS::FixWall::FixWall(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall.cpp:77:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized] wallwhich[nwall] = newwall; ^ [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_lj1043.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_lj1043.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_lj1043.cpp [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_lj126.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_lj126.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_lj126.cpp [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_lj93.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_lj93.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_lj93.cpp [ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_reflect.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_reflect.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_reflect.cpp [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_region.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_region.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_region.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_reflect.cpp: In constructor 'LAMMPS_NS::FixWallReflect::FixWallReflect(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/fix_wall_reflect.cpp:68:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized] wallwhich[nwall] = newwall; ^ [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/force.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/force.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/force.cpp [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/group.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/group.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/group.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/group.cpp: In member function 'void LAMMPS_NS::Group::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/group.cpp:730:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&ngroup,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/group.cpp:742:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/group.cpp:746:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(names[i],sizeof(char),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/group.cpp: In member function 'void LAMMPS_NS::Group::assign(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/group.cpp:301:12: warning: 'category' may be used uninitialized in this function [-Wmaybe-uninitialized] else if (category == MOLECULE) tattribute = atom->molecule; ^ [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/image.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/image.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/image.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/image.cpp: In member function 'void LAMMPS_NS::Image::draw_cube(double*, double*, double)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/image.cpp:516:31: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] tdir[2] = camDir[2] * t; ^ [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance.cpp [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_group.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_group.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_group.cpp [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_neigh.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_neigh.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_neigh.cpp [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_store.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_store.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_store.cpp [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_time.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_time.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_time.cpp [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_var.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_var.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/imbalance_var.cpp [ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/improper.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/improper.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/improper.cpp [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_hybrid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_hybrid.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_hybrid.cpp: In member function 'virtual void LAMMPS_NS::ImproperHybrid::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_hybrid.cpp:320:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nstyles,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_hybrid.cpp:329:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_hybrid.cpp:332:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(keywords[m],sizeof(char),n,fp); ^ [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_zero.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/improper_zero.cpp [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/info.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/info.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/info.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/info.cpp: In function 'void print_columns(FILE*, std::vector >&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/info.cpp:1123:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (int i = 0; i < styles.size(); ++i) { ^ [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/input.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/input.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/input.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/input.cpp: In member function 'void LAMMPS_NS::Input::partition()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/input.cpp:1161:3: warning: 'yesflag' may be used uninitialized in this function [-Wmaybe-uninitialized] if (yesflag) { ^ [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/integrate.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/integrate.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/integrate.cpp [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/irregular.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/irregular.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/irregular.cpp [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/kspace.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/kspace.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/kspace.cpp [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/lammps.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/lammps.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/lammps.cpp [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/lattice.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/lattice.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/lattice.cpp [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/library.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/library.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/library.cpp [ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/math_special.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/math_special.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_special.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp: In function 'void MathExtra::no_squish_rotate(int, double*, double*, double*, double)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp:260:52: warning: 'kq[3]' may be used uninitialized in this function [-Wmaybe-uninitialized] phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp:260:39: warning: 'kq[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp:260:26: warning: 'kq[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp:260:13: warning: 'kq[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp:271:28: warning: 'kp[3]' may be used uninitialized in this function [-Wmaybe-uninitialized] p[3] = c_phi*p[3] + s_phi*kp[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp:270:28: warning: 'kp[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] p[2] = c_phi*p[2] + s_phi*kp[2]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp:269:28: warning: 'kp[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] p[1] = c_phi*p[1] + s_phi*kp[1]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/math_extra.cpp:268:28: warning: 'kp[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] p[0] = c_phi*p[0] + s_phi*kp[0]; ^ [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/memory.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/memory.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/memory.cpp [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/min.cpp [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_cg.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_cg.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/min_cg.cpp [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_fire.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_fire.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/min_fire.cpp [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_hftn.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_hftn.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/min_hftn.cpp [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_linesearch.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_linesearch.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/min_linesearch.cpp [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_quickmin.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_quickmin.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/min_quickmin.cpp [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_sd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/min_sd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/min_sd.cpp [ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/minimize.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/minimize.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/minimize.cpp [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/molecule.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/molecule.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/molecule.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp: In member function 'int LAMMPS_NS::Modify::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1363:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nfix_restart_global,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1380:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1383:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(id_restart_global[i],sizeof(char),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1386:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1389:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(style_restart_global[i],sizeof(char),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1392:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1395:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(state_restart_global[i],sizeof(char),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1405:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nfix_restart_peratom,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1422:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1425:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(id_restart_peratom[i],sizeof(char),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1428:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1431:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(style_restart_peratom[i],sizeof(char),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/modify.cpp:1434:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nbin.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nbin.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nbin.cpp [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nbin_standard.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nbin_standard.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nbin_standard.cpp [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.cpp [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_request.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_request.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_request.cpp [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/neighbor.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/neighbor.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/neighbor.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/neighbor.cpp: In member function 'int LAMMPS_NS::Neighbor::choose_stencil(LAMMPS_NS::NeighRequest*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/neighbor.cpp:1674:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized] if (newtflag) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/neighbor.cpp: In member function 'int LAMMPS_NS::Neighbor::choose_pair(LAMMPS_NS::NeighRequest*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/neighbor.cpp:1782:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized] if (newtflag) { ^ [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair.cpp [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_copy.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_copy.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_copy.cpp [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin.cpp: In member function 'virtual void LAMMPS_NS::NPairFullBin::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin.cpp:104:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin.cpp:103:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin.cpp:103:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_atomonly.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_atomonly.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_atomonly.cpp [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_ghost.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_ghost.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairFullBinGhost::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_ghost.cpp:110:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_ghost.cpp:109:67: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_bin_ghost.cpp:109:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_multi.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_multi.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_multi.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_multi.cpp: In member function 'virtual void LAMMPS_NS::NPairFullMulti::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_multi.cpp:111:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_multi.cpp:110:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_multi.cpp:110:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq.cpp: In member function 'virtual void LAMMPS_NS::NPairFullNsq::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq.cpp:105:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq.cpp:104:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq.cpp:104:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq.cpp:89:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized] if (includegroup && !(mask[j] & bitmask)) continue; ^ [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq_ghost.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq_ghost.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairFullNsqGhost::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq_ghost.cpp:104:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq_ghost.cpp:103:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_full_nsq_ghost.cpp:103:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_atomonly_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_atomonly_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_atomonly_newton.cpp [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtoff::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff.cpp:108:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff.cpp:107:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff.cpp:107:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff_ghost.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff_ghost.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtoffGhost::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff_ghost.cpp:116:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff_ghost.cpp:115:67: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newtoff_ghost.cpp:115:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewton::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton.cpp:140:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton.cpp:139:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton.cpp:139:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton_tri.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtonTri::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton_tri.cpp:114:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton_tri.cpp:113:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_bin_newton_tri.cpp:113:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newtoff.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewtoff::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newtoff.cpp:115:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newtoff.cpp:114:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newtoff.cpp:114:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewton::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton.cpp:148:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton.cpp:147:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton.cpp:147:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton_tri.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewtonTri::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton_tri.cpp:123:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton_tri.cpp:122:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_multi_newton_tri.cpp:122:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewtoff::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff.cpp:106:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff.cpp:105:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff.cpp:105:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff.cpp:90:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized] if (includegroup && !(mask[j] & bitmask)) continue; ^ [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff_ghost.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff_ghost.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewtoffGhost::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff_ghost.cpp:115:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff_ghost.cpp:114:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff_ghost.cpp:114:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newtoff_ghost.cpp:127:39: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized] if (includegroup && !(mask[j] & bitmask)) continue; ^ [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newton.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewton::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newton.cpp:123:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newton.cpp:122:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newton.cpp:122:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_nsq_newton.cpp:91:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized] if (includegroup && !(mask[j] & bitmask)) continue; ^ [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewtoff::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp:174:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp:132:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp:131:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp:131:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp:152:41: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] neighptr_middle[n_middle++] = j ^ (which << SBBITS); ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] errorflag = 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newtoff.cpp:72:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewton::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:220:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:178:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:177:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:177:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:153:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] neighptr_middle[n_middle++] = j ^ (which << SBBITS); ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] index += n; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:71:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:220:45: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:221:36: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] numneigh_middle[i] = n_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton.cpp:219:29: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] ilist_middle[inum] = i; ^ [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewtonTri::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp:182:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp:140:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp:139:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp:139:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp:160:41: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] neighptr_middle[n_middle++] = j ^ (which << SBBITS); ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] errorflag = 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_bin_newton_tri.cpp:72:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaNsqNewtoff::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp:169:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp:130:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp:129:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp:129:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp:148:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] neighptr_middle[n_middle++] = j ^ (which << SBBITS); ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] errorflag = 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp:76:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newtoff.cpp:114:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized] if (includegroup && !(mask[j] & bitmask)) continue; ^ [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaNsqNewton::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp:189:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp:149:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp:148:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp:148:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp:168:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] neighptr_middle[n_middle++] = j ^ (which << SBBITS); ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] errorflag = 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp:78:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_respa_nsq_newton.cpp:117:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized] if (includegroup && !(mask[j] & bitmask)) continue; ^ [ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_bin_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_bin_newtoff.cpp [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_bin_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_bin_newton.cpp [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_bin_newton_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_bin_newton_tri.cpp [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newtoff.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeNsqNewtoff::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newtoff.cpp:79:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized] if (includegroup && !(mask[j] & bitmask)) continue; ^ [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newton.cpp [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_halffull_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_halffull_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_halffull_newtoff.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeNsqNewton::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_half_size_nsq_newton.cpp:82:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized] if (includegroup && !(mask[j] & bitmask)) continue; ^ [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_halffull_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_halffull_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_halffull_newton.cpp [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip.cpp [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_respa.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_respa.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_respa.cpp [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_size.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_size.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_size.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_respa.cpp: In member function 'virtual void LAMMPS_NS::NPairSkipRespa::build(LAMMPS_NS::NeighList*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_respa.cpp:152:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_respa.cpp:153:36: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] numneigh_middle[i] = n_middle; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_respa.cpp:16: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:223:67: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] if (posix_memalign(&ptr, LAMMPS_MEMALIGN, pagesize*sizeof(T))) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_respa.cpp:64:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_size_off2on.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_size_off2on.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_size_off2on.cpp [ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_size_off2on_oneside.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_size_off2on_oneside.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/npair_skip_size_off2on_oneside.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_bin_2d.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_bin_2d.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_bin_2d.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_bin_3d.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_bin_3d.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_bin_3d.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_ghost_bin_2d.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_ghost_bin_2d.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_ghost_bin_2d.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_ghost_bin_3d.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_ghost_bin_3d.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_ghost_bin_3d.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_multi_2d.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_multi_2d.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_multi_2d.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_multi_3d.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_multi_3d.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_full_multi_3d.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_2d_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_2d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_2d_newtoff.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_2d_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_2d_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_2d_newton.cpp [ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_2d_newton_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_2d_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_2d_newton_tri.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_3d_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_3d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_3d_newtoff.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_3d_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_3d_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_3d_newton.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_3d_newton_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_3d_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_bin_3d_newton_tri.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_ghost_bin_2d_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_ghost_bin_2d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_ghost_bin_2d_newtoff.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_ghost_bin_3d_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_ghost_bin_3d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_ghost_bin_3d_newtoff.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_2d_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_2d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_2d_newtoff.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_2d_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_2d_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_2d_newton.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_2d_newton_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_2d_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_2d_newton_tri.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_3d_newtoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_3d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_3d_newtoff.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_3d_newton.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_3d_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_3d_newton.cpp [ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_3d_newton_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_3d_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/nstencil_half_multi_3d_newton_tri.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_angle_all.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_angle_all.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_angle_all.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_angle_partial.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_angle_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_angle_partial.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_angle_template.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_angle_template.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_angle_template.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_bond_all.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_bond_all.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_bond_all.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_bond_partial.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_bond_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_bond_partial.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_bond_template.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_bond_template.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_bond_template.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_dihedral_all.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_dihedral_all.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_dihedral_all.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_dihedral_partial.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_dihedral_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_dihedral_partial.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_dihedral_template.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_dihedral_template.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_dihedral_template.cpp [ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_improper_all.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_improper_all.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_improper_all.cpp [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_improper_partial.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_improper_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_improper_partial.cpp [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_improper_template.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_improper_template.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ntopo_improper_template.cpp [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/output.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/output.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/output.cpp [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp: In member function 'void LAMMPS_NS::Pair::write_file(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp:1672:5: warning: 'rsq' may be used uninitialized in this function [-Wmaybe-uninitialized] if (rsq < cutsq[itype][jtype]) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp:1683:32: warning: 'q_hold' may be used uninitialized in this function [-Wmaybe-uninitialized] if (atom->q) atom->q = q_hold; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp: In member function 'virtual void LAMMPS_NS::Pair::init_tables(double, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp:408:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized] if (msmflag) ftable[i] = qqrd2e/r * fgamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp:395:30: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] etable[i] = qqrd2e/r * egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp:399:30: warning: 'derfc' may be used uninitialized in this function [-Wmaybe-uninitialized] etable[i] = qqrd2e/r * derfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp:409:61: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized] else ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair.cpp:409:56: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized] else ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2); ^ [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp: In member function 'virtual void LAMMPS_NS::PairBeck::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp:282:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp:286:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&AA[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp:287:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&BB[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp:288:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aa[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp:289:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp:290:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&beta[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp:291:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp: In member function 'virtual void LAMMPS_NS::PairBeck::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp:321:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_beck.cpp:322:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp: In member function 'virtual void LAMMPS_NS::PairBorn::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:334:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:338:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:339:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&rho[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:340:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:341:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&c[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:342:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&d[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:343:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp: In member function 'virtual void LAMMPS_NS::PairBorn::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:374:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:375:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:376:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born.cpp:377:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:366:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:370:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:371:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&rho[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:372:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:373:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&c[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:374:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&d[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:375:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:407:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:408:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:409:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:410:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:411:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:365:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:369:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:370:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&rho[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:371:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:372:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&c[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:373:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&d[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:374:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:406:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alf,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:407:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:408:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:409:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:410:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:168:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:164:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:165:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:169:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] d[itype][jtype]*r6inv*r2inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:164:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulWolf::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:487:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:488:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:482:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor * (erfcc-e_shift*r); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:483:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:482:41: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor * (erfcc-e_shift*r); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:171:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:168:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_wolf.cpp:172:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] d[itype][jtype]*r6inv*r2inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulDSF::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:489:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:490:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:484:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:485:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_born_coul_dsf.cpp:484:37: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp [ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp: In member function 'virtual void LAMMPS_NS::PairBuck::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp:312:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp:316:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp:317:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&rho[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp:318:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&c[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp:319:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp: In member function 'virtual void LAMMPS_NS::PairBuck::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp:348:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp:349:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp:350:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck.cpp:351:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:366:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:370:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:371:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&rho[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:372:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&c[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:373:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:374:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:405:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:406:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:407:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:408:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:409:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulCut::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:467:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:467:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:146:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_buck_coul_cut.cpp:146:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_debye.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_debye.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp:249:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp:252:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp:276:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp:277:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_cut.cpp:278:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDebye::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_debye.cpp:153:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_debye.cpp:154:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&kappa,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_debye.cpp:155:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_debye.cpp:156:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_streitz.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_streitz.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_streitz.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDSF::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp:257:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDSF::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp:281:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp:282:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp:283:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_dsf.cpp:284:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulWolf::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp:254:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulWolf::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp:278:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alf,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp:279:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp:280:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp:281:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp: In member function 'virtual double LAMMPS_NS::PairCoulWolf::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp:318:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor * (erfcc-e_shift*r); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp:319:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_coul_wolf.cpp:318:41: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor * (erfcc-e_shift*r); ^ [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp: In member function 'virtual void LAMMPS_NS::PairDPD::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp:319:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp:323:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a0[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp:324:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&gamma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp:325:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp: In member function 'virtual void LAMMPS_NS::PairDPD::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp:353:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&temperature,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp:354:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp:355:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&seed,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd.cpp:356:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp: In member function 'virtual void LAMMPS_NS::PairDPDTstat::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp:234:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp:238:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&gamma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp:239:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp: In member function 'virtual void LAMMPS_NS::PairDPDTstat::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp:267:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&t_start,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp:268:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&t_stop,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp:269:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp:270:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&seed,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_dpd_tstat.cpp:271:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp: In member function 'virtual void LAMMPS_NS::PairGauss::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp:285:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp:289:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp:290:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&b[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp:291:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp: In member function 'virtual void LAMMPS_NS::PairGauss::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp:318:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp:319:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_gauss.cpp:320:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp:668:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nstyles,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp:685:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp:688:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(keywords[m],sizeof(char),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp:694:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp:698:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(special_lj[m],sizeof(double),4,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp:701:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp:705:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(special_coul[m],sizeof(double),4,fp); ^ [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid_overlay.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid_overlay.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid_overlay.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::coeff(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid.cpp:393:7: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized] int multflag; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid_overlay.cpp: In member function 'virtual void LAMMPS_NS::PairHybridOverlay::coeff(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_hybrid_overlay.cpp:47:7: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized] int multflag; ^ [ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:612:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:616:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:617:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:618:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:647:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:648:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:649:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:650:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::compute_outer(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:394:44: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair = factor_lj*forcelj*r2inv; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj96_cut.cpp:398:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl,0.0,fpair,delx,dely,delz); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:283:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:287:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:288:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:289:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:290:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:317:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp: In member function 'virtual double LAMMPS_NS::PairLJCubic::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:349:32: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] (PHIS + DPHIDS*t - A3*t*t*t/6.0); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:346:66: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:134:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] (PHIS + DPHIDS*t - A3*t*t*t/6.0); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cubic.cpp:131:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]); ^ [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:606:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:610:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:611:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:612:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:641:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:642:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:643:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:644:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:357:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:361:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:362:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:363:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:364:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:394:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:395:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:396:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:397:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:398:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulCut::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:453:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_cut.cpp:140:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::compute_outer(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:388:44: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair = factor_lj*forcelj*r2inv; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut.cpp:392:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl,0.0,fpair,delx,dely,delz); ^ [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDebye::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:174:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:175:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:176:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&kappa,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:177:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:178:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulDebye::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:216:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:212:71: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:212:53: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDebye::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:110:72: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:110:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_debye.cpp:113:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:380:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:384:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:385:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:386:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:416:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:417:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:418:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:419:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:420:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:421:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:168:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:169:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:162:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:168:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulDSF::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:465:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:465:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:465:37: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_dsf.cpp:459:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:375:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:379:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:380:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:381:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:412:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alf,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:413:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:414:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:415:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:416:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:417:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:172:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_cut_coul_wolf.cpp:165:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpand::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp:328:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp:332:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp:333:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp:334:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&shift[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp:335:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpand::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp:364:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp:365:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp:366:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_expand.cpp:367:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:345:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:349:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:350:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:351:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:352:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:382:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:383:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:384:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:385:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp: In member function 'virtual double LAMMPS_NS::PairLJGromacs::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:439:65: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] phiswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs.cpp:141:71: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:383:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:387:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:388:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:417:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_inner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:418:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:419:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul_inner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:420:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:421:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:422:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual double LAMMPS_NS::PairLJGromacsCoulGromacs::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:504:51: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized] (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:500:66: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:493:38: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized] tc*tc*tc * (coulsw3 + coulsw4*tc); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:160:58: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoulswitch = tc*tc*tc * (coulsw3 + coulsw4*tc); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:170:59: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized] (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:166:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_gromacs_coul_gromacs.cpp:166:46: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]); ^ [ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:356:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:360:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:361:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:362:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:363:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:393:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:394:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:395:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:396:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp: In member function 'virtual double LAMMPS_NS::PairLJSmooth::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:454:30: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized] ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:453:60: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] ljsw2[itype][jtype]*tsq/2.0 - ljsw3[itype][jtype]*tsq*t/3.0 - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:449:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:144:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized] ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:143:68: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] ljsw2[itype][jtype]*tsq/2.0 - ljsw3[itype][jtype]*tsq*t/3.0 - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth.cpp:139:27: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmoothLinear::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp:287:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp:291:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp:292:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp:293:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmoothLinear::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp:320:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_lj_smooth_linear.cpp:321:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:633:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:637:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:638:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:639:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&gamR[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:640:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&gamA[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:641:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:672:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:673:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:674:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:675:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp: In member function 'virtual void LAMMPS_NS::PairMorse::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp:269:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp:273:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&d0[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp:274:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp:275:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp:276:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp: In member function 'virtual void LAMMPS_NS::PairMorse::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp:304:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp:305:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_morse.cpp:306:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::compute_outer(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:396:46: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair = factor_mie*forcemie*r2inv; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_mie_cut.cpp:400:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl,0.0,fpair,delx,dely,delz); ^ [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp:250:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp:254:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&prefactor[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp:255:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp:280:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_soft.cpp:281:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp: In member function 'void LAMMPS_NS::PairTable::read_table(LAMMPS_NS::PairTable::Table*, char*, char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:378:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); // no match, skip section ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:380:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:381:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:387:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:415:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp: In member function 'virtual void LAMMPS_NS::PairTable::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:977:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabstyle,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:978:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tablength,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:979:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ewaldflag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:980:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&pppmflag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:981:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&msmflag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:982:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&dispersionflag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:983:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tip4pflag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp: In member function 'virtual double LAMMPS_NS::PairTable::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:1042:41: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized] ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:1042:14: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized] ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:1039:35: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] phi = tb->e[itable] + fraction*tb->de[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp: In member function 'virtual void LAMMPS_NS::PairTable::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:177:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized] ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:177:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized] ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_table.cpp:174:45: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = tb->e[itable] + fraction*tb->de[itable]; ^ [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp: In member function 'virtual void LAMMPS_NS::PairUFM::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp:290:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp:294:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp:295:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp:296:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp: In member function 'virtual void LAMMPS_NS::PairUFM::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp:324:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp:325:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_ufm.cpp:326:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zbl.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zbl.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp: In member function 'virtual void LAMMPS_NS::PairYukawa::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp:256:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp:260:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp:261:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp: In member function 'virtual void LAMMPS_NS::PairYukawa::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp:288:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&kappa,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp:289:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp:290:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_yukawa.cpp:291:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zero.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zero.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zbl.cpp: In member function 'virtual void LAMMPS_NS::PairZBL::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zbl.cpp:142:53: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] (sw3[itype][jtype] + sw4[itype][jtype]*t); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zbl.cpp: In member function 'virtual double LAMMPS_NS::PairZBL::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zbl.cpp:290:45: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] (sw3[itype][jtype] + sw4[itype][jtype]*t); ^ [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/procmap.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/procmap.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/procmap.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zero.cpp: In member function 'virtual void LAMMPS_NS::PairZero::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zero.cpp:176:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zero.cpp:180:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zero.cpp: In member function 'virtual void LAMMPS_NS::PairZero::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zero.cpp:205:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/pair_zero.cpp:206:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&coeffflag,sizeof(int),1,fp); ^ [ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/python.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/python.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/python.cpp [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/random_mars.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/random_mars.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/random_mars.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/procmap.cpp: In member function 'void LAMMPS_NS::ProcMap::output(char*, int*, int***)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/procmap.cpp:687:16: warning: 'kme' may be used uninitialized in this function [-Wmaybe-uninitialized] vec[5] = kme + 1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/procmap.cpp:686:16: warning: 'jme' may be used uninitialized in this function [-Wmaybe-uninitialized] vec[4] = jme + 1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/procmap.cpp:685:16: warning: 'ime' may be used uninitialized in this function [-Wmaybe-uninitialized] vec[3] = ime + 1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/procmap.cpp: In member function 'int LAMMPS_NS::ProcMap::best_factors(int, int**, int*, int, int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/procmap.cpp:881:10: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized] return index; ^ [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/random_park.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/random_park.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/random_park.cpp [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/rcb.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/rcb.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/rcb.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/rcb.cpp: In member function 'void LAMMPS_NS::RCB::compute(int, int, double**, double*, double*, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/rcb.cpp:559:73: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized] if (readnumber == 2) MPI_Send(NULL,0,MPI_INT,procpartner2,0,world); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/rcb.cpp:487:29: warning: 'valuehalf_select' may be used uninitialized in this function [-Wmaybe-uninitialized] else lo[dim] = valuehalf; ^ [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/read_data.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/read_data.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_data.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/rcb.cpp: In member function 'void LAMMPS_NS::RCB::compute_old(int, int, double**, double*, double*, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/rcb.cpp:1051:73: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized] if (readnumber == 2) MPI_Send(NULL,0,MPI_INT,procpartner2,0,world); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_data.cpp: In member function 'void LAMMPS_NS::ReadData::parse_keyword(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_data.cpp:1966:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if ((blank == strlen(line)) || (line[blank] == '#')) { ^ [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/read_dump.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/read_dump.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_dump.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_dump.cpp: In member function 'LAMMPS_NS::bigint LAMMPS_NS::ReadDump::seek(LAMMPS_NS::bigint, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_dump.cpp:229:10: warning: 'ntimestep' may be used uninitialized in this function [-Wmaybe-uninitialized] bigint ntimestep; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_dump.cpp: In member function 'LAMMPS_NS::bigint LAMMPS_NS::ReadDump::next(LAMMPS_NS::bigint, LAMMPS_NS::bigint, int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_dump.cpp:299:5: warning: 'eofflag' may be used uninitialized in this function [-Wmaybe-uninitialized] if (eofflag) ntimestep = -1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_dump.cpp:271:10: warning: 'ntimestep' may be used uninitialized in this function [-Wmaybe-uninitialized] bigint ntimestep; ^ [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::file_search(char*, char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:630:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if (strlen(&ep->d_name[nbegin]) < n) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::command(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:304:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:308:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&procsperfile,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:311:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:315:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:321:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(buf,sizeof(double),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:381:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:384:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&procsperfile,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:393:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:397:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&n,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:403:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(buf,sizeof(double),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::file_layout()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:1087:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(all_written_send_sizes,sizeof(int),nprocs_file,fp); ^ [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/reader.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/reader.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/reader.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp: In member function 'char* LAMMPS_NS::ReadRestart::read_string()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:1269:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(value,sizeof(char),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::read_int_vec(int, int*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:1281:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(vec,sizeof(int),n,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::read_double_vec(int, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/read_restart.cpp:1292:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(vec,sizeof(double),n,fp); ^ [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/reader_native.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/reader_native.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/reader_native.cpp [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/reader_xyz.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/reader_xyz.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/reader_xyz.cpp [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/region.cpp [ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_block.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_block.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_block.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/region.cpp: In member function 'int LAMMPS_NS::Region::surface(double, double, double, double)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/region.cpp:192:34: warning: 'xorig[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] contact[i].delz = xorig[2] - zs; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/region.cpp:191:34: warning: 'xorig[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] contact[i].dely = xorig[1] - ys; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/region.cpp:190:34: warning: 'xorig[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] contact[i].delx = xorig[0] - xs; ^ [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cone.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cone.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cone.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_block.cpp: In member function 'virtual int LAMMPS_NS::RegBlock::surface_exterior(double*, double)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_block.cpp:336:28: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized] add_contact(0,x,xp,yp,zp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_block.cpp:336:28: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_block.cpp:336:28: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cylinder.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cylinder.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cylinder.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cylinder.cpp: In member function 'virtual int LAMMPS_NS::RegCylinder::surface_exterior(double*, double)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cylinder.cpp:655:30: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized] add_contact(0,x,xp,yp,zp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cylinder.cpp:655:30: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_cylinder.cpp:655:30: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_intersect.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_intersect.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_intersect.cpp [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_plane.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_plane.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_plane.cpp [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_prism.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_prism.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_prism.cpp [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_sphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_sphere.cpp [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_union.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/region_union.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/region_union.cpp [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/replicate.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/replicate.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/replicate.cpp [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/rerun.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/rerun.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/rerun.cpp [ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/reset_ids.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/reset_ids.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/reset_ids.cpp [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/respa.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/respa.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/respa.cpp [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/run.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/run.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/run.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/run.cpp: In member function 'void LAMMPS_NS::Run::command(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/run.cpp:173:41: warning: 'stop' may be used uninitialized in this function [-Wmaybe-uninitialized] if (stopflag) update->endstep = stop; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/run.cpp:171:45: warning: 'start' may be used uninitialized in this function [-Wmaybe-uninitialized] if (startflag) update->beginstep = start; ^ [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/set.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/set.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/set.cpp [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/special.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/special.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/special.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/set.cpp: In member function 'void LAMMPS_NS::Set::set(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/set.cpp:909:35: warning: 'quat' may be used uninitialized in this function [-Wmaybe-uninitialized] quat[1] = xvalue * sintheta2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/set.cpp: In member function 'void LAMMPS_NS::Set::setrandom(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/set.cpp:1137:24: warning: 'quat' may be used uninitialized in this function [-Wmaybe-uninitialized] quat[1] = 0.0; ^ [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/thermo.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/thermo.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/thermo.cpp [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/timer.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/timer.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/timer.cpp [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/universe.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/universe.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/universe.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/universe.cpp: In member function 'void LAMMPS_NS::Universe::add_world(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/universe.cpp:190:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] } else if (strlen(str) == len-1) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/universe.cpp: In member function 'void LAMMPS_NS::Universe::reorder(char*, char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/universe.cpp:149:38: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] MPI_Comm_split(uorig,0,key,&uworld); ^ [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/update.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/update.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/update.cpp [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::special_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:3962:16: warning: unused variable 'xvalue' [-Wunused-variable] double value,xvalue,sy,sxy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::next(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:681:33: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(fp,"%d",&nextindex); ^ [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp: In member function 'void LAMMPS_NS::Velocity::set(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:547:63: warning: 'zvar' may be used uninitialized in this function [-Wmaybe-uninitialized] else input->variable->compute_atom(zvar,igroup,NULL,3,0); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:542:63: warning: 'yvar' may be used uninitialized in this function [-Wmaybe-uninitialized] else input->variable->compute_atom(yvar,igroup,NULL,3,0); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:537:63: warning: 'xvar' may be used uninitialized in this function [-Wmaybe-uninitialized] else input->variable->compute_atom(xvar,igroup,NULL,3,0); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:460:17: warning: 'vz' may be used uninitialized in this function [-Wmaybe-uninitialized] vz *= zscale; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:456:17: warning: 'vy' may be used uninitialized in this function [-Wmaybe-uninitialized] vy *= yscale; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:452:17: warning: 'vx' may be used uninitialized in this function [-Wmaybe-uninitialized] vx *= xscale; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp: In member function 'void LAMMPS_NS::Velocity::ramp(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:650:3: warning: 'v_dim' may be used uninitialized in this function [-Wmaybe-uninitialized] if (v_dim == 2 && domain->dimension == 2) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:672:3: warning: 'coord_dim' may be used uninitialized in this function [-Wmaybe-uninitialized] if (coord_dim == 0) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::group_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:3926:39: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized] } else argstack[nargstack++] = value; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:34:0: /builddir/build/BUILD/lammps-stable_22Aug2018/src/memory.h: In member function 'void LAMMPS_NS::Velocity::create(double, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/memory.h:172:5: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized] sfree(array[0]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/velocity.cpp:168:12: note: 'vhold' was declared here double **vhold; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp: In member function 'double LAMMPS_NS::Variable::evaluate_boolean(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:4688:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized] int op,opprevious,flag1,flag2; ^ [ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/verlet.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/verlet.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/verlet.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::special_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:4000:20: warning: 'nstride' may be used uninitialized in this function [-Wmaybe-uninitialized] int index,nvec,nstride; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:4143:7: warning: 'nvec' may be used uninitialized in this function [-Wmaybe-uninitialized] for (int i = 0; i < nvec; i++) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:4188:5: warning: 'method' may be used uninitialized in this function [-Wmaybe-uninitialized] if (method == SLOPE) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp: In member function 'double LAMMPS_NS::Variable::evaluate(char*, LAMMPS_NS::Variable::Tree**, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:1180:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized] int op,opprevious; ^ [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/write_coeff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/write_coeff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_coeff.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_coeff.cpp: In member function 'void LAMMPS_NS::WriteCoeff::command(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_coeff.cpp:97:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(str,256,one); // coeff ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_coeff.cpp:101:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(str,256,one); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_coeff.cpp:104:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(str,256,one); ^ [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/write_data.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/write_data.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_data.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp: In member function 'void LAMMPS_NS::Variable::compute_atom(int, int, double*, int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:1011:54: warning: 'vstore' may be used uninitialized in this function [-Wmaybe-uninitialized] if (mask[i] & groupbit) result[m] += vstore[i]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::math_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:3678:37: warning: 'value2' may be used uninitialized in this function [-Wmaybe-uninitialized] double value = value1 + value2*(1.0-cos(omega*delta*update->dt)); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:3672:38: warning: 'newtree' may be used uninitialized in this function [-Wmaybe-uninitialized] if (tree) newtree->type = CWIGGLE; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:3375:42: warning: 'value1' may be used uninitialized in this function [-Wmaybe-uninitialized] argstack[nargstack++] = sqrt(value1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp: In member function 'void LAMMPS_NS::Variable::set(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:185:9: warning: 'nfirst' may be used uninitialized in this function [-Wmaybe-uninitialized] int nfirst,nlast; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/variable.cpp:206:22: warning: 'nlast' may be used uninitialized in this function [-Wmaybe-uninitialized] num[nvar] = nlast; ^ [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/write_dump.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/write_dump.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_dump.cpp [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/write_restart.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/write_restart.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_restart.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_dump.cpp: In member function 'void LAMMPS_NS::WriteDump::command(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/write_dump.cpp:84:16: warning: 'dump' may be used uninitialized in this function [-Wmaybe-uninitialized] dump->write(); ^ [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_erotate_asphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_erotate_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_erotate_asphere.cpp [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_temp_asphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_temp_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_temp_asphere.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_erotate_asphere.cpp: In member function 'virtual double LAMMPS_NS::ComputeERotateAsphere::compute_scalar()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_erotate_asphere.cpp:139:35: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertia[0] = tbonus[tri[i]].inertia[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_erotate_asphere.cpp:130:32: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] length = lbonus[line[i]].length; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/compute_erotate_asphere.cpp:109:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nh_asphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nh_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nh_asphere.cpp [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nph_asphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nph_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nph_asphere.cpp [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_npt_asphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_npt_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_npt_asphere.cpp [ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_asphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_asphere.cpp [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_asphere_noforce.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_asphere_noforce.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_asphere_noforce.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_asphere_noforce.cpp: In member function 'virtual void LAMMPS_NS::FixNVEAsphereNoforce::initial_integrate(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_asphere_noforce.cpp:94:33: warning: 'bonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = bonus[ellipsoid[i]].shape; ^ [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_line.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_line.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_line.cpp [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_tri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nve_tri.cpp [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nvt_asphere.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nvt_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/fix_nvt_asphere.cpp [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_line_lj.cpp.o /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:467:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setwell[i],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:470:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&well[i][0],sizeof(double),3,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:474:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:478:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:479:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:480:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:512:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&gamma,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:513:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&upsilon,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:514:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mu,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:515:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:516:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:517:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_line_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_line_lj.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp: In member function 'double LAMMPS_NS::PairGayBerne::gayberne_analytic(int, int, double (*)[3], double (*)[3], double (*)[3], double (*)[3], double (*)[3], double (*)[3], double*, double, double*, double*, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:730:36: warning: 'deta2[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:729:36: warning: 'deta2[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:728:36: warning: 'deta2[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:730:21: warning: 'dchi2[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:729:21: warning: 'dchi2[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:728:21: warning: 'dchi2[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:730:51: warning: '*((void*)& dUr2 +16)' may be used uninitialized in this function [-Wmaybe-uninitialized] rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:729:51: warning: '*((void*)& dUr2 +8)' may be used uninitialized in this function [-Wmaybe-uninitialized] rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:728:51: warning: 'dUr2' may be used uninitialized in this function [-Wmaybe-uninitialized] rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_line_lj.cpp: In member function 'virtual void LAMMPS_NS::PairLineLJ::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_line_lj.cpp:308:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl,0.0,fpair,delx,dely,delz); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_gayberne.cpp:220:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized] if (eflag) evdwl = factor_lj*one_eng; ^ [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_tri_lj.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_tri_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_tri_lj.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp:445:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setwell[i],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp:448:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&well[i][0],sizeof(double),3,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp:452:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp:456:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp:457:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp:458:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp:486:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp:487:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_tri_lj.cpp: In member function 'virtual void LAMMPS_NS::PairTriLJ::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_tri_lj.cpp:382:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl,0.0,fpair,delx,dely,delz); ^ [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_nparticle.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_nparticle.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_nparticle.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE/pair_resquared.cpp:195:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized] if (eflag) evdwl = factor_lj*one_eng; ^ [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polygon.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polygon.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polygon.cpp [ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp: In member function 'int LAMMPS_NS::BodyRoundedPolyhedron::nedges(LAMMPS_NS::AtomVecBody::Bonus*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp:99:7: warning: unused variable 'nfaces' [-Wunused-variable] int nfaces = bonus->ivalue[2]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp: In member function 'virtual int LAMMPS_NS::BodyRoundedPolyhedron::image(int, double, double, int*&, double**&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp:491:9: warning: unused variable 'nfaces' [-Wunused-variable] int nfaces = bonus->ivalue[2]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp:466:7: warning: unused variable 'j' [-Wunused-variable] int j, nelements; ^ [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/compute_body_local.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/compute_body_local.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/compute_body_local.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::BodyRoundedPolyhedron::data_body(int, int, int, int*, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/body_rounded_polyhedron.cpp:213:7: warning: 'nedges' may be used uninitialized in this function [-Wmaybe-uninitialized] int nedges,nentries; ^ [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/compute_temp_body.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/compute_temp_body.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/compute_temp_body.cpp [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nh_body.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nh_body.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nh_body.cpp [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nph_body.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nph_body.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nph_body.cpp [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_npt_body.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_npt_body.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_npt_body.cpp [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nve_body.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nve_body.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nve_body.cpp [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nvt_body.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nvt_body.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_nvt_body.cpp [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp: In member function 'virtual void LAMMPS_NS::FixWallBodyPolygon::post_force(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:313:14: warning: unused variable 'r' [-Wunused-variable] double r = sqrt(rsq); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:314:14: warning: unused variable 'rsqinv' [-Wunused-variable] double rsqinv = 1.0 / rsq; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:338:11: warning: variable 'interact' set but not used [-Wunused-but-set-variable] int interact, num_contacts, done; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:209:59: warning: variable 'rradi' set but not used [-Wunused-but-set-variable] double vwall[3],dx,dy,dz,del1,del2,delxy,delr,rsq,eradi,rradi,wall_pos; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp: In member function 'int LAMMPS_NS::FixWallBodyPolygon::vertex_against_wall(int, double, double**, double**, double**, int, LAMMPS_NS::FixWallBodyPolygon::Contact*, int&, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:502:24: warning: unused variable 'p2vertex' [-Wunused-variable] int mode, contact, p2vertex; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:503:25: warning: unused variable 't' [-Wunused-variable] double d, R, hi[3], t, delx, dely, delz, fpair, shift; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:503:53: warning: unused variable 'shift' [-Wunused-variable] double d, R, hi[3], t, delx, dely, delz, fpair, shift; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:504:12: warning: unused variable 'xj' [-Wunused-variable] double xj[3], rij; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:481:18: warning: unused variable 'xpj' [-Wunused-variable] double xpi[3], xpj[3], dist, eradi, rradi; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:481:26: warning: unused variable 'dist' [-Wunused-variable] double xpi[3], xpj[3], dist, eradi, rradi; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:481:32: warning: variable 'eradi' set but not used [-Wunused-but-set-variable] double xpi[3], xpj[3], dist, eradi, rradi; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:482:22: warning: unused variable 'rx' [-Wunused-variable] double fx, fy, fz, rx, ry, rz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:482:26: warning: unused variable 'ry' [-Wunused-variable] double fx, fy, fz, rx, ry, rz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:482:30: warning: unused variable 'rz' [-Wunused-variable] double fx, fy, fz, rx, ry, rz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:483:7: warning: unused variable 'nlocal' [-Wunused-variable] int nlocal = atom->nlocal; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp: In member function 'void LAMMPS_NS::FixWallBodyPolygon::contact_forces(LAMMPS_NS::FixWallBodyPolygon::Contact&, double, double**, double**, double**, double**, double**, double*, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:674:28: warning: unused variable 'jefirst' [-Wunused-variable] int ibody,ibonus,ifirst, jefirst, ni; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::FixWallBodyPolyhedron::post_force(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:328:14: warning: unused variable 'r' [-Wunused-variable] double r = sqrt(rsq); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:329:14: warning: unused variable 'rsqinv' [-Wunused-variable] double rsqinv = 1.0 / rsq; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:362:11: warning: variable 'interact' set but not used [-Wunused-but-set-variable] int interact, num_contacts, done; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:362:35: warning: unused variable 'done' [-Wunused-variable] int interact, num_contacts, done; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:363:14: warning: unused variable 'delta_a' [-Wunused-variable] double delta_a, delta_ua, j_a; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:363:23: warning: unused variable 'delta_ua' [-Wunused-variable] double delta_a, delta_ua, j_a; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:363:33: warning: unused variable 'j_a' [-Wunused-variable] double delta_a, delta_ua, j_a; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:216:38: warning: unused variable 'delxy' [-Wunused-variable] double vwall[3],dx,dy,dz,del1,del2,delxy,delr,rsq,eradi,rradi,wall_pos; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:216:44: warning: unused variable 'delr' [-Wunused-variable] double vwall[3],dx,dy,dz,del1,del2,delxy,delr,rsq,eradi,rradi,wall_pos; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:216:53: warning: variable 'eradi' set but not used [-Wunused-but-set-variable] double vwall[3],dx,dy,dz,del1,del2,delxy,delr,rsq,eradi,rradi,wall_pos; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:216:59: warning: variable 'rradi' set but not used [-Wunused-but-set-variable] double vwall[3],dx,dy,dz,del1,del2,delxy,delr,rsq,eradi,rradi,wall_pos; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:217:35: warning: variable 'nfi' set but not used [-Wunused-but-set-variable] int i,ni,npi,ifirst,nei,iefirst,nfi,iffirst,side; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:217:39: warning: variable 'iffirst' set but not used [-Wunused-but-set-variable] int i,ni,npi,ifirst,nei,iefirst,nfi,iffirst,side; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp: In member function 'int LAMMPS_NS::FixWallBodyPolyhedron::edge_against_wall(int, double, int, double*, double**, double**, double**, LAMMPS_NS::FixWallBodyPolyhedron::Contact*, int&, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:551:16: warning: variable 'mode' set but not used [-Wunused-but-set-variable] int ni, nei, mode, contact; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:553:7: warning: unused variable 'nlocal' [-Wunused-variable] int nlocal = atom->nlocal; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp: In member function 'void LAMMPS_NS::FixWallBodyPolyhedron::contact_forces(int, double, double*, double*, double, double, double, double, double, double, double**, double**, double**, double**, double**, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:705:14: warning: unused variable 'jbonus' [-Wunused-variable] int ibonus,jbonus; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:708:28: warning: unused variable 'vj' [-Wunused-variable] double fn[3],ft[3],vi[3],vj[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp: In member function 'void LAMMPS_NS::FixWallBodyPolyhedron::contact_forces(LAMMPS_NS::FixWallBodyPolyhedron::Contact&, double, double**, double**, double**, double**, double**, double*, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:790:28: warning: unused variable 'jefirst' [-Wunused-variable] int ibody,ibonus,ifirst, jefirst, ni; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp: In member function 'virtual void LAMMPS_NS::FixWallBodyPolygon::post_force(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:345:71: warning: 'wall_pos' may be used uninitialized in this function [-Wmaybe-uninitialized] contact_list, num_contacts, facc); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polygon.cpp:303:9: warning: 'eradi' may be used uninitialized in this function [-Wmaybe-uninitialized] if (delr > eradi) dz = cylradius; ^ [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_nparticle.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_nparticle.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_nparticle.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::FixWallBodyPolyhedron::post_force(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/fix_wall_body_polyhedron.cpp:342:79: warning: 'wall_pos' may be used uninitialized in this function [-Wmaybe-uninitialized] sphere_against_wall(i, wall_pos, side, vwall, x, v, f, angmom, torque); ^ [ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolygon::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:247:11: warning: variable 'interact' set but not used [-Wunused-but-set-variable] int interact, num_contacts, done; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:108:46: warning: unused variable 'fx' [-Wunused-variable] double xtmp,ytmp,ztmp,delx,dely,delz,evdwl,fx,fy,fz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:108:49: warning: unused variable 'fy' [-Wunused-variable] double xtmp,ytmp,ztmp,delx,dely,delz,evdwl,fx,fy,fz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:108:52: warning: unused variable 'fz' [-Wunused-variable] double xtmp,ytmp,ztmp,delx,dely,delz,evdwl,fx,fy,fz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:109:14: warning: variable 'rsqinv' set but not used [-Wunused-but-set-variable] double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:109:33: warning: variable 'eradi' set but not used [-Wunused-but-set-variable] double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:109:39: warning: variable 'eradj' set but not used [-Wunused-but-set-variable] double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:109:45: warning: variable 'rradi' set but not used [-Wunused-but-set-variable] double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:109:51: warning: variable 'rradj' set but not used [-Wunused-but-set-variable] double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:110:10: warning: unused variable 'xi' [-Wunused-variable] double xi[3],xj[3],fi[3],fj[3],ti[3],tj[3],facc[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:110:16: warning: unused variable 'xj' [-Wunused-variable] double xi[3],xj[3],fi[3],fj[3],ti[3],tj[3],facc[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:110:22: warning: unused variable 'fi' [-Wunused-variable] double xi[3],xj[3],fi[3],fj[3],ti[3],tj[3],facc[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:110:28: warning: unused variable 'fj' [-Wunused-variable] double xi[3],xj[3],fi[3],fj[3],ti[3],tj[3],facc[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:110:34: warning: unused variable 'ti' [-Wunused-variable] double xi[3],xj[3],fi[3],fj[3],ti[3],tj[3],facc[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:110:40: warning: unused variable 'tj' [-Wunused-variable] double xi[3],xj[3],fi[3],fj[3],ti[3],tj[3],facc[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:111:11: warning: unused variable 'dxi' [-Wunused-variable] double *dxi,*dxj; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:111:16: warning: unused variable 'dxj' [-Wunused-variable] double *dxi,*dxj; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolygon::sphere_against_sphere(int, int, double, double, double, double, double, double, double**, double**, double**, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:604:10: warning: variable 'eradi' set but not used [-Wunused-but-set-variable] double eradi,eradj,rradi,rradj; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:604:16: warning: variable 'eradj' set but not used [-Wunused-but-set-variable] double eradi,eradj,rradi,rradj; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:606:32: warning: variable 'fn' set but not used [-Wunused-but-set-variable] double rij,rsqinv,R,fx,fy,fz,fn[3],ft[3],fpair,shift,energy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:606:38: warning: variable 'ft' set but not used [-Wunused-but-set-variable] double rij,rsqinv,R,fx,fy,fz,fn[3],ft[3],fpair,shift,energy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp: In member function 'int LAMMPS_NS::PairBodyRoundedPolygon::vertex_against_edge(int, int, double, double, double**, double**, double**, LAMMPS_NS::tagint*, LAMMPS_NS::PairBodyRoundedPolygon::Contact*, int&, double&, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:761:12: warning: unused variable 'xj' [-Wunused-variable] double xj[3], rij; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:709:24: warning: variable 'nei' set but not used [-Wunused-but-set-variable] int ni, npi, ifirst, nei, iefirst; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:709:29: warning: variable 'iefirst' set but not used [-Wunused-but-set-variable] int ni, npi, ifirst, nei, iefirst; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:710:11: warning: variable 'npj' set but not used [-Wunused-but-set-variable] int nj, npj, jfirst, nej, jefirst; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:711:32: warning: variable 'eradi' set but not used [-Wunused-but-set-variable] double xpi[3], xpj[3], dist, eradi, eradj, rradi, rradj; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:712:22: warning: unused variable 'rx' [-Wunused-variable] double fx, fy, fz, rx, ry, rz, energy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:712:26: warning: unused variable 'ry' [-Wunused-variable] double fx, fy, fz, rx, ry, rz, energy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:712:30: warning: unused variable 'rz' [-Wunused-variable] double fx, fy, fz, rx, ry, rz, energy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:714:7: warning: unused variable 'nlocal' [-Wunused-variable] int nlocal = atom->nlocal; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_nparticle.cpp: In member function 'virtual void LAMMPS_NS::PairBodyNparticle::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_nparticle.cpp:328:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl,0.0,fpair,delx,dely,delz); ^ [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolygon::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:107:15: warning: 'iefirst' may be used uninitialized in this function [-Wmaybe-uninitialized] int nei,nej,iefirst,jefirst; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:235:7: warning: 'nei' may be used uninitialized in this function [-Wmaybe-uninitialized] for (ni = 0; ni < nei; ni++) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:106:21: warning: 'ifirst' may be used uninitialized in this function [-Wmaybe-uninitialized] int ni,nj,npi,npj,ifirst,jfirst; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polygon.cpp:223:7: warning: 'npi' may be used uninitialized in this function [-Wmaybe-uninitialized] for (ni = 0; ni < npi; ni++) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolyhedron::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:278:11: warning: variable 'interact' set but not used [-Wunused-but-set-variable] int interact, num_contacts; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolyhedron::sphere_against_sphere(int, int, int, int, double, double, double, double, double**, double**, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:606:50: warning: unused variable 'shift' [-Wunused-variable] double rij,rsqinv,R,fx,fy,fz,fn[3],ft[3],fpair,shift,energy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolyhedron::sphere_against_edge(int, int, int, int, double**, double**, double**, double**, double**, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:688:57: warning: unused variable 'shift' [-Wunused-variable] double delx,dely,delz,rsq,rij,rsqinv,R,fx,fy,fz,fpair,shift,energy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolyhedron::sphere_against_face(int, int, int, int, double**, double**, double**, double**, double**, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:838:57: warning: unused variable 'shift' [-Wunused-variable] double delx,dely,delz,rsq,rij,rsqinv,R,fx,fy,fz,fpair,shift,energy; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'int LAMMPS_NS::PairBodyRoundedPolyhedron::edge_against_edge(int, int, int, int, double**, LAMMPS_NS::PairBodyRoundedPolyhedron::Contact*, int&, double&, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:991:21: warning: unused variable 'contact' [-Wunused-variable] int ni,nei,nj,nej,contact,interact; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'int LAMMPS_NS::PairBodyRoundedPolyhedron::edge_against_face(int, int, int, int, double**, LAMMPS_NS::PairBodyRoundedPolyhedron::Contact*, int&, double&, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:1048:21: warning: unused variable 'contact' [-Wunused-variable] int ni,nei,nj,nfj,contact,interact; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'int LAMMPS_NS::PairBodyRoundedPolyhedron::interaction_edge_to_edge(int, int, double*, double, int, int, double*, double, int, int, double, LAMMPS_NS::PairBodyRoundedPolyhedron::Contact*, int&, double&, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:1121:24: warning: unused variable 'shift' [-Wunused-variable] double contact_dist, shift; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'int LAMMPS_NS::PairBodyRoundedPolyhedron::interaction_face_to_edge(int, int, double*, double, int, int, double*, double, int, int, double, LAMMPS_NS::PairBodyRoundedPolyhedron::Contact*, int&, double&, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:1317:48: warning: unused variable 'shift' [-Wunused-variable] double hi1[3], hi2[3], d1, d2, contact_dist, shift; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolyhedron::sanity_check()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:2348:22: warning: variable 'x3' set but not used [-Wunused-but-set-variable] double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b,u[3],v[3],n[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:2348:28: warning: variable 'x4' set but not used [-Wunused-but-set-variable] double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b,u[3],v[3],n[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:2348:56: warning: unused variable 'u' [-Wunused-variable] double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b,u[3],v[3],n[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:2348:61: warning: unused variable 'v' [-Wunused-variable] double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b,u[3],v[3],n[3]; ^ [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:2348:66: warning: unused variable 'n' [-Wunused-variable] double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b,u[3],v[3],n[3]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:2350:7: warning: unused variable 'inside_a' [-Wunused-variable] int inside_a, inside_b; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:2350:17: warning: unused variable 'inside_b' [-Wunused-variable] int inside_a, inside_b; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp: In member function 'virtual void LAMMPS_NS::AngleClass2::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:376:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&theta0[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:377:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k2[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:378:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k3[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:379:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k4[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:381:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bb_k[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:382:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bb_r1[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:383:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bb_r2[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:385:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ba_k1[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:386:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ba_k2[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:387:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ba_r1[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/angle_class2.cpp:388:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ba_r2[1],sizeof(double),atom->nangletypes,fp); ^ [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/bond_class2.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/bond_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/bond_class2.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/bond_class2.cpp: In member function 'virtual void LAMMPS_NS::BondClass2::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/bond_class2.cpp:187:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/bond_class2.cpp:188:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k2[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/bond_class2.cpp:189:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k3[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/bond_class2.cpp:190:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k4[1],sizeof(double),atom->nbondtypes,fp); ^ [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolyhedron::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:222:21: warning: 'eradi' may be used uninitialized in this function [-Wmaybe-uninitialized] if (r > eradi + eradj + cut_inner) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:124:43: warning: 'iefirst' may be used uninitialized in this function [-Wmaybe-uninitialized] int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:248:7: warning: 'nei' may be used uninitialized in this function [-Wmaybe-uninitialized] for (ni = 0; ni < nei; ni++) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:124:21: warning: 'ifirst' may be used uninitialized in this function [-Wmaybe-uninitialized] int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY/pair_body_rounded_polyhedron.cpp:234:7: warning: 'npi' may be used uninitialized in this function [-Wmaybe-uninitialized] for (ni = 0; ni < npi; ni++) { ^ [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp: In member function 'virtual void LAMMPS_NS::DihedralClass2::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:840:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:841:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:842:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k3[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:843:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&phi1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:844:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&phi2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:845:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&phi3[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:847:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mbt_f1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:848:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mbt_f2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:849:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mbt_f3[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:850:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mbt_r0[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:852:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ebt_f1_1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:853:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ebt_f2_1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:854:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ebt_f3_1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:855:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ebt_r0_1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:857:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ebt_f1_2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:858:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ebt_f2_2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:859:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ebt_f3_2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:860:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ebt_r0_2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:862:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&at_f1_1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:863:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&at_f2_1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:864:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&at_f3_1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:865:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&at_theta0_1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:867:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&at_f1_2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:868:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&at_f2_2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:869:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&at_f3_2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:870:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&at_theta0_2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:872:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aat_k[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:873:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aat_theta0_1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:874:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aat_theta0_2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:876:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bb13t_k[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:877:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bb13t_r10[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/dihedral_class2.cpp:878:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bb13t_r30[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp: In member function 'virtual void LAMMPS_NS::ImproperClass2::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp:609:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k0[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp:610:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&chi0[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp:612:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aa_k1[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp:613:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aa_k2[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp:614:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aa_k3[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp:615:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aa_theta0_1[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp:616:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aa_theta0_2[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp:617:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aa_theta0_3[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp: In member function 'void LAMMPS_NS::ImproperClass2::angleangle(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/improper_class2.cpp:825:58: warning: 'eimproper' may be used uninitialized in this function [-Wmaybe-uninitialized] delxBD-delxBC,delyBD-delyBC,delzBD-delzBC); ^ [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp:310:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp:314:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp:315:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp:316:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp:345:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp:346:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp:347:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2.cpp:348:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:364:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:368:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:369:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:370:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:371:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:401:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:402:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:403:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:404:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:405:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulCut::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:462:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:462:37: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:144:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:144:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:406:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:410:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:411:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:412:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:443:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:444:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:445:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:446:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:447:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:448:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:449:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulLong::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:538:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:538:37: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:531:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:531:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:534:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:529:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*erfc; ^ [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/fix_wall_colloid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/fix_wall_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/fix_wall_colloid.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:177:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:182:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:185:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:185:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:179:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2/pair_lj_class2_coul_long.cpp:179:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian_poly.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian_poly.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:610:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:614:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:615:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:650:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mu,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:651:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flaglog,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:652:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flagfld,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:653:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:654:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:655:42: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&t_target, sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:656:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&seed, sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:657:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:658:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:659:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flagHI,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:660:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flagVF,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian_poly.cpp: In member function 'virtual void LAMMPS_NS::PairBrownianPoly::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian_poly.cpp:296:42: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized] Fbmag = prethermostat*sqrt(a_pu); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian_poly.cpp:245:42: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized] Fbmag = prethermostat*sqrt(a_sh); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:309:42: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized] Fbmag = prethermostat*sqrt(a_pu); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_brownian.cpp:241:42: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized] Fbmag = prethermostat*sqrt(a_sh); ^ [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:401:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (comm->me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:405:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a12[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:406:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:407:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&d1[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:408:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&d2[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:409:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:439:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:440:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:441:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp: In member function 'virtual void LAMMPS_NS::PairLubricate::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:690:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:694:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:695:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp: In member function 'virtual void LAMMPS_NS::PairLubricate::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:728:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mu,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:729:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flaglog,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:730:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flagfld,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:731:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:732:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:733:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:734:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:735:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flagHI,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate.cpp:736:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flagVF,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp: In member function 'virtual double LAMMPS_NS::PairColloid::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:544:20: warning: 'phi' may be used uninitialized in this function [-Wmaybe-uninitialized] return factor_lj*phi; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_colloid.cpp:195:22: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] f[i][2] += delz*fpair; ^ [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU_poly.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU_poly.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp: In member function 'virtual void LAMMPS_NS::PairLubricateU::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1917:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1921:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1922:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp: In member function 'virtual void LAMMPS_NS::PairLubricateU::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1954:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mu,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1955:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flaglog,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1956:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_inner_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1957:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1958:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1959:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1960:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flagHI,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricateU.cpp:1961:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&flagVF,sizeof(int),1,fp); ^ [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate_poly.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_lubricate_poly.cpp [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_yukawa_colloid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_yukawa_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID/pair_yukawa_colloid.cpp [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/atom_vec_dipole.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/atom_vec_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/atom_vec_dipole.cpp [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:441:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:445:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:446:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:447:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:448:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:477:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:478:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:479:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:480:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:240:34: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += qtmp*r3inv*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:238:35: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += -q[j]*r3inv*pidotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:236:29: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:236:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:240:28: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += qtmp*r3inv*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:245:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp [ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:495:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:499:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:500:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:501:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:529:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:530:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:531:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:532:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:297:70: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:297:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:297:54: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:294:47: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:294:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:294:31: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:297:70: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:297:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:297:54: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:302:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongDipoleLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:351:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:355:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:356:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:357:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongDipoleLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:386:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:387:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:388:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:389:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:390:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ewald_order,sizeof(int),1,fp); ^ [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_freeze.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_freeze.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_freeze.cpp [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_pour.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_pour.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_pour.cpp [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_wall_gran.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_wall_gran.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_wall_gran.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_wall_gran.cpp: In member function 'void LAMMPS_NS::FixWallGran::bonded_history(double, double, double, double, double*, double, double*, double*, double*, double*, double, double, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_wall_gran.cpp:797:56: warning: variable 'vrlmaginv' set but not used [-Wunused-but-set-variable] double relrot1,relrot2,relrot3,vrl1,vrl2,vrl3,vrlmag,vrlmaginv; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_pour.cpp: In member function 'virtual void LAMMPS_NS::FixPour::pre_exchange()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_pour.cpp:676:42: warning: 'natom' may be used uninitialized in this function [-Wmaybe-uninitialized] int ninserted_mols = ninserted_atoms / natom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_pour.cpp:692:35: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] atom->nbonds += onemols[imol]->nbonds * ninserted_mols; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_pour.cpp:650:65: warning: 'denstmp' may be used uninitialized in this function [-Wmaybe-uninitialized] atom->rmass[n] = 4.0*MY_PI/3.0 * radtmp*radtmp*radtmp * denstmp; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_pour.cpp:499:30: warning: 'radtmp' may be used uninitialized in this function [-Wmaybe-uninitialized] coords[0][3] = radtmp; ^ [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_wall_gran_region.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_wall_gran_region.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/fix_wall_gran_region.cpp [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hertz_history.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hertz_history.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hertz_history.cpp [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke.cpp [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp: In member function 'virtual void LAMMPS_NS::PairGranHookeHistory::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp:540:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp: In member function 'virtual void LAMMPS_NS::PairGranHookeHistory::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp:566:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&kn,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp:567:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&kt,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp:568:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&gamman,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp:569:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&gammat,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp:570:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&xmu,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR/pair_gran_hooke_history.cpp:571:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&dampflag,sizeof(int),1,fp); ^ [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/ewald.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/ewald.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/ewald.cpp [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/ewald_disp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/ewald_disp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/ewald_disp.cpp [ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d.cpp: In function 'void fft_3d(double (*)[2], double (*)[2], int, fft_plan_3d*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d.cpp:69:9: warning: variable 'total' set but not used [-Wunused-but-set-variable] int i,total,length,offset,num; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d.cpp:69:15: warning: variable 'length' set but not used [-Wunused-but-set-variable] int i,total,length,offset,num; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d.cpp:69:22: warning: unused variable 'offset' [-Wunused-variable] int i,total,length,offset,num; ^ [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d_wrap.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d_wrap.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fft3d_wrap.cpp [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fix_tune_kspace.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fix_tune_kspace.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/fix_tune_kspace.cpp [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/gridcomm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/gridcomm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/gridcomm.cpp [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm_cg.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm_cg.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm_cg.cpp [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:427:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:431:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:432:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&rho[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:433:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:434:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&c[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:435:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&d[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:436:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:470:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:471:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:472:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:473:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:474:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:475:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:476:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulLong::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:568:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:569:28: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] d[itype][jtype]*r2inv*r6inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:561:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:561:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:564:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:559:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:191:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:183:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:188:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:192:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:185:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_long.cpp:185:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp: In member function 'virtual void LAMMPS_NS::MSM::direct(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1640:47: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v5sum += v5_directn[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1639:47: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v4sum += v4_directn[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1638:47: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v3sum += v3_directn[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1637:47: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v2sum += v2_directn[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1636:47: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v1sum += v1_directn[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1635:47: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v0sum += v0_directn[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp: In member function 'void LAMMPS_NS::MSM::direct_top(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1995:50: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v5sum += v5_direct_top[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1994:50: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v4sum += v4_direct_top[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1993:50: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v3sum += v3_direct_top[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1992:50: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v2sum += v2_direct_top[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1991:50: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v1sum += v1_direct_top[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/msm.cpp:1990:50: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized] v0sum += v0_direct_top[k] * qtmp2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulMSM::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp:189:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp:186:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp:185:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp:190:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulMSM::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp:248:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp:249:28: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] d[itype][jtype]*r2inv*r6inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp:244:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_born_coul_msm.cpp:243:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*egamma; ^ [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:404:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:408:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:409:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&rho[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:410:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&c[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:411:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:443:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:444:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:445:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:446:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:447:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:448:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:449:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulLong::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:539:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:539:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:532:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:532:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:535:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:530:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:184:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:176:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:181:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:184:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:178:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_long.cpp:178:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulMSM::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp:185:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp:182:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp:181:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp:185:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulMSM::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp:243:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp:243:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp:239:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_coul_msm.cpp:238:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*egamma; ^ [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp [ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckLongCoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:360:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:364:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&buck_a_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:365:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&buck_rho_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:366:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&buck_c_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:367:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_buck_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckLongCoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:399:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_buck_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:400:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:401:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:402:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:403:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:404:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_buck_long_coul_long.cpp:405:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ewald_order,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:297:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:300:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&scale[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:326:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:327:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:328:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:329:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:330:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairCoulLong::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:377:29: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:379:26: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:379:38: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:377:29: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:161:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:166:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:163:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_long.cpp:163:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairCoulMSM::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp:152:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp:147:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp:149:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp:149:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairCoulMSM::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp:207:31: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp:209:26: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp:209:38: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_coul_msm.cpp:207:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*egamma; ^ [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:830:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:834:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:835:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:836:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&eps14[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:837:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma14[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:869:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_inner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:870:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:871:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:872:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:873:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:874:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:875:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulLong::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:974:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:966:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:966:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:969:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:964:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulMSM::compute_outer(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:387:39: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:415:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * fgamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:387:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:421:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = ptable[itable] + fraction*dptable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:418:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = vtable[itable] + fraction*dvtable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::compute_outer(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:549:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * (erfc + EWALD_F*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:521:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:549:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * (erfc + EWALD_F*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:549:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * (erfc + EWALD_F*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:555:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = ptable[itable] + fraction*dptable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:552:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = vtable[itable] + fraction*dvtable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulMSM::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:524:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:516:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:516:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:519:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:514:33: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:197:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:202:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:206:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:199:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:199:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:206:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulMSM::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:217:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:212:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:221:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:214:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:214:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:221:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:900:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:904:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:905:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:906:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&eps14[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:907:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma14[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:939:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_inner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:940:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:941:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:942:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:943:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:944:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:945:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmfswCoulLong::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1053:34: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj6 = -lj4[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1048:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1036:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1036:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1039:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1034:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:800:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:804:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:805:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:806:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:837:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:838:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:839:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:840:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:841:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:842:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:843:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::compute_outer(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:611:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * (erfc + EWALD_F*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:573:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:611:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * (erfc + EWALD_F*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:611:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * (erfc + EWALD_F*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:633:76: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] forcelj = r6inv * (lj1[itype][jtype]*r6inv - lj2[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:590:27: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] rinv = 1.0/r; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:617:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = ptable[itable] + fraction*dptable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:614:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = vtable[itable] + fraction*dvtable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:219:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:224:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:240:42: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl6 = -lj4[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:221:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:221:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:238:47: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl12 = r6inv*lj3[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulLong::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:934:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:926:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:926:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:929:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:924:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::compute_outer(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:537:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * (erfc + EWALD_F*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:513:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:537:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * (erfc + EWALD_F*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:537:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * (erfc + EWALD_F*grij*expm2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:543:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = ptable[itable] + fraction*dptable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:540:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = vtable[itable] + fraction*dvtable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:183:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:188:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:192:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:185:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_long.cpp:185:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulMSM::compute_outer(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:366:39: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:390:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized] forcecoul = prefactor * fgamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:366:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:396:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = ptable[itable] + fraction*dptable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:393:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = vtable[itable] + fraction*dvtable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:537:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeO,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:538:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeH,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:539:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeB,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:540:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeA,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:541:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&qdist,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:543:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:544:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:545:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:546:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:547:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:548:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:549:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulMSM::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:476:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:468:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:468:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:471:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:466:33: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulMSM::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:209:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:204:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:213:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:206:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:206:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:415:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:420:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:417:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:410:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:409:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:337:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:333:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:417:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongCoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:360:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:364:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:365:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:366:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_read[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongCoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:397:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:398:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:399:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:400:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:401:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:402:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_coul_long.cpp:403:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ewald_order,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1549:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeO,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1550:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeH,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1551:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeB,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1552:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeA,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1553:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&qdist,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1555:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1556:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1557:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1558:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1559:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1560:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_middle()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:980:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:976:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:949:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:945:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:451:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:456:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:453:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:446:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:445:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:373:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:369:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:453:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_inner()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:719:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:715:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:688:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:684:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_outer(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1422:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1421:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1323:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1319:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:476:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeO,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:477:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeH,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:478:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeB,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:479:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeA,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:480:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&qdist,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:383:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:388:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:385:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:378:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:377:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:305:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:301:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pair_tip4p_long.cpp:385:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm.cpp [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_cg.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_cg.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_cg.cpp [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_disp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_disp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_disp.cpp [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_disp_tip4p.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_disp_tip4p.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_disp_tip4p.cpp [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_stagger.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_stagger.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_stagger.cpp [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_tip4p.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_tip4p.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/pppm_tip4p.cpp [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/remap.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/remap.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/remap.cpp [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/remap_wrap.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/remap_wrap.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE/remap_wrap.cpp [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/fix_qeq_comb.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/fix_qeq_comb.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/fix_qeq_comb.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/fix_qeq_comb.cpp: In member function 'virtual void LAMMPS_NS::FixQEQComb::post_force(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/fix_qeq_comb.cpp:262:20: warning: 'ilist' may be used uninitialized in this function [-Wmaybe-uninitialized] i = ilist[ii]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/fix_qeq_comb.cpp:224:5: warning: 'inum' may be used uninitialized in this function [-Wmaybe-uninitialized] for (ii = 0; ii < inum; ii++) { ^ [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp: In member function 'void LAMMPS_NS::PairADP::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp:564:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp:565:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp:566:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp:567:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp:592:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp:616:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp: In member function 'void LAMMPS_NS::PairADP::grab(FILE*, int, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp:928:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp: In member function 'void LAMMPS_NS::PairADP::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_adp.cpp:629:57: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized] if (me == 0) grab(fp,file->nr,&file->z2r[i][j][1]); ^ [ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3385:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3391:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3393:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3395:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3397:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3399:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3401:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3403:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3405:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3407:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3409:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3411:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3413:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3415:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3417:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3419:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3421:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3423:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3425:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3427:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3429:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3431:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3433:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3435:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3437:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3439:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3441:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3443:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3445:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3447:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3449:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3451:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3453:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3455:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3457:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3459:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3461:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3463:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3465:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3467:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3469:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3471:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3473:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3475:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3477:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3482:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3484:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3486:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3488:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3490:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3492:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3494:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3496:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3498:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3500:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3502:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3504:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3506:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3508:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3510:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3512:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3514:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3516:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3518:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3520:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3522:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3527:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3529:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3531:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3533:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3535:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3537:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3539:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3541:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3543:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3550:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3551:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3552:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3556:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3560:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3563:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3566:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3570:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3573:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3580:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3581:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3582:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3584:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3588:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3592:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3596:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3603:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3604:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3605:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3607:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3612:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3616:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3621:30: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3629:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3630:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3631:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3632:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3637:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3641:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3646:30: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3654:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3655:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3656:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3658:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3663:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3667:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3673:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3682:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3683:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3684:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3686:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3691:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3695:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3701:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3710:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3711:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3712:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3714:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3719:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3723:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3729:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3738:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3739:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3740:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3742:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3747:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3751:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3757:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::TORSION(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:1244:64: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] ev_tally4(i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::Spbicubic(double, double, double*, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:4025:49: warning: 'yn1' may be used uninitialized in this function [-Wmaybe-uninitialized] if (j > 0) df[1] += c * ((double) j) * xn * yn1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::Sptricubic(double, double, double, double*, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:4065:46: warning: 'zn1' may be used uninitialized in this function [-Wmaybe-uninitialized] if (k > 0) df[2] += c * kr * xn * yn * zn1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::piRCSpline(double, double, double, int, int, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo.cpp:3286:10: warning: 'piRC' may be used uninitialized in this function [-Wmaybe-uninitialized] return piRC; ^ [ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo_morse.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_airebo_morse.cpp [ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_bop.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_bop.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_bop.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_bop.cpp: In member function 'void LAMMPS_NS::PairBOP::read_table(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_bop.cpp:4991:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for(j=0;jnr,&file->z2r[i][j][1]); ^ [ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_cd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_cd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_cd.cpp [ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_cd.cpp: In member function 'virtual void LAMMPS_NS::PairEAMCD::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_cd.cpp:388:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair += D_i * rhojp * t1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFS::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp:143:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp:168:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp:194:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eam_fs.cpp:210:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized] if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]); ^ [ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eim.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eim.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eim.cpp [ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_gw.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_gw.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_gw.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eim.cpp: In member function 'int LAMMPS_NS::PairEIM::grabpair(FILE*, int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eim.cpp:971:35: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_eim.cpp:975:35: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ [ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_gw_zbl.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_gw_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_gw_zbl.cpp [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_nb3b_harmonic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_nb3b_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_nb3b_harmonic.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp: In member function 'void LAMMPS_NS::PairLCBOP::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:988:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:994:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&r_1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:995:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&r_2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:996:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&gamma_1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:997:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&A); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:998:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&B_1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:999:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&B_2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1000:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&alpha); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1001:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&beta_1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1002:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&beta_2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1003:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&d); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1004:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&C_1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1005:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&C_4); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1006:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&C_6); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1007:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&L); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1008:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&kappa); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1009:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&R_0); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1010:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&R_1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1011:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&r_0); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1012:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&r_1_LR); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1013:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&r_2_LR); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1014:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&v_1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1015:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&v_2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1016:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&eps_1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1017:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&eps_2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1018:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&lambda_1); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1019:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&lambda_2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1020:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&eps); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1021:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); sscanf(s,"%lg",&delta); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1024:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1033:30: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1040:40: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] while (1) { fgets(s,MAXLINE,fp); if (s[0] != '#') break; } ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1047:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_lcbop.cpp:1053:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp: In member function 'virtual void LAMMPS_NS::PairPolymorphic::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:580:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:581:60: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] while (line == strchr(line,'#')) fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:597:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:615:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:651:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp: In member function 'void LAMMPS_NS::PairPolymorphic::grab(FILE*, int, double*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:882:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_rebo.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_rebo.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_rebo.cpp [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_sw.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_sw.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_sw.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp: In member function 'virtual void LAMMPS_NS::PairPolymorphic::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:263:7: warning: 'emb' may be used uninitialized in this function [-Wmaybe-uninitialized] if (emb > epsilon) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:291:82: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally(i,i,nlocal,newton_pair,evdwl,0.0,0.0,delx,dely,delz); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:291:82: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_polymorphic.cpp:291:82: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff.cpp [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff_mod.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff_mod.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff_mod.cpp [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff_mod_c.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff_mod_c.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff_mod_c.cpp [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff_zbl.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_tersoff_zbl.cpp [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_vashishta.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_vashishta.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_vashishta.cpp [ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_vashishta_table.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_vashishta_table.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY/pair_vashishta_table.cpp [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_atom_swap.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_atom_swap.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_atom_swap.cpp [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_break.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_break.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_break.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_atom_swap.cpp: In member function 'int LAMMPS_NS::FixAtomSwap::attempt_semi_grand()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_atom_swap.cpp:391:54: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized] atom->v[i][0] *= sqrt_mass_ratio[itype][jtype]; ^ [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_create.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_create.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_create.cpp [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp: In member function 'virtual void LAMMPS_NS::FixBondSwap::post_integrate()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:629:44: warning: 'jlast' may be used uninitialized in this function [-Wmaybe-uninitialized] for (jangle = 0; jangle < num_angle[jlast]; jangle++) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:607:44: warning: 'jprev' may be used uninitialized in this function [-Wmaybe-uninitialized] for (jangle = 0; jangle < num_angle[jprev]; jangle++) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:202:25: warning: 'jnext' may be used uninitialized in this function [-Wmaybe-uninitialized] int inext,iprev,ilast,jnext,jprev,jlast,ibond,iangle,jbond,jangle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:618:44: warning: 'ilast' may be used uninitialized in this function [-Wmaybe-uninitialized] for (iangle = 0; iangle < num_angle[ilast]; iangle++) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:491:39: warning: 'iprev' may be used uninitialized in this function [-Wmaybe-uninitialized] if (iprev >= 0) iprevtag = tag[iprev]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:202:7: warning: 'inext' may be used uninitialized in this function [-Wmaybe-uninitialized] int inext,iprev,ilast,jnext,jprev,jlast,ibond,iangle,jbond,jangle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:414:53: warning: 'jnextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized] angle_eng(jnextangletype,i,jnext,jlast) + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:419:49: warning: 'jangletype' may be used uninitialized in this function [-Wmaybe-uninitialized] angle_eng(jangletype,jprev,j,jnext) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:418:53: warning: 'inextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized] angle_eng(inextangletype,i,inext,ilast) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:413:56: warning: 'iangletype' may be used uninitialized in this function [-Wmaybe-uninitialized] delta += angle_eng(iangletype,iprev,i,jnext) + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_bond_swap.cpp:457:37: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized] for (jbond = 0; jbond < num_bond[j]; jbond++) ^ [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_gcmc.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_gcmc.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_gcmc.cpp [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_tfmc.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_tfmc.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_tfmc.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_tfmc.cpp: In member function 'virtual void LAMMPS_NS::FixTFMC::initial_integrate(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_tfmc.cpp:255:36: warning: 'masstotal' may be used uninitialized in this function [-Wmaybe-uninitialized] group->xcm(igroup,masstotal,cm); ^ [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp: In member function 'virtual void LAMMPS_NS::PairDSMC::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp:350:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp:354:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp:355:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp: In member function 'virtual void LAMMPS_NS::PairDSMC::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp:383:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp:384:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&max_cell_size,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp:385:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&seed,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp:386:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/pair_dsmc.cpp:387:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_gcmc.cpp: In member function 'double LAMMPS_NS::FixGCMC::energy_full()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MC/fix_gcmc.cpp:2296:11: warning: 'imolecule' may be used uninitialized in this function [-Wmaybe-uninitialized] if (imolecule == molecule[j]) continue; ^ [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/compute_msd_nongauss.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/compute_msd_nongauss.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/compute_msd_nongauss.cpp [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/compute_ti.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/compute_ti.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/compute_ti.cpp [ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_deposit.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_deposit.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_deposit.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp: In function 'int sizeofint(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:559:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] while (size >= num && num_of_bits < 32) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp: In function 'int sizeofints(int, unsigned int*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:600:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] while (bytes[num_of_bytes] >= num) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp: In function 'void sendints(int*, int, int, unsigned int*, unsigned int*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:654:37: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if (num_of_bits >= num_of_bytes * 8) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:655:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (i = 0; i < num_of_bytes; i++) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:660:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (i = 0; i < num_of_bytes-1; i++) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp: In function 'int receivebits(int*, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:695:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if (lastbits < num_of_bits) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp: In function 'int xdr3dfcoord(XDR*, float*, int*, float*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:397:54: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] #define LASTIDX (sizeof(magicints) / sizeof(int) - 1 ) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:935:23: note: in expansion of macro 'LASTIDX' while (smallidx < LASTIDX && magicints[smallidx] < mindiff) { ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:46:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] #define MYMIN(a,b) ((a) < (b) ? (a) : (b)) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:939:14: note: in expansion of macro 'MYMIN' maxidx = MYMIN(LASTIDX, smallidx + 8) ; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:46:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] #define MYMIN(a,b) ((a) < (b) ? (a) : (b)) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:1115:14: note: in expansion of macro 'MYMIN' maxidx = MYMIN(LASTIDX, smallidx + 8) ; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:1141:54: warning: 'bitsizeint[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] thiscoord[2] = receivebits(buf, bitsizeint[2]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:1140:54: warning: 'bitsizeint[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] thiscoord[1] = receivebits(buf, bitsizeint[1]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/dump_xtc.cpp:1139:54: warning: 'bitsizeint[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] thiscoord[0] = receivebits(buf, bitsizeint[0]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_deposit.cpp: In member function 'virtual void LAMMPS_NS::FixDeposit::pre_exchange()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_deposit.cpp:529:56: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] else atom->avec->create_atom(ntype+onemols[imol]->type[m],coords[m]); ^ [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_efield.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_efield.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_efield.cpp [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_evaporate.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_evaporate.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_evaporate.cpp [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_gld.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_gld.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_gld.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_evaporate.cpp: In member function 'virtual void LAMMPS_NS::FixEvaporate::pre_exchange()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_evaporate.cpp:324:31: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] } else if (me == proc && i == iatom) { ^ [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_oneway.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_oneway.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_oneway.cpp [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_orient_bcc.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_orient_bcc.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_orient_bcc.cpp [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_orient_fcc.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_orient_fcc.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_orient_fcc.cpp [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_thermal_conductivity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_thermal_conductivity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_thermal_conductivity.cpp [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_ttm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_ttm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_ttm.cpp [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_viscosity.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_viscosity.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/fix_viscosity.cpp [ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp: In member function 'virtual double LAMMPS_NS::PairNMCut::init_one(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:277:12: warning: unused variable 'rr1' [-Wunused-variable] double rr1 = mm[i][j]*(nn[i][j]-1)*pow(r0[i][j],nn[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:278:12: warning: unused variable 'rr2' [-Wunused-variable] double rr2 = nn[i][j]*(mm[i][j]-1)*pow(r0[i][j],mm[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:279:12: warning: unused variable 'p1' [-Wunused-variable] double p1 = 1-nn[i][j]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:280:12: warning: unused variable 'p2' [-Wunused-variable] double p2 = 1-mm[i][j]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:282:12: warning: unused variable 'rrr1' [-Wunused-variable] double rrr1 = pow(r0[i][j],nn[i][j])*(1-nn[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:283:12: warning: unused variable 'rrr2' [-Wunused-variable] double rrr2 = pow(r0[i][j],mm[i][j])*(1-mm[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:331:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:335:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&e0[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:336:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:337:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&nn[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:338:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mm[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:339:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:369:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:370:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:371:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut.cpp:372:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulCut::init_one(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:327:12: warning: unused variable 'rr1' [-Wunused-variable] double rr1 = mm[i][j]*(nn[i][j]-1)*pow(r0[i][j],nn[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:328:12: warning: unused variable 'rr2' [-Wunused-variable] double rr2 = nn[i][j]*(mm[i][j]-1)*pow(r0[i][j],mm[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:329:12: warning: unused variable 'p1' [-Wunused-variable] double p1 = 1-nn[i][j]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:330:12: warning: unused variable 'p2' [-Wunused-variable] double p2 = 1-mm[i][j]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:332:12: warning: unused variable 'rrr1' [-Wunused-variable] double rrr1 = pow(r0[i][j],nn[i][j])*(1-nn[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:333:12: warning: unused variable 'rrr2' [-Wunused-variable] double rrr2 = pow(r0[i][j],mm[i][j])*(1-mm[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:382:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:386:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&e0[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:387:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:388:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&nn[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:389:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mm[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:390:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:391:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:423:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:424:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:425:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:426:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:427:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulCut::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:487:65: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:151:58: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized] r0n[itype][jtype]*rninv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_cut.cpp:153:58: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized] r0m[itype][jtype]*rminv) - ^ [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/xdr_compat.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/xdr_compat.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/xdr_compat.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulLong::init_one(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:374:12: warning: unused variable 'rr1' [-Wunused-variable] double rr1 = mm[i][j]*(nn[i][j]-1)*pow(r0[i][j],nn[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:375:12: warning: unused variable 'rr2' [-Wunused-variable] double rr2 = nn[i][j]*(mm[i][j]-1)*pow(r0[i][j],mm[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:376:12: warning: unused variable 'p1' [-Wunused-variable] double p1 = 1-nn[i][j]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:377:12: warning: unused variable 'p2' [-Wunused-variable] double p2 = 1-mm[i][j]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:379:12: warning: unused variable 'rrr1' [-Wunused-variable] double rrr1 = pow(r0[i][j],nn[i][j])*(1-nn[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:380:12: warning: unused variable 'rrr2' [-Wunused-variable] double rrr2 = pow(r0[i][j],mm[i][j])*(1-mm[i][j]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:429:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:433:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&e0[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:434:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:435:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&nn[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:436:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mm[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:437:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:470:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:471:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:472:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:473:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:474:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:475:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:476:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulLong::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:562:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:562:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:565:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:560:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] phicoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:572:65: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:187:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:192:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:197:50: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized] (mm[itype][jtype]*r0n[itype][jtype]*rninv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:198:50: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized] nn[itype][jtype]*r0m[itype][jtype]*rminv) - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:189:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC/pair_nm_cut_coul_long.cpp:189:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_charmm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_charmm.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_charmm.cpp: In member function 'virtual void LAMMPS_NS::AngleCharmm::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_charmm.cpp:249:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_charmm.cpp:250:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&theta0[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_charmm.cpp:251:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k_ub[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_charmm.cpp:252:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r_ub[1],sizeof(double),atom->nangletypes,fp); ^ [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine.cpp [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_delta.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_delta.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_delta.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine.cpp: In member function 'virtual void LAMMPS_NS::AngleCosine::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine.cpp:197:70: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (comm->me == 0) fread(&k[1],sizeof(double),atom->nangletypes,fp); ^ [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_periodic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_periodic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_periodic.cpp [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_squared.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_squared.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_squared.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_periodic.cpp: In member function 'virtual void LAMMPS_NS::AngleCosinePeriodic::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_periodic.cpp:250:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_periodic.cpp:251:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&b[1],sizeof(int),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_periodic.cpp:252:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&multiplicity[1],sizeof(int),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_squared.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineSquared::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_squared.cpp:219:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_cosine_squared.cpp:220:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&theta0[1],sizeof(double),atom->nangletypes,fp); ^ [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_harmonic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_harmonic.cpp [ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_harmonic.cpp: In member function 'virtual void LAMMPS_NS::AngleHarmonic::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_harmonic.cpp:219:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_harmonic.cpp:220:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&theta0[1],sizeof(double),atom->nangletypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp: In member function 'virtual void LAMMPS_NS::AngleTable::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp:292:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabstyle,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp:293:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tablength,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp: In member function 'void LAMMPS_NS::AngleTable::read_table(LAMMPS_NS::AngleTable::Table*, char*, char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp:385:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); // no match, skip section ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp:387:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp:388:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp:394:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp:403:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/angle_table.cpp:405:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_angle.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_angle.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_angle.cpp [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_bond.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_bond.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_bond.cpp [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_full.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_full.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_full.cpp [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_molecular.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_molecular.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_molecular.cpp [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_template.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_template.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/atom_vec_template.cpp [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene.cpp: In member function 'virtual void LAMMPS_NS::BondFENE::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene.cpp:220:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene.cpp:221:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene.cpp:222:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene.cpp:223:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[1],sizeof(double),atom->nbondtypes,fp); ^ [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene_expand.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene_expand.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene_expand.cpp: In member function 'virtual void LAMMPS_NS::BondFENEExpand::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene_expand.cpp:229:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene_expand.cpp:230:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene_expand.cpp:231:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene_expand.cpp:232:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_fene_expand.cpp:233:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&shift[1],sizeof(double),atom->nbondtypes,fp); ^ [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_gromos.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_gromos.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_gromos.cpp [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_harmonic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_harmonic.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_gromos.cpp: In member function 'virtual void LAMMPS_NS::BondGromos::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_gromos.cpp:172:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_gromos.cpp:173:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_harmonic.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonic::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_harmonic.cpp:172:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_harmonic.cpp:173:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[1],sizeof(double),atom->nbondtypes,fp); ^ [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_morse.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_morse.cpp [ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_nonlinear.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_nonlinear.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_nonlinear.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_morse.cpp: In member function 'virtual void LAMMPS_NS::BondMorse::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_morse.cpp:176:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&d0[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_morse.cpp:177:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_morse.cpp:178:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_nonlinear.cpp: In member function 'virtual void LAMMPS_NS::BondNonlinear::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_nonlinear.cpp:171:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_nonlinear.cpp:172:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_nonlinear.cpp:173:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&lamda[1],sizeof(double),atom->nbondtypes,fp); ^ [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_quartic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_quartic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_quartic.cpp [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_quartic.cpp: In member function 'virtual void LAMMPS_NS::BondQuartic::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_quartic.cpp:281:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_quartic.cpp:282:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&b1[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_quartic.cpp:283:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&b2[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_quartic.cpp:284:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&rc[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_quartic.cpp:285:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&u0[1],sizeof(double),atom->nbondtypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp: In member function 'virtual void LAMMPS_NS::BondTable::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp:236:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tabstyle,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp:237:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tablength,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp: In member function 'void LAMMPS_NS::BondTable::read_table(LAMMPS_NS::BondTable::Table*, char*, char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp:314:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); // no match, skip section ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp:316:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp:317:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp:323:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/bond_table.cpp:335:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmm.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmm.cpp: In member function 'virtual void LAMMPS_NS::DihedralCharmm::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmm.cpp:429:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmm.cpp:430:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmm.cpp:431:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&shift[1],sizeof(int),atom->ndihedraltypes,fp); ^ [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmmfsw.cpp.o /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmm.cpp:432:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&weight[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmm.cpp:433:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&weightflag,sizeof(int),1,fp); ^ /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmmfsw.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmmfsw.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmmfsw.cpp: In member function 'virtual void LAMMPS_NS::DihedralCharmmfsw::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmmfsw.cpp:472:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmmfsw.cpp:473:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmmfsw.cpp:474:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&shift[1],sizeof(int),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmmfsw.cpp:475:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&weight[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_charmmfsw.cpp:476:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&weightflag,sizeof(int),1,fp); ^ [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_harmonic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_harmonic.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_harmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralHarmonic::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_harmonic.cpp:333:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_harmonic.cpp:334:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sign[1],sizeof(int),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_harmonic.cpp:335:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp); ^ [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_helix.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_helix.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_helix.cpp [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_multi_harmonic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_multi_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_multi_harmonic.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_helix.cpp: In member function 'virtual void LAMMPS_NS::DihedralHelix::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_helix.cpp:325:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&aphi[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_helix.cpp:326:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bphi[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_helix.cpp:327:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cphi[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_multi_harmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralMultiHarmonic::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_multi_harmonic.cpp:320:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_multi_harmonic.cpp:321:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_multi_harmonic.cpp:322:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a3[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_multi_harmonic.cpp:323:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a4[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_multi_harmonic.cpp:324:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&a5[1],sizeof(double),atom->ndihedraltypes,fp); ^ [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_opls.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_opls.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_opls.cpp [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/fix_cmap.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/fix_cmap.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/fix_cmap.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_opls.cpp: In member function 'virtual void LAMMPS_NS::DihedralOPLS::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_opls.cpp:335:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k1[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_opls.cpp:336:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k2[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_opls.cpp:337:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k3[1],sizeof(double),atom->ndihedraltypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/dihedral_opls.cpp:338:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k4[1],sizeof(double),atom->ndihedraltypes,fp); ^ [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp: In member function 'virtual void LAMMPS_NS::ImproperCvff::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp:339:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp:340:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sign[1],sizeof(int),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp:341:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&multiplicity[1],sizeof(int),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp: In member function 'virtual void LAMMPS_NS::ImproperCvff::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp:209:15: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized] pd = -pd; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_cvff.cpp:208:18: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized] p = 2.0 - p; ^ [ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_harmonic.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_harmonic.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/fix_cmap.cpp: In member function 'double LAMMPS_NS::FixCMAP::dihedral_angle_atan2(double, double, double, double, double, double, double, double, double, double)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/fix_cmap.cpp:958:10: warning: 'angle' may be used uninitialized in this function [-Wmaybe-uninitialized] return angle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_harmonic.cpp: In member function 'virtual void LAMMPS_NS::ImproperHarmonic::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_harmonic.cpp:280:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_harmonic.cpp:281:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&chi[1],sizeof(double),atom->nimpropertypes,fp); ^ [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_umbrella.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_umbrella.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_umbrella.cpp [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_umbrella.cpp: In member function 'virtual void LAMMPS_NS::ImproperUmbrella::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_umbrella.cpp:321:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&kw[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_umbrella.cpp:322:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&w0[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/improper_umbrella.cpp:323:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&C[1],sizeof(double),atom->nimpropertypes,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingLJ::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp:153:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] else k = atom->map(klist[kk]+tagprev); ^ [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual double LAMMPS_NS::PairHbondDreidingLJ::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp:512:41: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] else k = atom->map(klist[kk]+tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingLJ::coeff(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp:375:9: warning: 'donor_flag' may be used uninitialized in this function [-Wmaybe-uninitialized] if (donor_flag == 0) type2param[i][j][k] = nparams; ^ [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingMorse::coeff(int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp:302:9: warning: 'donor_flag' may be used uninitialized in this function [-Wmaybe-uninitialized] if (donor_flag == 0) type2param[i][j][k] = nparams; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingMorse::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp:123:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] else k = atom->map(klist[kk]+tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual double LAMMPS_NS::PairHbondDreidingMorse::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp:415:41: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] else k = atom->map(klist[kk]+tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:379:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:383:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:384:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:385:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&eps14[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:386:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma14[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:440:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_inner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:441:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:442:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul_inner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:443:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:444:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:445:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulCharmm::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:502:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:168:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:201:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:134:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:134:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:437:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:441:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:442:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:443:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&eps14[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:444:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma14[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:474:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_inner,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:475:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:476:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:477:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:478:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:621:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:625:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:626:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:627:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:663:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeO,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::single(int, int, int, int, double, double, double, double&)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:534:34: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] philj6 = -lj4[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:529:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:664:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeH,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:665:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeB,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:666:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeA,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:667:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&qdist,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:669:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:670:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:671:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:672:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:673:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:196:42: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl6 = -lj4[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:194:47: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl12 = r6inv*lj3[itype][jtype]*r6inv - ^ [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:378:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:377:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:305:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:301:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fH[0]; ^ [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/atom_vec_peri.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/atom_vec_peri.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/atom_vec_peri.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:480:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::read_restart_settings(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:507:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeO,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:508:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeH,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:509:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeB,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:510:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&typeA,sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:511:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&qdist,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:513:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::compute(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:338:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:337:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:265:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fH[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE/pair_tip4p_cut.cpp:261:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fH[0]; ^ [ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_damage_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_damage_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_damage_atom.cpp [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_dilatation_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_dilatation_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_dilatation_atom.cpp [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_plasticity_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_plasticity_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_plasticity_atom.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_dilatation_atom.cpp: In member function 'virtual void LAMMPS_NS::ComputeDilatationAtom::compute_peratom()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/compute_dilatation_atom.cpp:116:52: warning: 'theta' may be used uninitialized in this function [-Wmaybe-uninitialized] if (mask[i] & groupbit) dilatation[i] = theta[i]; ^ [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/fix_peri_neigh.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/fix_peri_neigh.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/fix_peri_neigh.cpp [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp: In member function 'virtual void LAMMPS_NS::PairPeriEPS::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp:570:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp:574:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bulkmodulus[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp:575:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&shearmodulus[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp:576:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&s00[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp:577:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp:578:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_eps.cpp:579:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&m_yieldstress[i][j],sizeof(double),1,fp); ^ [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_pmb.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_pmb.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_pmb.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp: In member function 'virtual void LAMMPS_NS::PairPeriLPS::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp:495:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp:499:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bulkmodulus[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp:500:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&shearmodulus[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp:501:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&s00[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp:502:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_lps.cpp:503:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_pmb.cpp: In member function 'virtual void LAMMPS_NS::PairPeriPMB::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_pmb.cpp:424:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_pmb.cpp:428:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&kspring[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_pmb.cpp:429:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&s00[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_pmb.cpp:430:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_pmb.cpp:431:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/compute_event_displace.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/compute_event_displace.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/compute_event_displace.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp: In member function 'virtual void LAMMPS_NS::PairPeriVES::read_restart(FILE*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp:552:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp:556:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&bulkmodulus[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp:557:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&shearmodulus[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp:558:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&s00[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp:559:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&alpha[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp:560:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp:561:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&m_lambdai[i][j],sizeof(double),1,fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI/pair_peri_ves.cpp:562:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&m_taubi[i][j],sizeof(double),1,fp); ^ [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_event.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_event.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_event.cpp [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_event_prd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_event_prd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_event_prd.cpp [ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_event_tad.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_event_tad.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_event_tad.cpp [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_neb.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_neb.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_neb.cpp [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/neb.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/neb.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/neb.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_neb.cpp: In member function 'virtual void LAMMPS_NS::FixNEB::min_post_force(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_neb.cpp:616:45: warning: 'lenuntilIm' may be used uninitialized in this function [-Wmaybe-uninitialized] prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_neb.cpp:616:45: warning: 'idealPos' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/fix_neb.cpp:616:58: warning: 'meanDist' may be used uninitialized in this function [-Wmaybe-uninitialized] prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist); ^ [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/prd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/prd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/prd.cpp [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/tad.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/tad.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/tad.cpp [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/temper.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/temper.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/temper.cpp [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/verlet_split.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/verlet_split.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA/verlet_split.cpp [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/compute_erotate_rigid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/compute_erotate_rigid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/compute_erotate_rigid.cpp [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/compute_ke_rigid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/compute_ke_rigid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/compute_ke_rigid.cpp [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/compute_rigid_local.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/compute_rigid_local.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/compute_rigid_local.cpp [ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_ehex.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_ehex.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_ehex.cpp [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rattle.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rattle.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rattle.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_ehex.cpp: In member function 'virtual void LAMMPS_NS::FixEHEX::init()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_ehex.cpp:203:48: warning: 'id_shake' may be used uninitialized in this function [-Wmaybe-uninitialized] fshake = ((FixShake*) modify->fix[id_shake]); ^ [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::compute_forces_and_torques()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1033:10: warning: unused variable 'dtfm' [-Wunused-variable] double dtfm; ^ [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh.cpp: In member function 'virtual void LAMMPS_NS::FixRigidNH::final_integrate()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh.cpp:594:7: warning: unused variable 'i' [-Wunused-variable] int i,ibody; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh.cpp:596:15: warning: unused variable 'xy' [-Wunused-variable] double dtfm,xy,xz,yz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh.cpp:596:18: warning: unused variable 'xz' [-Wunused-variable] double dtfm,xy,xz,yz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh.cpp:596:21: warning: unused variable 'yz' [-Wunused-variable] double dtfm,xy,xz,yz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp: In constructor 'LAMMPS_NS::FixRigid::FixRigid(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:580:51: warning: 'seed' may be used uninitialized in this function [-Wmaybe-uninitialized] if (langflag) random = new RanMars(lmp,seed + me); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:397:30: warning: 'zflag' may be used uninitialized in this function [-Wmaybe-uninitialized] tflag[m-1][2] = zflag; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:396:30: warning: 'yflag' may be used uninitialized in this function [-Wmaybe-uninitialized] tflag[m-1][1] = yflag; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:395:30: warning: 'xflag' may be used uninitialized in this function [-Wmaybe-uninitialized] tflag[m-1][0] = xflag; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:359:34: warning: 'zflag' may be used uninitialized in this function [-Wmaybe-uninitialized] if (domain->dimension == 2 && zflag == 1.0) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:365:30: warning: 'yflag' may be used uninitialized in this function [-Wmaybe-uninitialized] fflag[m-1][1] = yflag; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:364:30: warning: 'xflag' may be used uninitialized in this function [-Wmaybe-uninitialized] fflag[m-1][0] = xflag; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:225:32: warning: 'molecule' may be used uninitialized in this function [-Wmaybe-uninitialized] if (custom_flag) delete [] molecule; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::set_xv()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1484:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1479:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1463:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1407:50: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized] x[i][1] += xcm[ibody][1] - ybox*yprd - zbox*yz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1406:60: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized] x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1406:50: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized] x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::set_v()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1629:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1616:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1578:40: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized] x1 = x[i][1] + ybox*yprd + zbox*yz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1577:50: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized] x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:1577:40: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized] x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz; ^ [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh_small.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh_small.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh_small.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::setup_bodies_dynamic()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:2225:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] radone = lbonus[line[i]].length; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::readfile(int, double*, double**, double**, double**, LAMMPS_NS::imageint*, int*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:2298:67: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized] eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh_small.cpp: In member function 'virtual void LAMMPS_NS::FixRigidNHSmall::final_integrate()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nh_small.cpp:621:7: warning: unused variable 'i' [-Wunused-variable] int i,ibody; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::setup_bodies_static()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:2124:31: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized] if (infile && inbody[ibody]) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:2105:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:2022:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] orient[i][0] = lbonus[line[i]].theta - theta_body; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid.cpp:2087:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nph.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nph.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nph.cpp [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nph_small.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nph_small.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nph_small.cpp [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_npt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_npt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_npt.cpp [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_npt_small.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_npt_small.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_npt_small.cpp [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nve.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nve.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nve.cpp [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nve_small.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nve_small.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nve_small.cpp [ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nvt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nvt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nvt.cpp [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nvt_small.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nvt_small.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_nvt_small.cpp [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_shake.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_shake.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_shake.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp: In member function 'virtual void LAMMPS_NS::FixRigidSmall::write_restart_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:2702:26: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized] if (me == 0) fclose(fp); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::set_xv()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:1364:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:1359:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:1344:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::set_v()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:1502:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:1489:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::setup_bodies_dynamic()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:2422:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] radone = lbonus[line[i]].length; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp: In constructor 'LAMMPS_NS::FixRigidSmall::FixRigidSmall(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:496:57: warning: 'seed' may be used uninitialized in this function [-Wmaybe-uninitialized] if (langflag) random = new RanMars(lmp,seed + comm->me); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::readfile(int, double**, int*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:2508:67: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized] eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer); ^ [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_append_atoms.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_append_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_append_atoms.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::setup_bodies_static()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:2306:31: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized] if (infile && inbody[ibody]) continue; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:2284:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:2199:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] orient[i][0] = lbonus[line[i]].theta - theta_body; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID/fix_rigid_small.cpp:2266:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_msst.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_msst.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_msst.cpp [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_nphug.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_nphug.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_nphug.cpp [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_wall_piston.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_wall_piston.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK/fix_wall_piston.cpp [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/compute_sna_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/compute_sna_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/compute_sna_atom.cpp [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/compute_snad_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/compute_snad_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/compute_snad_atom.cpp [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/compute_snav_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/compute_snav_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/compute_snav_atom.cpp [ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/pair_snap.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/pair_snap.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/pair_snap.cpp [ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/sna.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/sna.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/sna.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/pair_snap.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/pair_snap.cpp:478:9: warning: 'ielem' may be used uninitialized in this function [-Wmaybe-uninitialized] int ielem; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/pair_snap.cpp:725:53: warning: 'starttime' may be used uninitialized in this function [-Wmaybe-uninitialized] if (time_guided) schedule_time_guided = endtime - starttime; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP/pair_snap.cpp:523:12: note: 'starttime' was declared here double starttime, endtime; ^ [ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp [ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_wall_srd.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_wall_srd.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_wall_srd.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_wall_srd.cpp: In constructor 'LAMMPS_NS::FixWallSRD::FixWallSRD(LAMMPS_NS::LAMMPS*, int, char**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_wall_srd.cpp:67:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized] wallwhich[nwall] = newwall; ^ [ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_invoke.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_invoke.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_invoke.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::big_static()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:2966:25: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] c1 = tbonus[tri[i]].c1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:2954:30: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] length = lbonus[line[i]].length; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:2938:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::big_dynamic()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:3049:30: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertia = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:3036:40: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] biglist[k].theta = lbonus[line[i]].theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:3024:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::end_of_step()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_invoke.cpp:91:14: warning: unused variable 'result' [-Wunused-variable] PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::post_force(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_invoke.cpp:108:14: warning: unused variable 'result' [-Wunused-variable] PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::reset_velocities()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1017:33: warning: 'dof_tstat' may be used uninitialized in this function [-Wmaybe-uninitialized] tbin = vbin[i].value[0]/(n-dof_tstat) * tfactor; ^ [ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::parameterize()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:2683:37: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] double *c1 = tbonus[tri[i]].c1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:2703:41: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] double length = lbonus[line[i]].length; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:2700:46: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] double *shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::init()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp:146:14: warning: unused variable 'result' [-Wunused-variable] PyObject * result = PyEval_CallObject(py_init, NULL); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate(int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp:164:14: warning: unused variable 'result' [-Wunused-variable] PyObject * result = PyEval_CallObject(py_initial_integrate, arglist); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp:182:14: warning: unused variable 'result' [-Wunused-variable] PyObject * result = PyEval_CallObject(py_final_integrate, NULL); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate_respa(int, int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp:200:14: warning: unused variable 'result' [-Wunused-variable] PyObject * result = PyEval_CallObject(py_initial_integrate_respa, arglist); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate_respa(int, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp:219:14: warning: unused variable 'result' [-Wunused-variable] PyObject * result = PyEval_CallObject(py_final_integrate_respa, arglist); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::reset_dt()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/fix_python_move.cpp:237:14: warning: unused variable 'result' [-Wunused-variable] PyObject * result = PyEval_CallObject(py_reset_dt, NULL); ^ [ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/pair_python.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/pair_python.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/pair_python.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::collisions_multi()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1548:33: warning: 'xbcollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] xbcoll[2] = xbcollfirst[2]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1547:33: warning: 'xbcollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] xbcoll[1] = xbcollfirst[1]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1546:33: warning: 'xbcollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] xbcoll[0] = xbcollfirst[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1545:33: warning: 'xscollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] xscoll[2] = xscollfirst[2]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1544:33: warning: 'xscollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] xscoll[1] = xscollfirst[1]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1543:33: warning: 'xscollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] xscoll[0] = xscollfirst[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1551:29: warning: 'normfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] norm[2] = normfirst[2]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1550:29: warning: 'normfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] norm[1] = normfirst[1]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1549:29: warning: 'normfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] norm[0] = normfirst[0]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1576:32: warning: 'typefirst' may be used uninitialized in this function [-Wmaybe-uninitialized] if (collidestyle == SLIP && type == SPHERE) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD/fix_srd.cpp:1581:33: warning: 'jfirst' may be used uninitialized in this function [-Wmaybe-uninitialized] force_wall(v[i],vsnew,j); ^ [ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/python_impl.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/python_impl.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/python_impl.cpp [ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI/compute_voronoi_atom.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI/compute_voronoi_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI/compute_voronoi_atom.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/python_impl.cpp: In member function 'int LAMMPS_NS::PythonImpl::create_entry(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/python_impl.cpp:410:47: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] else if (format && strlen(format) != ninput+noutput) ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/python_impl.cpp: In member function 'virtual void LAMMPS_NS::PythonImpl::invoke_function(int, char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON/python_impl.cpp:320:36: warning: 'pValue' may be used uninitialized in this function [-Wmaybe-uninitialized] PyTuple_SetItem(pArgs,i,pValue); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI/compute_voronoi_atom.cpp: In member function 'void LAMMPS_NS::ComputeVoronoi::processCell(voro::voronoicell_neighbor&, int)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI/compute_voronoi_atom.cpp:515:30: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (j=0; j = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:497:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:492:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:476:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:497:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:492:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:476:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ [ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nvt_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nvt_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nvt_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:497:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:492:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:476:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:497:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:492:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:476:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:674:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:661:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ [ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:674:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:661:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:674:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_omp.cpp:661:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ [ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_nphug_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_nphug_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_nphug_omp.cpp [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_class2_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_class2_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:438:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:433:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:418:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:438:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:433:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:418:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:438:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:433:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:418:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:438:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:433:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:418:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:612:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:599:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:612:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:599:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:612:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_small_omp.cpp:599:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp:239:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized] pd = -pd; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp:238:7: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized] p = 2.0 - p; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp:239:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized] pd = -pd; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp:238:7: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized] p = 2.0 - p; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_BOND = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp:239:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized] pd = -pd; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_BOND = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp:239:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_BOND = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp:239:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_BOND = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_cvff_omp.cpp:239:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_harmonic_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_harmonic_omp.cpp [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_umbrella_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_umbrella_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/improper_umbrella_omp.cpp [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/respa_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/respa_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/respa_omp.cpp [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/ewald_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/ewald_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/ewald_omp.cpp [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/msm_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/msm_omp.cpp [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/msm_cg_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/msm_cg_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/msm_cg_omp.cpp [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_omp.cpp [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_cg_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_cg_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_cg_omp.cpp [ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_disp_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_disp_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_disp_omp.cpp [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_disp_tip4p_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_disp_tip4p_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_disp_tip4p_omp.cpp [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_tip4p_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_tip4p_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pppm_tip4p_omp.cpp [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_atomonly_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_atomonly_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_atomonly_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp:113:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp:49:43: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp:114:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp:50:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp:113:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_omp.cpp:49:38: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp:119:67: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp:51:43: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp:120:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp:52:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp:119:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_bin_ghost_omp.cpp:51:38: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp:121:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp:50:46: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp:122:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp:51:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp:121:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_multi_omp.cpp:50:41: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom; ^ [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp:113:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp:51:36: note: 'iatom' was declared here int i,j,n,itype,jtype,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp:114:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp:52:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp:113:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_omp.cpp:51:31: note: 'imol' was declared here int i,j,n,itype,jtype,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:113:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:51:36: note: 'iatom' was declared here int i,j,n,itype,jtype,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:114:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:52:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:113:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:51:31: note: 'imol' was declared here int i,j,n,itype,jtype,which,imol,iatom; ^ [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp [ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:117:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:50:43: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:118:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:51:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:117:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:50:38: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:126:67: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:54:43: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:127:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:55:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:126:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:54:38: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp:150:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp:50:43: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp:120:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp:51:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp:150:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_omp.cpp:50:38: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:123:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:49:43: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:124:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:50:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:123:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:49:38: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:124:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:51:46: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:125:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:52:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:124:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:51:41: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom; ^ [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp:157:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp:50:46: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp:121:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp:51:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp:157:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_omp.cpp:50:41: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:133:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:51:46: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:134:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:52:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:133:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:51:41: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom; ^ [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:113:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:52:36: note: 'iatom' was declared here int i,j,n,itype,jtype,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:114:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:53:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:113:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:52:31: note: 'imol' was declared here int i,j,n,itype,jtype,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:121:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:55:36: note: 'iatom' was declared here int i,j,n,itype,jtype,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:122:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:56:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:121:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:55:31: note: 'imol' was declared here int i,j,n,itype,jtype,which,imol,iatom; ^ [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp:131:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp:51:46: note: 'iatom' was declared here int i,j,n,itype,jtype,itag,jtag,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp:132:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp:52:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp:131:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_nsq_newton_omp.cpp:51:41: note: 'imol' was declared here int i,j,n,itype,jtype,itag,jtag,which,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:148:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:54: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:149:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:56:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:148:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:49: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:166:55: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] if (which == 0) neighptr_middle[n_middle++] = j; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:40: note: 'n_middle' was declared here int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:191:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:58:34: note: 'neighptr_middle' was declared here int *neighptr,*neighptr_inner,*neighptr_middle; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:17: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] index += n; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:95:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:192:36: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] numneigh_middle[i] = n_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:82:22: note: 'numneigh_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:191:45: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:82:40: note: 'firstneigh_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:190:26: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] ilist_middle[i] = i; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:82:8: note: 'ilist_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ [ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:194:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:54: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:151:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:55:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:194:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:49: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:167:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] if (which == 0) neighptr_middle[n_middle++] = j; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:40: note: 'n_middle' was declared here int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:237:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:57:34: note: 'neighptr_middle' was declared here int *neighptr,*neighptr_inner,*neighptr_middle; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:17: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] index += n; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:94:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:238:36: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] numneigh_middle[i] = n_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:81:22: note: 'numneigh_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:237:45: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:81:40: note: 'firstneigh_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:236:26: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] ilist_middle[i] = i; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:81:8: note: 'ilist_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:155:65: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:54: note: 'iatom' was declared here int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:156:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:55:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:155:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:49: note: 'imol' was declared here int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:173:55: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] if (which == 0) neighptr_middle[n_middle++] = j; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:40: note: 'n_middle' was declared here int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:198:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:57:34: note: 'neighptr_middle' was declared here int *neighptr,*neighptr_inner,*neighptr_middle; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:17: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] errorflag = 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:94:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:145:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:47: note: 'iatom' was declared here int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:146:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:57:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:145:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:42: note: 'imol' was declared here int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:161:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] if (which == 0) neighptr_middle[n_middle++] = j; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:33: note: 'n_middle' was declared here int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:185:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:59:34: note: 'neighptr_middle' was declared here int *neighptr,*neighptr_inner,*neighptr_middle; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:17: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] index += n; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:98:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:186:36: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] numneigh_middle[i] = n_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:85:22: note: 'numneigh_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:185:45: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:85:40: note: 'firstneigh_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:184:26: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] ilist_middle[i] = i; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:85:8: note: 'ilist_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp: In function '': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:163:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:57: note: 'iatom' was declared here int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:164:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] tag[j]-tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:58:10: note: 'tagprev' was declared here tagint tagprev; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:163:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized] onemols[imol]->nspecial[iatom], ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:52: note: 'imol' was declared here int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:180:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] if (which == 0) neighptr_middle[n_middle++] = j; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:43: note: 'n_middle' was declared here int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:204:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:60:34: note: 'neighptr_middle' was declared here int *neighptr,*neighptr_inner,*neighptr_middle; ^ In file included from /builddir/build/BUILD/lammps-stable_22Aug2018/src/neigh_list.h:18:0, from /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:17: /builddir/build/BUILD/lammps-stable_22Aug2018/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] index += n; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:99:16: note: 'ipage_middle' was declared here MyPage *ipage_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:205:36: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] numneigh_middle[i] = n_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:86:22: note: 'numneigh_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:204:45: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] firstneigh_middle[i] = neighptr_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:86:40: note: 'firstneigh_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:203:26: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized] ilist_middle[i] = i; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:86:8: note: 'ilist_middle' was declared here int *ilist_middle,*numneigh_middle,**firstneigh_middle; ^ [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_bin_newton_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_bin_newton_omp.cpp [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_nsq_newtoff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_nsq_newtoff_omp.cpp [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_nsq_newton_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_half_size_nsq_newton_omp.cpp [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_halffull_newtoff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_halffull_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_halffull_newtoff_omp.cpp [ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_halffull_newton_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_halffull_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/npair_halffull_newton_omp.cpp [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_beck_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_beck_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_beck_omp.cpp [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_omp.cpp [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp:182:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp:179:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp:182:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp:182:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp:179:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_wolf_omp.cpp:182:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv + ^ [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_cut_omp.cpp [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_cut_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_cut_omp.cpp:157:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_cut_omp.cpp:157:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_cut_omp.cpp:157:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_cut_omp.cpp:157:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_debye_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_debye_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_debye_omp.cpp [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_dsf_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_dsf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_dsf_omp.cpp [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_wolf_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_wolf_omp.cpp [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_dpd_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_dpd_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_dpd_omp.cpp [ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_dpd_tstat_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_dpd_tstat_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_dpd_tstat_omp.cpp [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gauss_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gauss_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gauss_omp.cpp [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj96_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj96_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj96_cut_omp.cpp [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cubic_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cubic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cubic_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cubic_omp.cpp: In member function 'void LAMMPS_NS::PairLJCubicOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cubic_omp.cpp:149:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = epsilon[itype][jtype]* ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cubic_omp.cpp:147:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cubic_omp.cpp: In member function 'void LAMMPS_NS::PairLJCubicOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cubic_omp.cpp:149:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = epsilon[itype][jtype]* ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cubic_omp.cpp:147:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]); ^ [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_omp.cpp [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:159:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:156:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = factor_coul * qqrd2e * qtmp*q[j]*rinv; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:159:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:156:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = factor_coul * qqrd2e * qtmp*q[j]*rinv; ^ [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:159:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:159:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:162:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:159:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:159:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:162:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:182:13: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:183:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:176:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:182:13: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:182:13: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:183:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:176:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:182:13: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_expand_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_expand_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_expand_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:182:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:182:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_omp.cpp [ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_omp.cpp:148:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_omp.cpp:148:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsCoulGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp:182:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsCoulGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp:182:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_linear_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_linear_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_linear_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp: In member function 'void LAMMPS_NS::PairLJSmoothOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp:152:13: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp:152:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp:149:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp: In member function 'void LAMMPS_NS::PairLJSmoothOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp:152:13: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp:152:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_smooth_omp.cpp:149:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - ^ [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_morse_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_morse_omp.cpp [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_soft_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_soft_omp.cpp [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_ufm_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_ufm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_ufm_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp: In member function 'void LAMMPS_NS::PairTableOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp:189:13: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a * tb->e[itable] + b * tb->e[itable+1] + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp:189:13: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp:187:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = tb->e[itable] + fraction*tb->de[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp: In member function 'void LAMMPS_NS::PairTableOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp:189:13: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a * tb->e[itable] + b * tb->e[itable+1] + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp:189:13: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_table_omp.cpp:187:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = tb->e[itable] + fraction*tb->de[itable]; ^ [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_yukawa_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_yukawa_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_yukawa_omp.cpp [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_zbl_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_zbl_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_zbl_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_zbl_omp.cpp: In member function 'void LAMMPS_NS::PairZBLOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_zbl_omp.cpp:148:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] eswitch = t*t*t * ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_zbl_omp.cpp: In member function 'void LAMMPS_NS::PairZBLOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_zbl_omp.cpp:148:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gayberne_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gayberne_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gayberne_omp.cpp [ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_resquared_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_resquared_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_resquared_omp.cpp [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_omp.cpp [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:161:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:161:13: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:161:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:161:13: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:172:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:173:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:177:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:177:13: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:172:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:173:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:177:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:177:13: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_brownian_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_brownian_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_brownian_omp.cpp [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_brownian_poly_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_brownian_poly_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_brownian_poly_omp.cpp [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lubricate_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lubricate_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lubricate_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp:213:19: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG) ev_tally_thr(this, i,j,nlocal,NEWTON_PAIR, ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp:206:7: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] fztmp += delz*fpair; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp:213:19: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG) ev_tally_thr(this, i,j,nlocal,NEWTON_PAIR, ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp:206:7: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] fztmp += delz*fpair; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp:206:7: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_colloid_omp.cpp:206:7: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lubricate_poly_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lubricate_poly_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lubricate_poly_omp.cpp [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_yukawa_colloid_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_yukawa_colloid_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_yukawa_colloid_omp.cpp [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:256:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += qtmp*r3inv*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += -q[j]*r3inv*pidotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:15: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:15: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:256:15: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += qtmp*r3inv*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:261:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ [ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gran_hertz_history_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gran_hertz_history_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gran_hertz_history_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:256:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += qtmp*r3inv*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += -q[j]*r3inv*pidotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:15: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:15: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:256:15: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += qtmp*r3inv*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:261:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gran_hooke_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gran_hooke_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gran_hooke_omp.cpp [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gran_hooke_history_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gran_hooke_history_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_gran_hooke_history_omp.cpp [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp:171:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp:172:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp:175:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp:171:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp:172:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp:175:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_long_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp:167:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp:166:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp:170:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp:170:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp:167:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp:166:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp:170:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_born_coul_msm_omp.cpp:170:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp:171:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp:172:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp:175:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp:171:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp:172:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp:175:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_long_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_long_coul_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_long_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_long_coul_long_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp:167:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp:166:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp:170:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp:170:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp:167:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp:166:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp:170:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_buck_coul_msm_omp.cpp:170:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp:176:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp:181:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp:178:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp:178:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp:176:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp:181:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp:178:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_long_omp.cpp:178:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp:176:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp:171:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp:173:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp:173:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp:176:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp:171:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp:173:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_coul_msm_omp.cpp:173:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:193:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:197:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:190:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:190:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:193:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:197:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:190:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:190:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:188:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:192:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:185:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:185:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:188:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:192:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:185:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:185:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:456:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:464:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:462:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:467:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:464:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:470:23: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:464:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:462:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:467:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:464:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:456:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:470:23: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 0; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 1; int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:456:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 1; int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:470:23: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 1; int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:456:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 1; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:470:23: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 0; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_coul_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_coul_long_omp.cpp [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_inner(int, int, LAMMPS_NS::ThrData*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1337:28: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1333:28: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1306:28: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1302:28: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_middle(int, int, LAMMPS_NS::ThrData*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1599:28: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1595:28: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1568:28: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1564:28: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1080:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1080:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 0; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:416:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:412:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 1; int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:441:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:439:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:444:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:441:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 1; int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:441:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:439:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:444:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:441:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 1; int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 1; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:433:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 0; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:416:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:412:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:357:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_long_omp.cpp:353:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_adp_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_adp_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_adp_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1080:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1080:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp: In member function 'void LAMMPS_NS::PairAIREBOOMP::TORSION_thr(int, int, int, int, double*, LAMMPS_NS::ThrData*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:1001:77: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] ev_tally4_thr(this,i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl,thr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp: In member function 'void LAMMPS_NS::PairAIREBOOMP::FLJ_thr(int, int, int, int, int, double*, LAMMPS_NS::ThrData*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:571:21: warning: 'dwij' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair = dC*dwij / rij; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:615:32: warning: 'dwmjS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair3 = dC*wikS*wkmS*dwmjS / rmjS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:610:33: warning: 'wmjS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair2 = dC*wikS*dwkmS*wmjS / rkmS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:610:27: warning: 'dwkmS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair2 = dC*wikS*dwkmS*wmjS / rkmS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:615:27: warning: 'wkmS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair3 = dC*wikS*wkmS*dwmjS / rmjS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:586:27: warning: 'dwkjS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair2 = dC*wikS*dwkjS / rkjS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:582:28: warning: 'wkjS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair1 = dC*dwikS*wkjS / rikS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:605:22: warning: 'dwikS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair1 = dC*dwikS*wkmS*wmjS / rikS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:610:22: warning: 'wikS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair2 = dC*wikS*dwkmS*wmjS / rkmS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:615:45: warning: 'rmjS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair3 = dC*wikS*wkmS*dwmjS / rmjS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:610:45: warning: 'rkmS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair2 = dC*wikS*dwkmS*wmjS / rkmS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:586:40: warning: 'rkjS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair2 = dC*wikS*dwkjS / rkjS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:605:45: warning: 'rikS' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair1 = dC*dwikS*wkmS*wmjS / rikS; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:641:84: warning: 'atomm' may be used uninitialized in this function [-Wmaybe-uninitialized] v_tally4_thr(atomi,atomj,atomk,atomm,fi,fj,fk,delimS,deljmS,delkmS,thr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_omp.cpp:641:84: warning: 'atomk' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_morse_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_airebo_morse_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ [ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_comb_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_comb_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_comb_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1080:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1080:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloyOMP::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp:139:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp:167:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp:187:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_alloy_omp.cpp:200:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized] if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1080:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFSOMP::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp:139:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp:167:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp:189:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1080:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eam_fs_omp.cpp:205:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized] if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]); ^ [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eim_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eim_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_eim_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1032:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nb3b_harmonic_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nb3b_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nb3b_harmonic_omp.cpp [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_rebo_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_rebo_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_rebo_omp.cpp [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_sw_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_sw_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_sw_omp.cpp [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_omp.cpp [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_mod_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_mod_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_mod_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_mod_c_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_mod_c_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_mod_c_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ [ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_zbl_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_zbl_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tersoff_zbl_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_vashishta_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_vashishta_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_vashishta_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_vashishta_table_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_vashishta_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_vashishta_table_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nm_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nm_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nm_cut_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] else k = atom->map(klist[kk]+tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] else k = atom->map(klist[kk]+tagprev); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:195:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulCharmmOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp:182:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulCharmmOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp:182:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp [ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:422:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:346:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:342:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:422:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:346:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:342:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:422:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:346:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:342:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:422:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:346:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:342:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:405:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:401:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:346:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:342:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:393:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:317:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:313:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:393:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:317:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:313:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:393:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:317:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:313:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 1; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:393:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:317:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:313:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int = 0; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:376:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:372:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:317:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_tip4p_cut_omp.cpp:313:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_peri_lps_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_peri_lps_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_peri_lps_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_peri_pmb_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_peri_pmb_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_peri_pmb_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_nh_asphere_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_nh_asphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_nh_asphere_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1981:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized] if (EVFLAG && vflag) key += 2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = iH2; ^ [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1].x += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:779:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:774:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:758:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:779:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:774:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:758:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:779:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:774:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:758:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:779:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:774:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] lbonus[line[i]].theta = theta; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:758:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:956:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:943:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:956:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:943:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:956:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized] inertiaatom = tbonus[tri[i]].inertia; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP/fix_rigid_nh_omp.cpp:943:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized] shape = ebonus[ellipsoid[i]].shape; ^ [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_opt.cpp [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_morse_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_morse_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_morse_opt.cpp [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_ufm_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_ufm_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_ufm_opt.cpp [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp:207:17: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp:207:17: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp:209:17: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp:209:40: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp:207:17: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp:207:17: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp:209:17: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_charmm_coul_long_opt.cpp:209:40: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp [ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:176:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:181:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:185:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:176:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:181:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:185:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:176:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:181:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:185:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:178:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:178:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:176:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:181:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:185:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:178:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_coul_long_opt.cpp:178:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 1; int = 1; int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 1; int = 1; int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_long_coul_long_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_long_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_long_coul_long_opt.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 1; int = 1; int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 1; int = 1; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 1; int = 0; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:410:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:406:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 0; int = 1; int = 1; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:435:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:433:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:438:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:435:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 0; int = 1; int = 1; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:435:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:433:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:438:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:435:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 0; int = 1; int = 0; int = 1]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 0; int = 1; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:427:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH2; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] vlist[n++] = jH1; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int = 0; int = 0; int = 0; int = 0]': /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:410:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:406:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[jH1][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:351:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH2][0] += fHx; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:347:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized] f[iH1][0] += fHx; ^ [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_eam_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_eam_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_eam_opt.cpp [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_eam_alloy_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_eam_alloy_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_eam_alloy_opt.cpp [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_eam_fs_opt.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_eam_fs_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT/pair_eam_fs_opt.cpp [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/fix_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/fix_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/fix_gpu.cpp [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pppm_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pppm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pppm_gpu.cpp [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_beck_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_beck_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_beck_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_beck_gpu.cpp: In member function 'void LAMMPS_NS::PairBeckGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_beck_gpu.cpp:240:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_gpu.cpp: In member function 'void LAMMPS_NS::PairBornGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_gpu.cpp:242:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_gpu.cpp:282:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_gpu.cpp:279:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_gpu.cpp:279:72: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_gpu.cpp:283:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] d[itype][jtype]*r6inv*r2inv - offset[itype][jtype]; ^ [ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_gpu.cpp:238:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_cut_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_cut_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_cut_gpu.cpp:250:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_cut_gpu.cpp:250:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_cut_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_cut_gpu.cpp [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_debye_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_debye_gpu.cpp [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_dsf_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_dsf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_dsf_gpu.cpp [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_dpd_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_dpd_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_dpd_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_dpd_gpu.cpp: In member function 'void LAMMPS_NS::PairDPDGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_dpd_gpu.cpp:406:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_dpd_tstat_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_dpd_tstat_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_dpd_tstat_gpu.cpp [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gauss_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gauss_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gauss_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gauss_gpu.cpp: In member function 'void LAMMPS_NS::PairGaussGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gauss_gpu.cpp:231:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj96_cut_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj96_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj96_cut_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj96_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJ96CutGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj96_cut_gpu.cpp:226:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cubic_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cubic_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cubic_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cubic_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCubicGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cubic_gpu.cpp:234:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] (PHIS + DPHIDS*t - A3*t*t*t/6.0); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cubic_gpu.cpp:231:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cubic_gpu.cpp:238:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_gpu.cpp:237:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp:249:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:253:72: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:253:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:256:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:283:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:284:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:270:28: warning: 'forcecoul' may be used uninitialized in this function [-Wmaybe-uninitialized] fpair = (forcecoul + factor_lj*forcelj) * r2inv; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:277:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:283:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift); ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_expand_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_expand_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_expand_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_expand_gpu.cpp: In member function 'void LAMMPS_NS::PairLJExpandGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_expand_gpu.cpp:239:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_gromacs_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_gromacs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_gromacs_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_gromacs_gpu.cpp: In member function 'void LAMMPS_NS::PairLJGromacsGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_gromacs_gpu.cpp:236:71: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_gromacs_gpu.cpp:242:74: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_mie_cut_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_mie_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_mie_cut_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_mie_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairMIECutGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_mie_cut_gpu.cpp:226:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_morse_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_morse_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_morse_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_morse_gpu.cpp: In member function 'void LAMMPS_NS::PairMorseGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_morse_gpu.cpp:222:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_soft_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_soft_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_soft_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_soft_gpu.cpp: In member function 'void LAMMPS_NS::PairSoftGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_soft_gpu.cpp:233:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_table_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_table_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_table_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_table_gpu.cpp: In member function 'void LAMMPS_NS::PairTableGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_table_gpu.cpp:334:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized] ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_table_gpu.cpp:334:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized] ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_table_gpu.cpp:331:45: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = tb->e[itable] + fraction*tb->de[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_table_gpu.cpp:339:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_ufm_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_ufm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_ufm_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_ufm_gpu.cpp: In member function 'void LAMMPS_NS::PairUFMGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_ufm_gpu.cpp:236:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_gpu.cpp [ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_zbl_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_zbl_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_zbl_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_gpu.cpp: In member function 'void LAMMPS_NS::PairYukawaGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_gpu.cpp:225:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gayberne_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gayberne_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gayberne_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_zbl_gpu.cpp: In member function 'void LAMMPS_NS::PairZBLGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_zbl_gpu.cpp:233:59: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized] (sw3[itype][jtype] + sw4[itype][jtype]*t); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_zbl_gpu.cpp:238:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_resquared_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_resquared_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_resquared_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_resquared_gpu.cpp: In member function 'void LAMMPS_NS::PairRESquaredGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_resquared_gpu.cpp:310:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized] if (eflag) evdwl = factor_lj*one_eng; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_resquared_gpu.cpp:313:73: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] fforce[2],-r12[0],-r12[1],-r12[2]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gayberne_gpu.cpp: In member function 'void LAMMPS_NS::PairGayBerneGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gayberne_gpu.cpp:335:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized] if (eflag) evdwl = factor_lj*one_eng; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_gayberne_gpu.cpp:338:63: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] -r12[0],-r12[1],-r12[2]); ^ [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_gpu.cpp [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_gpu.cpp: In member function 'void LAMMPS_NS::PairLJClass2GPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_gpu.cpp:223:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_colloid_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_colloid_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp:273:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp:274:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp:277:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp:277:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) - ^ [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_colloid_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_colloid_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_colloid_gpu.cpp: In member function 'void LAMMPS_NS::PairColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_colloid_gpu.cpp:302:22: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized] f[i][2] += delz*fpair; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_colloid_gpu.cpp:298:36: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (eflag) evdwl *= factor_lj; ^ [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_colloid_gpu.cpp: In member function 'void LAMMPS_NS::PairYukawaColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_yukawa_colloid_gpu.cpp:236:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz); ^ [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:355:34: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += qtmp*r3inv*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:353:35: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += -q[j]*r3inv*pidotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:351:29: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:351:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:355:28: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += qtmp*r3inv*pjdotr; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:360:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:219:34: warning: variable 'tjxcoul' set but not used [-Wunused-but-set-variable] double tixcoul,tiycoul,tizcoul,tjxcoul,tjycoul,tjzcoul; ^ [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:419:70: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:419:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:419:54: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:416:47: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:416:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:416:31: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:419:70: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:419:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:419:54: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:424:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ [ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_long_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_long_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_gpu.cpp:283:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_gpu.cpp:284:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_gpu.cpp:288:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_gpu.cpp:287:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_long_gpu.cpp:275:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_long_gpu.cpp:276:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_long_gpu.cpp:280:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_buck_coul_long_gpu.cpp:280:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv - ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongGPU::init_style()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp:151:16: warning: unused variable 'cut' [-Wunused-variable] double cut = init_one(i,j); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp:282:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp:287:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp:284:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_gpu.cpp:284:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongGPU::init_style()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:154:10: warning: variable 'cut' set but not used [-Wunused-but-set-variable] double cut; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:319:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:324:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:328:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:321:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:321:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:328:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]); ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:306:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:311:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:315:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:308:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:308:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:283:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:278:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*egamma; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:287:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) - ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:280:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:70: warning: 'ecoul' may be used uninitialized in this function [-Wmaybe-uninitialized] if (evflag) ev_tally_full(i,evdwl,ecoul,fpair,delx,dely,delz); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:70: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:280:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloyGPU::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp:377:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp:378:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp:379:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp:380:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp:405:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp:425:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFSGPU::read_file(char*)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp:377:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp:378:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp:379:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp:380:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp:405:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp:427:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fptr); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_alloy_gpu.cpp:432:55: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized] if (me == 0) grab(fptr,file->nr,&file->rhor[i][1]); ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_sw_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_sw_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_sw_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_eam_fs_gpu.cpp:443:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized] if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]); ^ [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_tersoff_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_tersoff_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_tersoff_gpu.cpp [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_tersoff_mod_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_tersoff_mod_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_tersoff_mod_gpu.cpp [ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_tersoff_zbl_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_tersoff_zbl_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_tersoff_zbl_gpu.cpp [100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_vashishta_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_vashishta_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_vashishta_gpu.cpp [100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_cs_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_cs_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_vashishta_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairVashishtaGPU::init_style()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_vashishta_gpu.cpp:154:24: warning: unused variable 'r0eps' [-Wunused-variable] double *cutsq, *r0, *r0eps, *gamma, *eta; ^ [100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_cs_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_cs_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:285:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv + ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:282:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:282:72: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:286:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] d[itype][jtype]*r6inv*r2inv - offset[itype][jtype]; ^ [100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_cs_gpu.cpp:326:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_cs_gpu.cpp:327:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_cs_gpu.cpp:331:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized] + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_born_coul_long_cs_gpu.cpp:330:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized] evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongCSGPU::init_style()': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp:156:16: warning: unused variable 'cut' [-Wunused-variable] double cut = init_one(i,j); ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairCoulLongCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)': /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp:307:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized] ecoul = prefactor*erfc; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp:312:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized] if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp:309:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ /builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU/pair_coul_long_cs_gpu.cpp:309:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized] table = etable[itable] + fraction*detable[itable]; ^ [100%] Linking CXX shared library liblammps.so /usr/bin/cmake3 -E cmake_link_script CMakeFiles/lammps.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -Wl,-z,relro -shared -Wl,-soname,liblammps.so.0 -o liblammps.so.0 @CMakeFiles/lammps.dir/objects1.rsp libmpi_stubs.a -lfftw3 -lpython3.4m -ljpeg -lpng -lz -lvoro++ -lm libatc.a libgpu.a -lopenblas -lOpenCL /usr/bin/cmake3 -E cmake_symlink_library liblammps.so.0 liblammps.so.0 liblammps.so make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' [100%] Built target lammps /usr/bin/make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' cd /builddir/build/BUILD/lammps-stable_22Aug2018/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/serial /builddir/build/BUILD/lammps-stable_22Aug2018/serial /builddir/build/BUILD/lammps-stable_22Aug2018/serial/CMakeFiles/lmp.dir/DependInfo.cmake --color= Scanning dependencies of target lmp make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' /usr/bin/make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' [100%] Building CXX object CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/main.cpp.o /usr/bin/c++ -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/BODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/COLLOID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/KSPACE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MISC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PERI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/REPLICA -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/RIGID -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SHOCK -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SNAP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/SRD -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/PYTHON -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/VORONOI -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/QEQ -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/OPT -I/builddir/build/BUILD/lammps-stable_22Aug2018/src/GPU -I/builddir/build/BUILD/lammps-stable_22Aug2018/src -I/builddir/build/BUILD/lammps-stable_22Aug2018/serial/styles -I/builddir/build/BUILD/lammps-stable_22Aug2018/lib/atc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIE -o CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/main.cpp.o -c /builddir/build/BUILD/lammps-stable_22Aug2018/src/main.cpp [100%] Linking CXX executable lmp /usr/bin/cmake3 -E cmake_link_script CMakeFiles/lmp.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -Wl,-z,relro -rdynamic CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-stable_22Aug2018/src/main.cpp.o -o lmp -Wl,-rpath,/builddir/build/BUILD/lammps-stable_22Aug2018/serial: liblammps.so.0 libmpi_stubs.a -lfftw3 -lpython3.4m -ljpeg -lpng -lz -lvoro++ -lm libatc.a -lopenblas libgpu.a -lOpenCL make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' [100%] Built target lmp make[1]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' /usr/bin/cmake3 -E cmake_progress_start /builddir/build/BUILD/lammps-stable_22Aug2018/serial/CMakeFiles 0 + cd .. + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.k2Z5Wr + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64 ++ dirname /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64 + cd lammps-stable_22Aug2018 + /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64 -C serial make: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' /usr/bin/cmake3 -H/builddir/build/BUILD/lammps-stable_22Aug2018/cmake -B/builddir/build/BUILD/lammps-stable_22Aug2018/serial --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake3 -E cmake_progress_start /builddir/build/BUILD/lammps-stable_22Aug2018/serial/CMakeFiles /builddir/build/BUILD/lammps-stable_22Aug2018/serial/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[1]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' /usr/bin/make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' cd /builddir/build/BUILD/lammps-stable_22Aug2018/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/serial /builddir/build/BUILD/lammps-stable_22Aug2018/serial /builddir/build/BUILD/lammps-stable_22Aug2018/serial/CMakeFiles/atc.dir/DependInfo.cmake --color= make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' /usr/bin/make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' make[2]: Nothing to be done for `CMakeFiles/atc.dir/build'. make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' [ 7%] Built target atc /usr/bin/make -f CMakeFiles/mpi_stubs.dir/build.make CMakeFiles/mpi_stubs.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' cd /builddir/build/BUILD/lammps-stable_22Aug2018/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/serial /builddir/build/BUILD/lammps-stable_22Aug2018/serial /builddir/build/BUILD/lammps-stable_22Aug2018/serial/CMakeFiles/mpi_stubs.dir/DependInfo.cmake --color= make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' /usr/bin/make -f CMakeFiles/mpi_stubs.dir/build.make CMakeFiles/mpi_stubs.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' make[2]: Nothing to be done for `CMakeFiles/mpi_stubs.dir/build'. make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' [ 7%] Built target mpi_stubs /usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' cd /builddir/build/BUILD/lammps-stable_22Aug2018/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/serial /builddir/build/BUILD/lammps-stable_22Aug2018/serial /builddir/build/BUILD/lammps-stable_22Aug2018/serial/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake --color= make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' /usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' make[2]: Nothing to be done for `CMakeFiles/ocl_get_devices.dir/build'. make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' [ 8%] Built target ocl_get_devices /usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' cd /builddir/build/BUILD/lammps-stable_22Aug2018/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/serial /builddir/build/BUILD/lammps-stable_22Aug2018/serial /builddir/build/BUILD/lammps-stable_22Aug2018/serial/CMakeFiles/gpu.dir/DependInfo.cmake --color= make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' /usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' make[2]: Nothing to be done for `CMakeFiles/gpu.dir/build'. make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' [ 20%] Built target gpu /usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' cd /builddir/build/BUILD/lammps-stable_22Aug2018/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/serial /builddir/build/BUILD/lammps-stable_22Aug2018/serial /builddir/build/BUILD/lammps-stable_22Aug2018/serial/CMakeFiles/lammps.dir/DependInfo.cmake --color= make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' /usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' make[2]: Nothing to be done for `CMakeFiles/lammps.dir/build'. make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' [100%] Built target lammps /usr/bin/make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' cd /builddir/build/BUILD/lammps-stable_22Aug2018/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/serial /builddir/build/BUILD/lammps-stable_22Aug2018/serial /builddir/build/BUILD/lammps-stable_22Aug2018/serial/CMakeFiles/lmp.dir/DependInfo.cmake --color= make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' /usr/bin/make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' make[2]: Nothing to be done for `CMakeFiles/lmp.dir/build'. make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' [100%] Built target lmp make[1]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' /usr/bin/cmake3 -E cmake_progress_start /builddir/build/BUILD/lammps-stable_22Aug2018/serial/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[1]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' make[1]: Nothing to be done for `preinstall'. make[1]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' Install the project... /usr/bin/cmake3 -P cmake_install.cmake -- Install configuration: "" -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/lib/python3.4/site-packages/lammps.py -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/lib64/liblammps.so.0 -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/lib64/liblammps.so -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/include/lammps/library.h -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/lib64/pkgconfig/liblammps.pc -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/bin/lmp -- Set runtime path of "/builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/bin/lmp" to "" -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/library.meam -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/lib.comb3 -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.smtbq.TiO2 -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.smtbq.Al2O3 -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.smtbq.Al -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.rdx -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.mattsson -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.lg -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.cho -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.budzien -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.ZnOH -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.V_O_C_H -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.Fe_O_C_H -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.FC -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.AuO -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.AB -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.eim -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.comb3 -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.comb -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.ci-reax.CH -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ci-reaxFF_ZBL.dat -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/charmm36.cmap -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/charmm22.cmap -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Zr_mm.eam.fs -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/W_zhou.eam.alloy -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/W_He_JW2013.table -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/W_2940_2017_2_He_JW2013.snap -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/W_2940_2017_2.snapparam -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/W_2940_2017_2.snapcoeff -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/W_2940_2017_2.snap -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/WL.meam -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/VFe_mm.eam.fs -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/V6.1.mgpt.potin -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/V6.1.mgpt.parmin -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/V6.1.mgpt.README -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/TiO.meam.spline -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ti.meam.sw.spline -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ti.meam.spline -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ta6.8x.mgpt.potin -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ta6.8x.mgpt.parmin -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ta6.8x.mgpt.README -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ta4.mgpt.potin -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ta4.mgpt.parmin -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ta4.mgpt.README -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ta06A.snapparam -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ta06A.snapcoeff -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ta06A.snap -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Si_2.meam.spline -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Si_1.meam.spline -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiO.tersoff -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiO.1997.vashishta -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiO.1994.vashishta -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiO.1990.vashishta -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC_Erhart-Albe.tersoff -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC_1994.tersoff -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC_1990.tersoff -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC_1989.tersoff -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiCGe.tersoff -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC.vashishta -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC.tersoff.zbl -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC.tersoff -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC.meam -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC.gw.zbl -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC.gw -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC.edip -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Si.tersoff.modc -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Si.tersoff.mod -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Si.tersoff -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Si.sw -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Si.edip -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Si.b.meam.sw.spline -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/README.reax -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/README -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Pt_u3.eam -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Pd_u3.eam -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ni_u3.eam -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ni_smf7.eam -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/NiAlH_jea.eam.fs -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/NiAlH_jea.eam.alloy -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ni.meam -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ni.adp -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Mo_Chen_PRM2017.snapparam -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Mo_Chen_PRM2017.snapcoeff -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Mo_Chen_PRM2017.snap -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Mo5.2.mgpt.potin -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Mo5.2.mgpt.parmin -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Mo5.2.mgpt.README -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Mg_mm.eam.fs -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/MOH.nb3b.harmonic -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/InP.vashishta -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/He_He_JW2013.table -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ge.tersoff -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/GaN_tersoff.poly -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/GaN_sw.poly -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/GaN.tersoff -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/GaN.sw -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/GaAs.bop.table -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Fe_mm.eam.fs -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/FeP_mm.eam.fs -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/FeCr.cdeam -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Cu_zhou.eam.alloy -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Cu_u6.eam -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Cu_u3.eam -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Cu_smf7.eam -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Cu_mishin1.eam.alloy -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CuZr_mm.eam.fs -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CuTa_eam.poly -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CuTa.eam.alloy -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CuNi.eam.alloy -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CuH.bop.table -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Cu.meam -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CoAl.eam.alloy -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CdZnTe_v2.bop.table -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CdZnTe_v1.bop.table -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CdTeZnSeHgS0.sw -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CdTeSe.bop.table -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CdTe.sw -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CdTe.bop.table -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CH.airebo-m -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CH.airebo -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CH.KC -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CCu_v2.bop.table -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CC.KC-full -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CC.KC -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/C.lcbop -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/BNCH.ILP -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/BNCH-old.ILP -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/BNC.tersoff -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/BN.extep -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Au_u3.eam -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Al_zhou.eam.alloy -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Al_prb.agni -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Al_mm.eam.fs -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Al_jpc.agni -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Al_jnp.eam -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/AlSiMgCuFe.meam -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/AlO.streitz -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/AlO.eam.alloy -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/AlFe_mm.eam.fs -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/AlCu.eam.alloy -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/AlCu.bop.table -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/AlCu.adp -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ag_u3.eam -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/etc/profile.d/lammps.sh -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/etc/profile.d/lammps.csh make: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' + /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64 -C mpich make: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' /usr/bin/cmake3 -H/builddir/build/BUILD/lammps-stable_22Aug2018/cmake -B/builddir/build/BUILD/lammps-stable_22Aug2018/mpich --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake3 -E cmake_progress_start /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/CMakeFiles /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[1]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' /usr/bin/make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' cd /builddir/build/BUILD/lammps-stable_22Aug2018/mpich && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/mpich /builddir/build/BUILD/lammps-stable_22Aug2018/mpich /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/CMakeFiles/atc.dir/DependInfo.cmake --color= make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' /usr/bin/make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' make[2]: Nothing to be done for `CMakeFiles/atc.dir/build'. make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' [ 7%] Built target atc /usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' cd /builddir/build/BUILD/lammps-stable_22Aug2018/mpich && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/mpich /builddir/build/BUILD/lammps-stable_22Aug2018/mpich /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake --color= make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' /usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' make[2]: Nothing to be done for `CMakeFiles/ocl_get_devices.dir/build'. make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' [ 8%] Built target ocl_get_devices /usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' cd /builddir/build/BUILD/lammps-stable_22Aug2018/mpich && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/mpich /builddir/build/BUILD/lammps-stable_22Aug2018/mpich /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/CMakeFiles/gpu.dir/DependInfo.cmake --color= make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' /usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' make[2]: Nothing to be done for `CMakeFiles/gpu.dir/build'. make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' [ 19%] Built target gpu /usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' cd /builddir/build/BUILD/lammps-stable_22Aug2018/mpich && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/mpich /builddir/build/BUILD/lammps-stable_22Aug2018/mpich /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/CMakeFiles/lammps.dir/DependInfo.cmake --color= make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' /usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' make[2]: Nothing to be done for `CMakeFiles/lammps.dir/build'. make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' [100%] Built target lammps /usr/bin/make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' cd /builddir/build/BUILD/lammps-stable_22Aug2018/mpich && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/mpich /builddir/build/BUILD/lammps-stable_22Aug2018/mpich /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/CMakeFiles/lmp.dir/DependInfo.cmake --color= make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' /usr/bin/make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' make[2]: Nothing to be done for `CMakeFiles/lmp.dir/build'. make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' [100%] Built target lmp make[1]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' /usr/bin/cmake3 -E cmake_progress_start /builddir/build/BUILD/lammps-stable_22Aug2018/mpich/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[1]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' make[1]: Nothing to be done for `preinstall'. make[1]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' Install the project... /usr/bin/cmake3 -P cmake_install.cmake -- Install configuration: "" -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/lib/python3.4/site-packages/lammps.py -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/lib64/mpich/lib/liblammps.so.0 -- Set runtime path of "/builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/lib64/mpich/lib/liblammps.so.0" to "" -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/lib64/mpich/lib/liblammps.so -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/include/lammps/library.h -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/lib64/mpich/lib/pkgconfig/liblammps.pc -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/lib64/mpich/bin/lmp -- Set runtime path of "/builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/lib64/mpich/bin/lmp" to "" -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/library.meam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/lib.comb3 -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.smtbq.TiO2 -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.smtbq.Al2O3 -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.smtbq.Al -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.rdx -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.mattsson -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.lg -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.cho -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.budzien -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.ZnOH -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.V_O_C_H -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.Fe_O_C_H -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.FC -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.AuO -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.AB -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.eim -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.comb3 -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.comb -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.ci-reax.CH -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ci-reaxFF_ZBL.dat -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/charmm36.cmap -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/charmm22.cmap -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Zr_mm.eam.fs -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/W_zhou.eam.alloy -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/W_He_JW2013.table -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/W_2940_2017_2_He_JW2013.snap -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/W_2940_2017_2.snapparam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/W_2940_2017_2.snapcoeff -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/W_2940_2017_2.snap -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/WL.meam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/VFe_mm.eam.fs -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/V6.1.mgpt.potin -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/V6.1.mgpt.parmin -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/V6.1.mgpt.README -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/TiO.meam.spline -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ti.meam.sw.spline -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ti.meam.spline -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ta6.8x.mgpt.potin -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ta6.8x.mgpt.parmin -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ta6.8x.mgpt.README -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ta4.mgpt.potin -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ta4.mgpt.parmin -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ta4.mgpt.README -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ta06A.snapparam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ta06A.snapcoeff -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ta06A.snap -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Si_2.meam.spline -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Si_1.meam.spline -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiO.tersoff -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiO.1997.vashishta -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiO.1994.vashishta -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiO.1990.vashishta -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC_Erhart-Albe.tersoff -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC_1994.tersoff -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC_1990.tersoff -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC_1989.tersoff -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiCGe.tersoff -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC.vashishta -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC.tersoff.zbl -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC.tersoff -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC.meam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC.gw.zbl -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC.gw -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC.edip -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Si.tersoff.modc -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Si.tersoff.mod -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Si.tersoff -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Si.sw -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Si.edip -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Si.b.meam.sw.spline -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/README.reax -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/README -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Pt_u3.eam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Pd_u3.eam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ni_u3.eam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ni_smf7.eam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/NiAlH_jea.eam.fs -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/NiAlH_jea.eam.alloy -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ni.meam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ni.adp -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Mo_Chen_PRM2017.snapparam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Mo_Chen_PRM2017.snapcoeff -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Mo_Chen_PRM2017.snap -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Mo5.2.mgpt.potin -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Mo5.2.mgpt.parmin -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Mo5.2.mgpt.README -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Mg_mm.eam.fs -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/MOH.nb3b.harmonic -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/InP.vashishta -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/He_He_JW2013.table -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ge.tersoff -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/GaN_tersoff.poly -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/GaN_sw.poly -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/GaN.tersoff -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/GaN.sw -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/GaAs.bop.table -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Fe_mm.eam.fs -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/FeP_mm.eam.fs -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/FeCr.cdeam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Cu_zhou.eam.alloy -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Cu_u6.eam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Cu_u3.eam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Cu_smf7.eam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Cu_mishin1.eam.alloy -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CuZr_mm.eam.fs -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CuTa_eam.poly -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CuTa.eam.alloy -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CuNi.eam.alloy -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CuH.bop.table -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Cu.meam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CoAl.eam.alloy -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CdZnTe_v2.bop.table -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CdZnTe_v1.bop.table -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CdTeZnSeHgS0.sw -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CdTeSe.bop.table -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CdTe.sw -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CdTe.bop.table -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CH.airebo-m -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CH.airebo -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CH.KC -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CCu_v2.bop.table -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CC.KC-full -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CC.KC -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/C.lcbop -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/BNCH.ILP -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/BNCH-old.ILP -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/BNC.tersoff -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/BN.extep -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Au_u3.eam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Al_zhou.eam.alloy -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Al_prb.agni -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Al_mm.eam.fs -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Al_jpc.agni -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Al_jnp.eam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/AlSiMgCuFe.meam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/AlO.streitz -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/AlO.eam.alloy -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/AlFe_mm.eam.fs -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/AlCu.eam.alloy -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/AlCu.bop.table -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/AlCu.adp -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ag_u3.eam -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/etc/profile.d/lammps.sh -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/etc/profile.d/lammps.csh make: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' + /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64 -C openmpi make: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' /usr/bin/cmake3 -H/builddir/build/BUILD/lammps-stable_22Aug2018/cmake -B/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake3 -E cmake_progress_start /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/CMakeFiles /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[1]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' /usr/bin/make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' cd /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/CMakeFiles/atc.dir/DependInfo.cmake --color= make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' /usr/bin/make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' make[2]: Nothing to be done for `CMakeFiles/atc.dir/build'. make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' [ 7%] Built target atc /usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' cd /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake --color= make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' /usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' make[2]: Nothing to be done for `CMakeFiles/ocl_get_devices.dir/build'. make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' [ 8%] Built target ocl_get_devices /usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' cd /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/CMakeFiles/gpu.dir/DependInfo.cmake --color= make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' /usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' make[2]: Nothing to be done for `CMakeFiles/gpu.dir/build'. make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' [ 19%] Built target gpu /usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' cd /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/CMakeFiles/lammps.dir/DependInfo.cmake --color= make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' /usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' make[2]: Nothing to be done for `CMakeFiles/lammps.dir/build'. make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' [100%] Built target lammps /usr/bin/make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/depend make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' cd /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/cmake /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/CMakeFiles/lmp.dir/DependInfo.cmake --color= make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' /usr/bin/make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/build make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' make[2]: Nothing to be done for `CMakeFiles/lmp.dir/build'. make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' [100%] Built target lmp make[1]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' /usr/bin/cmake3 -E cmake_progress_start /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[1]: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' make[1]: Nothing to be done for `preinstall'. make[1]: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' Install the project... /usr/bin/cmake3 -P cmake_install.cmake -- Install configuration: "" -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/lib/python3.4/site-packages/lammps.py -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/lib64/openmpi/lib/liblammps.so.0 -- Set runtime path of "/builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/lib64/openmpi/lib/liblammps.so.0" to "" -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/lib64/openmpi/lib/liblammps.so -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/include/lammps/library.h -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/lib64/openmpi/lib/pkgconfig/liblammps.pc -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/lib64/openmpi/bin/lmp -- Set runtime path of "/builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/lib64/openmpi/bin/lmp" to "" -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/library.meam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/lib.comb3 -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.smtbq.TiO2 -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.smtbq.Al2O3 -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.smtbq.Al -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.rdx -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.mattsson -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.lg -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.cho -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.budzien -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.ZnOH -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.V_O_C_H -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.Fe_O_C_H -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.FC -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.AuO -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.reax.AB -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.eim -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.comb3 -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.comb -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ffield.ci-reax.CH -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/ci-reaxFF_ZBL.dat -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/charmm36.cmap -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/charmm22.cmap -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Zr_mm.eam.fs -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/W_zhou.eam.alloy -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/W_He_JW2013.table -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/W_2940_2017_2_He_JW2013.snap -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/W_2940_2017_2.snapparam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/W_2940_2017_2.snapcoeff -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/W_2940_2017_2.snap -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/WL.meam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/VFe_mm.eam.fs -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/V6.1.mgpt.potin -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/V6.1.mgpt.parmin -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/V6.1.mgpt.README -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/TiO.meam.spline -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ti.meam.sw.spline -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ti.meam.spline -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ta6.8x.mgpt.potin -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ta6.8x.mgpt.parmin -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ta6.8x.mgpt.README -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ta4.mgpt.potin -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ta4.mgpt.parmin -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ta4.mgpt.README -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ta06A.snapparam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ta06A.snapcoeff -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ta06A.snap -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Si_2.meam.spline -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Si_1.meam.spline -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiO.tersoff -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiO.1997.vashishta -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiO.1994.vashishta -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiO.1990.vashishta -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC_Erhart-Albe.tersoff -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC_1994.tersoff -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC_1990.tersoff -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC_1989.tersoff -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiCGe.tersoff -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC.vashishta -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC.tersoff.zbl -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC.tersoff -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC.meam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC.gw.zbl -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC.gw -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/SiC.edip -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Si.tersoff.modc -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Si.tersoff.mod -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Si.tersoff -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Si.sw -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Si.edip -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Si.b.meam.sw.spline -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/README.reax -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/README -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Pt_u3.eam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Pd_u3.eam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ni_u3.eam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ni_smf7.eam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/NiAlH_jea.eam.fs -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/NiAlH_jea.eam.alloy -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ni.meam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ni.adp -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Mo_Chen_PRM2017.snapparam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Mo_Chen_PRM2017.snapcoeff -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Mo_Chen_PRM2017.snap -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Mo5.2.mgpt.potin -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Mo5.2.mgpt.parmin -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Mo5.2.mgpt.README -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Mg_mm.eam.fs -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/MOH.nb3b.harmonic -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/InP.vashishta -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/He_He_JW2013.table -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ge.tersoff -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/GaN_tersoff.poly -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/GaN_sw.poly -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/GaN.tersoff -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/GaN.sw -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/GaAs.bop.table -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Fe_mm.eam.fs -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/FeP_mm.eam.fs -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/FeCr.cdeam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Cu_zhou.eam.alloy -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Cu_u6.eam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Cu_u3.eam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Cu_smf7.eam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Cu_mishin1.eam.alloy -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CuZr_mm.eam.fs -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CuTa_eam.poly -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CuTa.eam.alloy -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CuNi.eam.alloy -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CuH.bop.table -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Cu.meam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CoAl.eam.alloy -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CdZnTe_v2.bop.table -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CdZnTe_v1.bop.table -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CdTeZnSeHgS0.sw -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CdTeSe.bop.table -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CdTe.sw -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CdTe.bop.table -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CH.airebo-m -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CH.airebo -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CH.KC -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CCu_v2.bop.table -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CC.KC-full -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/CC.KC -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/C.lcbop -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/BNCH.ILP -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/BNCH-old.ILP -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/BNC.tersoff -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/BN.extep -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Au_u3.eam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Al_zhou.eam.alloy -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Al_prb.agni -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Al_mm.eam.fs -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Al_jpc.agni -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Al_jnp.eam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/AlSiMgCuFe.meam -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/AlO.streitz -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/AlO.eam.alloy -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/AlFe_mm.eam.fs -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/AlCu.eam.alloy -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/AlCu.bop.table -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/AlCu.adp -- Up-to-date: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/lammps/potentials/potentials/Ag_u3.eam -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/etc/profile.d/lammps.sh -- Installing: /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/etc/profile.d/lammps.csh make: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' + /usr/lib/rpm/find-debuginfo.sh --strict-build-id -m --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 /builddir/build/BUILD/lammps-stable_22Aug2018 extracting debug info from /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/bin/lmp extracting debug info from /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/lib64/openmpi/bin/lmp extracting debug info from /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/lib64/openmpi/lib/liblammps.so.0 extracting debug info from /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/lib64/mpich/bin/lmp extracting debug info from /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/lib64/mpich/lib/liblammps.so.0 extracting debug info from /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/lib64/liblammps.so.0 /usr/lib/rpm/sepdebugcrcfix: Updated 6 CRC32s, 0 CRC32s did match. symlinked /usr/lib/debug/usr/lib64/openmpi/lib/liblammps.so.0.debug to /usr/lib/debug/usr/lib64/openmpi/lib/liblammps.so.debug symlinked /usr/lib/debug/usr/lib64/mpich/lib/liblammps.so.0.debug to /usr/lib/debug/usr/lib64/mpich/lib/liblammps.so.debug symlinked /usr/lib/debug/usr/lib64/liblammps.so.0.debug to /usr/lib/debug/usr/lib64/liblammps.so.debug 50499 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-compress + /usr/lib/rpm/redhat/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1 Bytecompiling .py files below /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/lib/python3.4 using /usr/bin/python3.4 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/lib/rpm/redhat/brp-java-repack-jars Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.EJod8R + umask 022 + cd /builddir/build/BUILD + cd lammps-stable_22Aug2018 + make -C serial -j2 test make: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' Running tests... /usr/bin/ctest3 --force-new-ctest-process Test project /builddir/build/BUILD/lammps-stable_22Aug2018/serial Start 1: ShowHelp 1/1 Test #1: ShowHelp ......................... Passed 0.12 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 0.12 sec make: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/serial' + . /etc/profile.d/modules.sh ++++ /bin/ps -p 14161 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' '' = '' ']' +++ LOADEDMODULES= +++ export LOADEDMODULES +++ '[' /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core = '' ']' + module load mpi/mpich-x86_64 ++ /usr/bin/modulecmd sh load mpi/mpich-x86_64 + eval LD_LIBRARY_PATH=/usr/lib64/mpich/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/mpich-x86_64' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/mpich:/usr/share/lmod/lmod/share/man::' ';export' 'MANPATH;MPI_BIN=/usr/lib64/mpich/bin' ';export' 'MPI_BIN;MPI_COMPILER=mpich-x86_64' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich-x86_64' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib64/mpich' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/mpich-x86_64' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib64/mpich/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/mpich' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/mpich' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_mpich' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/mpich-x86_64' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:/usr/lib64/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;PYTHONPATH=/usr/lib64/python2.7/site-packages/mpich' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/mpich-x86_64' ';export' '_LMFILES_;' ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ LOADEDMODULES=mpi/mpich-x86_64 ++ export LOADEDMODULES ++ MANPATH=/usr/share/man/mpich:/usr/share/lmod/lmod/share/man:: ++ export MANPATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ MPI_COMPILER=mpich-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich-x86_64 ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/mpich-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/mpich ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/mpich ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/mpich-x86_64 ++ export MPI_SYSCONFIG ++ PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ PYTHONPATH=/usr/lib64/python2.7/site-packages/mpich ++ export PYTHONPATH ++ _LMFILES_=/etc/modulefiles/mpi/mpich-x86_64 ++ export _LMFILES_ + export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + make -C mpich -j2 test make: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' Running tests... /usr/bin/ctest3 --force-new-ctest-process Test project /builddir/build/BUILD/lammps-stable_22Aug2018/mpich Start 1: ShowHelp 1/1 Test #1: ShowHelp ......................... Passed 0.03 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 0.03 sec make: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/mpich' + . /etc/profile.d/modules.sh ++++ /bin/ps -p 14161 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' mpi/mpich-x86_64 = '' ']' +++ '[' /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core = '' ']' + module unload mpi/mpich-x86_64 ++ /usr/bin/modulecmd sh unload mpi/mpich-x86_64 + eval MANPATH=/usr/share/lmod/lmod/share/man:: ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib64/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;' ++ MANPATH=/usr/share/lmod/lmod/share/man:: ++ export MANPATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ PKG_CONFIG_PATH=/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset LD_LIBRARY_PATH ++ unset LOADEDMODULES ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ unset PYTHONPATH ++ unset _LMFILES_ + . /etc/profile.d/modules.sh ++++ /bin/ps -p 14161 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' '' = '' ']' +++ LOADEDMODULES= +++ export LOADEDMODULES +++ '[' /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core = '' ']' + module load mpi/openmpi-x86_64 ++ /usr/bin/modulecmd sh load mpi/openmpi-x86_64 + eval LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/openmpi-x86_64' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man::' ';export' 'MANPATH;MPI_BIN=/usr/lib64/openmpi/bin' ';export' 'MPI_BIN;MPI_COMPILER=openmpi-x86_64' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib64/openmpi' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/openmpi-x86_64' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib64/openmpi/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/openmpi-x86_64' ';export' 'MPI_MAN;MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi' ';export' 'MPI_PYTHON2_SITEARCH;MPI_PYTHON3_SITEARCH=/usr/lib64/python3.4/site-packages/openmpi' ';export' 'MPI_PYTHON3_SITEARCH;MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_openmpi' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/openmpi-x86_64' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig:/usr/lib64/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64' ';export' '_LMFILES_;' ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ LOADEDMODULES=mpi/openmpi-x86_64 ++ export LOADEDMODULES ++ MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man:: ++ export MANPATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ MPI_COMPILER=openmpi-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/openmpi-x86_64 ++ export MPI_MAN ++ MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi ++ export MPI_PYTHON2_SITEARCH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.4/site-packages/openmpi ++ export MPI_PYTHON3_SITEARCH ++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 ++ export MPI_SYSCONFIG ++ PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64 ++ export _LMFILES_ + make -C openmpi -j2 test make: Entering directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' Running tests... /usr/bin/ctest3 --force-new-ctest-process Test project /builddir/build/BUILD/lammps-stable_22Aug2018/openmpi Start 1: ShowHelp 1/1 Test #1: ShowHelp ......................... Passed 1.11 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 1.12 sec make: Leaving directory `/builddir/build/BUILD/lammps-stable_22Aug2018/openmpi' + . /etc/profile.d/modules.sh ++++ /bin/ps -p 14161 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' mpi/openmpi-x86_64 = '' ']' +++ '[' /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core = '' ']' + module unload mpi/openmpi-x86_64 ++ /usr/bin/modulecmd sh unload mpi/openmpi-x86_64 + eval MANPATH=/usr/share/lmod/lmod/share/man:: ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib64/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON2_SITEARCH;unset' 'MPI_PYTHON3_SITEARCH;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' '_LMFILES_;' ++ MANPATH=/usr/share/lmod/lmod/share/man:: ++ export MANPATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ PKG_CONFIG_PATH=/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset LD_LIBRARY_PATH ++ unset LOADEDMODULES ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ unset _LMFILES_ + exit 0 Processing files: lammps-20180822-3.el7.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.UbzOPr + umask 022 + cd /builddir/build/BUILD + cd lammps-stable_22Aug2018 + DOCDIR=/builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/doc/lammps-20180822 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/doc/lammps-20180822 + cp -pr README /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/doc/lammps-20180822 + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.ogN4H1 + umask 022 + cd /builddir/build/BUILD + cd lammps-stable_22Aug2018 + LICENSEDIR=/builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/licenses/lammps-20180822 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/licenses/lammps-20180822 + cp -pr LICENSE /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/licenses/lammps-20180822 + exit 0 /usr/lib/rpm/mpi.prov: line 53: mpi_compiler_for_dir[${MPI_PYTHON2_SITEARCH}]: bad array subscript /usr/lib/rpm/mpi.req: line 55: mpi_compiler_for_dir[${MPI_PYTHON2_SITEARCH}]: bad array subscript Provides: lammps = 20180822-3.el7 lammps(x86-64) = 20180822-3.el7 liblammps.so.0()(64bit) Requires(interp): /sbin/ldconfig /sbin/ldconfig Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires(post): /sbin/ldconfig Requires(postun): /sbin/ldconfig Requires: libOpenCL.so.1()(64bit) libOpenCL.so.1(OPENCL_1.0)(64bit) libOpenCL.so.1(OPENCL_1.2)(64bit) libOpenCL.so.1(OPENCL_2.0)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.11)(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libfftw3.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(OMP_1.0)(64bit) libgomp.so.1(OMP_3.0)(64bit) libjpeg.so.62()(64bit) libjpeg.so.62(LIBJPEG_6.2)(64bit) liblammps.so.0()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libopenblas.so.0()(64bit) libpng15.so.15()(64bit) libpng15.so.15(PNG15_0)(64bit) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.2.5)(64bit) libpython3.4m.so.1.0()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libvoro++.so.0()(64bit) libz.so.1()(64bit) rtld(GNU_HASH) Processing files: lammps-openmpi-20180822-3.el7.x86_64 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.aY6oaD + umask 022 + cd /builddir/build/BUILD + cd lammps-stable_22Aug2018 + LICENSEDIR=/builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/licenses/lammps-openmpi-20180822 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/licenses/lammps-openmpi-20180822 + cp -pr LICENSE /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/licenses/lammps-openmpi-20180822 + exit 0 /usr/lib/rpm/mpi.prov: line 53: mpi_compiler_for_dir[${MPI_PYTHON2_SITEARCH}]: bad array subscript /usr/lib/rpm/mpi.req: line 55: mpi_compiler_for_dir[${MPI_PYTHON2_SITEARCH}]: bad array subscript /usr/lib/rpm/mpi.prov: line 53: mpi_compiler_for_dir[${MPI_PYTHON2_SITEARCH}]: bad array subscript /usr/lib/rpm/mpi.req: line 55: mpi_compiler_for_dir[${MPI_PYTHON2_SITEARCH}]: bad array subscript Provides: lammps-openmpi = 20180822-3.el7 lammps-openmpi(x86-64) = 20180822-3.el7 liblammps.so.0()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libOpenCL.so.1()(64bit) libOpenCL.so.1(OPENCL_1.0)(64bit) libOpenCL.so.1(OPENCL_1.2)(64bit) libOpenCL.so.1(OPENCL_2.0)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.11)(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libfftw3.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(OMP_1.0)(64bit) libgomp.so.1(OMP_3.0)(64bit) libjpeg.so.62()(64bit) libjpeg.so.62(LIBJPEG_6.2)(64bit) liblammps.so.0()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libmpi.so.40()(64bit) libmpi_cxx.so.40()(64bit) libopenblas.so.0()(64bit) libpng15.so.15()(64bit) libpng15.so.15(PNG15_0)(64bit) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.2.5)(64bit) libpython3.4m.so.1.0()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libvoro++.so.0()(64bit) libz.so.1()(64bit) rtld(GNU_HASH) Processing files: lammps-mpich-20180822-3.el7.x86_64 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.oIGvOf + umask 022 + cd /builddir/build/BUILD + cd lammps-stable_22Aug2018 + LICENSEDIR=/builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/licenses/lammps-mpich-20180822 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/licenses/lammps-mpich-20180822 + cp -pr LICENSE /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/licenses/lammps-mpich-20180822 + exit 0 /usr/lib/rpm/mpi.prov: line 53: mpi_compiler_for_dir[${MPI_PYTHON2_SITEARCH}]: bad array subscript /usr/lib/rpm/mpi.req: line 55: mpi_compiler_for_dir[${MPI_PYTHON2_SITEARCH}]: bad array subscript /usr/lib/rpm/mpi.prov: line 53: mpi_compiler_for_dir[${MPI_PYTHON2_SITEARCH}]: bad array subscript /usr/lib/rpm/mpi.req: line 55: mpi_compiler_for_dir[${MPI_PYTHON2_SITEARCH}]: bad array subscript Provides: lammps-mpich = 20180822-3.el7 lammps-mpich(x86-64) = 20180822-3.el7 liblammps.so.0()(64bit)(mpich-x86_64) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libOpenCL.so.1()(64bit) libOpenCL.so.1(OPENCL_1.0)(64bit) libOpenCL.so.1(OPENCL_1.2)(64bit) libOpenCL.so.1(OPENCL_2.0)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.11)(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libfftw3.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(OMP_1.0)(64bit) libgomp.so.1(OMP_3.0)(64bit) libjpeg.so.62()(64bit) libjpeg.so.62(LIBJPEG_6.2)(64bit) liblammps.so.0()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libmpich.so.10()(64bit) libmpichcxx.so.10()(64bit) libmpl.so.1()(64bit) libopa.so.1()(64bit) libopenblas.so.0()(64bit) libpng15.so.15()(64bit) libpng15.so.15(PNG15_0)(64bit) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.2.5)(64bit) libpython3.4m.so.1.0()(64bit) librt.so.1()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libvoro++.so.0()(64bit) libz.so.1()(64bit) rtld(GNU_HASH) Processing files: python34-lammps-20180822-3.el7.x86_64 Provides: python34-lammps = 20180822-3.el7 python34-lammps(x86-64) = 20180822-3.el7 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 3.4 Processing files: lammps-headers-20180822-3.el7.x86_64 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.aGWREU + umask 022 + cd /builddir/build/BUILD + cd lammps-stable_22Aug2018 + LICENSEDIR=/builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/licenses/lammps-headers-20180822 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/licenses/lammps-headers-20180822 + cp -pr LICENSE /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/licenses/lammps-headers-20180822 + exit 0 Provides: lammps-headers = 20180822-3.el7 lammps-headers(x86-64) = 20180822-3.el7 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: lammps-devel-20180822-3.el7.x86_64 /usr/lib/rpm/mpi.prov: line 53: mpi_compiler_for_dir[${MPI_PYTHON2_SITEARCH}]: bad array subscript Provides: lammps-devel = 20180822-3.el7 lammps-devel(x86-64) = 20180822-3.el7 pkgconfig(liblammps) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/pkg-config liblammps.so.0()(64bit) Processing files: lammps-mpich-devel-20180822-3.el7.x86_64 /usr/lib/rpm/mpi.prov: line 53: mpi_compiler_for_dir[${MPI_PYTHON2_SITEARCH}]: bad array subscript Provides: lammps-mpich-devel = 20180822-3.el7 lammps-mpich-devel(x86-64) = 20180822-3.el7 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: liblammps.so.0()(64bit)(mpich-x86_64) Processing files: lammps-openmpi-devel-20180822-3.el7.x86_64 /usr/lib/rpm/mpi.prov: line 53: mpi_compiler_for_dir[${MPI_PYTHON2_SITEARCH}]: bad array subscript Provides: lammps-openmpi-devel = 20180822-3.el7 lammps-openmpi-devel(x86-64) = 20180822-3.el7 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: liblammps.so.0()(64bit) Processing files: lammps-data-20180822-3.el7.noarch Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.6ONo9z + umask 022 + cd /builddir/build/BUILD + cd lammps-stable_22Aug2018 + LICENSEDIR=/builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/licenses/lammps-data-20180822 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/licenses/lammps-data-20180822 + cp -pr LICENSE /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64/usr/share/licenses/lammps-data-20180822 + exit 0 Provides: config(lammps-data) = 20180822-3.el7 lammps-data = 20180822-3.el7 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: lammps-debuginfo-20180822-3.el7.x86_64 Provides: lammps-debuginfo = 20180822-3.el7 lammps-debuginfo(x86-64) = 20180822-3.el7 Requires(rpmlib): rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 rpmlib(CompressedFileNames) <= 3.0.4-1 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64 Wrote: /builddir/build/RPMS/lammps-20180822-3.el7.x86_64.rpm Wrote: /builddir/build/RPMS/lammps-openmpi-20180822-3.el7.x86_64.rpm Wrote: /builddir/build/RPMS/lammps-mpich-20180822-3.el7.x86_64.rpm Wrote: /builddir/build/RPMS/python34-lammps-20180822-3.el7.x86_64.rpm Wrote: /builddir/build/RPMS/lammps-headers-20180822-3.el7.x86_64.rpm Wrote: /builddir/build/RPMS/lammps-devel-20180822-3.el7.x86_64.rpm Wrote: /builddir/build/RPMS/lammps-mpich-devel-20180822-3.el7.x86_64.rpm Wrote: /builddir/build/RPMS/lammps-openmpi-devel-20180822-3.el7.x86_64.rpm Wrote: /builddir/build/RPMS/lammps-data-20180822-3.el7.noarch.rpm Wrote: /builddir/build/RPMS/lammps-debuginfo-20180822-3.el7.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.wDJYZn + umask 022 + cd /builddir/build/BUILD + cd lammps-stable_22Aug2018 + /usr/bin/rm -rf /builddir/build/BUILDROOT/lammps-20180822-3.el7.x86_64 + exit 0 Finish: rpmbuild lammps-20180822-3.el7.src.rpm Finish: build phase for lammps-20180822-3.el7.src.rpm INFO: Done(/var/lib/copr-rpmbuild/results/lammps-20180822-3.el7.src.rpm) Config(child) 35 minutes 8 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run